X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=blobdiff_plain;f=vv%2FvvToolRigidReg.cxx;h=a9fd2b5c78b899e276f1cb94910966adfe9401e0;hb=a9bddd3844a7b1fed036cbe9de2e1cc00b92598f;hp=ae1236e012736a9a44fc3add1033748ea70186e1;hpb=71e5a41c04015e6fc1df20d68b01d6f10588a717;p=clitk.git diff --git a/vv/vvToolRigidReg.cxx b/vv/vvToolRigidReg.cxx index ae1236e..a9fd2b5 100644 --- a/vv/vvToolRigidReg.cxx +++ b/vv/vvToolRigidReg.cxx @@ -70,6 +70,7 @@ vvToolRigidReg::vvToolRigidReg(vvMainWindowBase * parent, Qt::WindowFlags f): interpollabel->hide(); presetlabel->hide(); + // Set how many inputs are needed for this tool AddInputSelector("Select moving image",mFilter); AddInputSelector("Select fixed image",mFilter); @@ -113,29 +114,16 @@ void vvToolRigidReg::GetArgsInfoFromGUI() mMainWindow->GetInputPathName(), "Text (*.conf *.txt *.rtf *.doc)"); - DD(file.toStdString()); if (file.isEmpty()) return; QFile Qfile1(file); mConfigFile= file.toStdString(); CmdlineParser(1, 1);//1,1 - override, initialize - cb_transform->show(); - cb_metric->show(); - cb_interpolator->show(); - cb_optimizer->show(); - cb_selectoutput->show(); - translabel->show(); - metriclabel->show(); - outputlabel->show(); - optimlabel->show(); - interpollabel->show(); cb_transform->setCurrentIndex(mArgsInfo.transform_arg); cb_interpolator->setCurrentIndex(mArgsInfo.interp_arg); cb_optimizer->setCurrentIndex(mArgsInfo.optimizer_arg); cb_metric->setCurrentIndex(mArgsInfo.metric_arg); - DD(cb_transform->currentIndex()); - DD(mArgsInfo.transform_arg); } //------------------------------------------------------------------------------ @@ -143,6 +131,7 @@ void vvToolRigidReg::GetArgsInfoFromGUI() void vvToolRigidReg::Presets() { mConfigFile="Presets"; + std::string matrixfilename; if(cb_presets->currentIndex()==0) { mArgsInfo.reference_arg=new char; @@ -214,7 +203,8 @@ if(cb_presets->currentIndex()==0) mArgsInfo.rWeight_given=1.0; mArgsInfo.rWeight_arg=50.0; mArgsInfo.matrix_given=1; - mArgsInfo.matrix_arg="/home/bharath/bin/writematrix.txt"; + matrixfilename="/home/bharath/bin/writematrix.txt";//put ur path here for retreiving your matrix + mArgsInfo.matrix_arg=const_cast(matrixfilename.c_str()); UpdateTextEditor2(); } else { @@ -227,6 +217,7 @@ else { //------------------------------------------------------------------------------ void vvToolRigidReg::UpdateTextEditor2() { + QString str1,str2,str3; QColor color; tab2textedit->clear(); @@ -561,8 +552,13 @@ void vvToolRigidReg::UpdateTextEditor2() //------------------------------------------------------------------------------ void vvToolRigidReg::TransformSelect() { + if(!mConfigFile.empty()){ mArgsInfo.transform_arg=cb_transform->currentIndex(); UpdateTextEditor2(); + } + else{ + QMessageBox::information(this,"Warning","Load the Config File First!.."); + } } //------------------------------------------------------------------------------ @@ -611,32 +607,86 @@ void vvToolRigidReg::CmdlineParser(int override, int initialize) //------------------------------------------------------------------------------ void vvToolRigidReg::OptimizerSelect() { - mArgsInfo.optimizer_arg=cb_optimizer->currentIndex(); + if(!mConfigFile.empty()){ + mArgsInfo.optimizer_arg=cb_optimizer->currentIndex(); UpdateTextEditor2(); - + } + else{ + QMessageBox::information(this,"Warning","Load the Config File First!.."); + } } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ void vvToolRigidReg::InterpolatorSelect() { - mArgsInfo.interp_arg=cb_interpolator->currentIndex(); - UpdateTextEditor2(); + if(!mConfigFile.empty()){ + mArgsInfo.interp_arg=cb_interpolator->currentIndex(); + UpdateTextEditor2(); + } + else{ + QMessageBox::information(this,"Warning","Load the Config File First!.."); + } } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ void vvToolRigidReg::MetricSelect() { + if(!mConfigFile.empty()){ mArgsInfo.metric_arg=cb_metric->currentIndex(); UpdateTextEditor2(); + } + else{ + QMessageBox::information(this,"Warning","Load the Config File First!.."); + } } //------------------------------------------------------------------------------ //------------------------------------------------------------------------------ void vvToolRigidReg::OutputSelect() { - + std::ostringstream osstream; + if(!mConfigFile.empty()){ + if(cb_selectoutput->currentIndex()==0){ + mArgsInfo.output_given=0; + mArgsInfo.checker_after_given=0; + mArgsInfo.checker_before_given=0; + mArgsInfo.after_given=0; + mArgsInfo.before_given=0; + }//get transformed output image + if(cb_selectoutput->currentIndex()==1){ + mArgsInfo.output_given=0; + mArgsInfo.checker_after_given=1; + mArgsInfo.checker_before_given=0; + mArgsInfo.after_given=0; + mArgsInfo.before_given=0; + }//get checkered image after reg + if(cb_selectoutput->currentIndex()==2){ + mArgsInfo.output_given=0; + mArgsInfo.checker_after_given=0; + mArgsInfo.checker_before_given=1; + mArgsInfo.after_given=0; + mArgsInfo.before_given=0; + }//get checkered image before reg + if(cb_selectoutput->currentIndex()==3){ + mArgsInfo.output_given=0; + mArgsInfo.checker_after_given=0; + mArgsInfo.checker_before_given=0; + mArgsInfo.after_given=1; + mArgsInfo.before_given=0; + }//get difference image after reg + if(cb_selectoutput->currentIndex()==4){ + mArgsInfo.output_given=0; + mArgsInfo.checker_after_given=0; + mArgsInfo.checker_before_given=0; + mArgsInfo.after_given=0; + mArgsInfo.before_given=1; + }//get difference image before reg + } + else{ + QMessageBox::information(this,"Warning","Load the Config File First!.."); + } } //------------------------------------------------------------------------------ @@ -670,7 +720,6 @@ void vvToolRigidReg::InputIsSelected(std::vector & l) mInput2 = l[1]; UpdateTextEditor(mCurrentSlicerManager->GetImage()->GetTransform()->GetMatrix(),textEdit_2); - DD(*mCurrentSlicerManager->GetImage()->GetTransform()->GetMatrix()); for(int i =0;i<4;i++) { for(int j=0;j<4;j++) @@ -718,6 +767,9 @@ void vvToolRigidReg::InputIsSelected(std::vector & l) connect(loadbutton, SIGNAL(pressed()), this, SLOT(LoadFile())); connect(savebutton, SIGNAL(pressed()), this, SLOT(SaveFile())); + connect(checkBox_rigid, SIGNAL(clicked(bool)), this, SLOT(CheckRigidReg())); + connect(checkBox_deformable, SIGNAL(clicked(bool)), this, SLOT(CheckDeformableReg())); + connect(cb_presets, SIGNAL(activated(int)), this, SLOT(Presets())); connect(cb_transform, SIGNAL(activated(int)), this, SLOT(TransformSelect())); connect(cb_optimizer, SIGNAL(activated(int)), this, SLOT(OptimizerSelect())); @@ -736,6 +788,45 @@ void vvToolRigidReg::apply() } //------------------------------------------------------------------------------ +//------------------------------------------------------------------------------ +void vvToolRigidReg::CheckRigidReg() +{ + checkBox_deformable->setChecked(false); + cb_transform->show(); + cb_presets->show(); + cb_metric->show(); + cb_interpolator->show(); + cb_optimizer->show(); + cb_selectoutput->show(); + translabel->show(); + metriclabel->show(); + outputlabel->show(); + optimlabel->show(); + interpollabel->show(); + presetlabel->show(); + +} +//------------------------------------------------------------------------------ + +//------------------------------------------------------------------------------ +void vvToolRigidReg::CheckDeformableReg() +{ + checkBox_rigid->setChecked(false); + presetlabel->hide(); + cb_transform->show(); + cb_metric->show(); + cb_interpolator->show(); + cb_optimizer->show(); + cb_selectoutput->show(); + cb_presets->hide(); + translabel->show(); + metriclabel->show(); + outputlabel->show(); + optimlabel->show(); + interpollabel->show(); +} +//------------------------------------------------------------------------------ + //------------------------------------------------------------------------------ void vvToolRigidReg::SetOverlay(vvImage::Pointer Image) { @@ -752,12 +843,12 @@ void vvToolRigidReg::SetOverlay(vvImage::Pointer Image) void vvToolRigidReg::RemoveOverlay() { for(int i=0;iNumberOfSlicers();i++) - { - mInput1->RemoveActor("overlay",0); - mInput1->SetColorMap(0); - mInput1->Render(); - hide(); - } + { + mInput1->RemoveActor("overlay",0); + mInput1->SetColorMap(0); + mInput1->Render(); + hide(); + } } //------------------------------------------------------------------------------ @@ -945,13 +1036,25 @@ void vvToolRigidReg::AutoRegister() clitk::AffineRegistrationGenericFilter::New(); filter->SetInputVVImages(inputs); filter->SetArgsInfo(mArgsInfo); - DD("ArgsInfo given in"); filter->EnableReadOnDisk(false); filter->Update(); - vvImage::Pointer output = filter->GetOutputVVImage(); - //osstream << "Registered" << "_ " - // << mCurrentSlicerManager->GetSlicer(0)->GetFileName() << ".mhd"; - //AddImage(output,osstream.str()); + std::ostringstream osstream; + vvImage::Pointer output; + output = filter->GetOutputVVImage(); + SetOverlay(output); + + if(!cb_selectoutput->currentIndex()==0){ + std::string outputstring; + output = filter->GetOutputVVImages()[1]; + if(cb_selectoutput->currentIndex()==1){outputstring="Checkered_after_reg";} + if(cb_selectoutput->currentIndex()==2){outputstring="Checkered_before_reg";} + if(cb_selectoutput->currentIndex()==3){outputstring="Diff_after_reg";} + if(cb_selectoutput->currentIndex()==4){outputstring="Diff_before_reg";} + osstream << outputstring << mCurrentSlicerManager->GetSlicer(0)->GetFileName() << ".mhd"; + AddImage(output,osstream.str()); + filter->DeleteLastOutputImage(); + } + DD(filter->GetOutputVVImages().capacity()); QApplication::restoreOverrideCursor(); ReadFile(true); }