X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=vv%2FvvToolBinarize.cxx;h=5cde3234b373ce4bc70ee972514b366b9dbdcfcd;hb=573d80d0f7a17607d2ee883c21c940c0ba020282;hp=0e584d1999dc4660da5c332ba2d2038d1b911509;hpb=870c69d4433f861755085ce2e398032223768a94;p=clitk.git

diff --git a/vv/vvToolBinarize.cxx b/vv/vvToolBinarize.cxx
index 0e584d1..5cde323 100644
--- a/vv/vvToolBinarize.cxx
+++ b/vv/vvToolBinarize.cxx
@@ -3,7 +3,7 @@
 
   Authors belong to:
   - University of LYON              http://www.universite-lyon.fr/
-  - Léon Bérard cancer center       http://oncora1.lyon.fnclcc.fr
+  - Léon Bérard cancer center       http://www.centreleonberard.fr
   - CREATIS CNRS laboratory         http://www.creatis.insa-lyon.fr
 
   This software is distributed WITHOUT ANY WARRANTY; without even
@@ -14,7 +14,7 @@
 
   - BSD        See included LICENSE.txt file
   - CeCILL-B   http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-  ======================================================================-====*/
+  ===========================================================================**/
 
 // vv
 #include "vvToolBinarize.h"
@@ -55,7 +55,6 @@ vvToolBinarize::vvToolBinarize(vvMainWindowBase * parent, Qt::WindowFlags f)
    vvToolBase<vvToolBinarize>(parent),
    Ui::vvToolBinarize()
 {
-  DD("Const binarize");
   // GUI Initialization
   Ui_vvToolBinarize::setupUi(mToolWidget);
   mInteractiveDisplayIsEnabled = mCheckBoxInteractiveDisplay->isChecked();
@@ -73,7 +72,7 @@ vvToolBinarize::vvToolBinarize(vvMainWindowBase * parent, Qt::WindowFlags f)
   mBGSlider->SetText("Background value");
 
   // Main filter
-  mFilter = new clitk::BinarizeImageGenericFilter;
+  mFilter = clitk::BinarizeImageGenericFilter::New();
 
   // Set how many inputs are needed for this tool
   AddInputSelector("Select one image", mFilter);
@@ -211,11 +210,11 @@ void vvToolBinarize::InputIsSelected(vvSlicerManager * m)
   mBGSlider->SetSingleStep(1);
 
   // VTK objects for interactive display
-  for(int i=0; i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
-    mImageContour.push_back(new vvImageContour);
+  for(int i=0; i<mCurrentSlicerManager->GetNumberOfSlicers(); i++) {
+    mImageContour.push_back(vvImageContour::New());
     mImageContour[i]->SetSlicer(mCurrentSlicerManager->GetSlicer(i));
     mImageContour[i]->SetColor(1.0, 0.0, 0.0);
-    mImageContourLower.push_back(new vvImageContour);
+    mImageContourLower.push_back(vvImageContour::New());
     mImageContourLower[i]->SetSlicer(mCurrentSlicerManager->GetSlicer(i));
     mImageContourLower[i]->SetColor(0.0, 0.0, 1.0);
   }
@@ -228,6 +227,8 @@ void vvToolBinarize::InputIsSelected(vvSlicerManager * m)
   connect(mCurrentSlicerManager,SIGNAL(UpdateTSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
 
   //  connect(mCurrentSlicerManager, SIGNAL(LeftButtonReleaseSignal(int)), SLOT(LeftButtonReleaseEvent(int)));
+  
+  InteractiveDisplayToggled(mInteractiveDisplayIsEnabled);
 }
 //------------------------------------------------------------------------------
 
@@ -235,7 +236,7 @@ void vvToolBinarize::InputIsSelected(vvSlicerManager * m)
 //------------------------------------------------------------------------------
 // void vvToolBinarize::LeftButtonReleaseEvent(int slicer) {
 //   DD("LeftButtonReleaseEvent");
-//   for(int i=0; i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
+//   for(int i=0; i<mCurrentSlicerManager->GetNumberOfSlicers(); i++) {
 //     if (i == slicer);
 //     mCurrentSlicerManager->GetSlicer(i)->GetRenderWindow()->Render();
 //   }
@@ -269,15 +270,11 @@ void vvToolBinarize::GetArgsInfoFromGUI()
      int good = cmdline_parser_ext(argc, argv, &args_info, &p);
      DD(good);
   */
-
-  mArgsInfo.imagetypes_flag = 0;
-  mArgsInfo.upper_given = 0;
-  mArgsInfo.lower_given = 0;
+  cmdline_parser_clitkBinarizeImage_init(&mArgsInfo); // Initialisation to default
   bool inverseBGandFG = false;
 
   mArgsInfo.lower_given = 1;
   mArgsInfo.lower_arg = mThresholdSlider1->GetValue();
-  // DD(mArgsInfo.lower_arg);
   if (mRadioButtonLowerThan->isChecked()) {
     mArgsInfo.upper_given = 1;
     mArgsInfo.upper_arg = mThresholdSlider2->GetValue();
@@ -304,12 +301,12 @@ void vvToolBinarize::GetArgsInfoFromGUI()
 
   mArgsInfo.verbose_flag = false;
 
-  // Required (even if not used)
-  mArgsInfo.input_given = 0;
-  mArgsInfo.output_given = 0;
+  // // Required (even if not used)
+  // mArgsInfo.input_given = 0;
+  // mArgsInfo.output_given = 0;
 
-  mArgsInfo.input_arg = new char;
-  mArgsInfo.output_arg = new char;
+  // mArgsInfo.input_arg = new char;
+  // mArgsInfo.output_arg = new char;
 }
 //------------------------------------------------------------------------------
 
@@ -326,7 +323,6 @@ void vvToolBinarize::apply()
     clitk::BinarizeImageGenericFilter::New();
   filter->SetInputVVImage(mCurrentImage);
   filter->SetArgsInfo(mArgsInfo);
-  filter->EnableReadOnDisk(false);
   filter->Update();
 
   // Output
@@ -347,7 +343,7 @@ void vvToolBinarize::valueChangedT2(double v)
   if (mRadioButtonLowerThan->isChecked()) {
     mThresholdSlider1->SetMaximum(v);
     if (!mInteractiveDisplayIsEnabled) return;
-    for(int i=0;i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
+    for(int i=0;i<mCurrentSlicerManager->GetNumberOfSlicers(); i++) {
       mImageContourLower[i]->Update(v);
     }
     mCurrentSlicerManager->Render();
@@ -364,7 +360,7 @@ void vvToolBinarize::valueChangedT1(double v)
   mThresholdSlider2->SetMinimum(v);
   //  int m1 = (int)lrint(v);
   if (!mInteractiveDisplayIsEnabled) return;
-  for(int i=0;i<mCurrentSlicerManager->NumberOfSlicers(); i++) {
+  for(int i=0;i<mCurrentSlicerManager->GetNumberOfSlicers(); i++) {
     mImageContour[i]->Update(v);
   }
   mCurrentSlicerManager->Render();