gdcm::Tag tcsq(0x3006,0x0040);
if( !nestedds.FindDataElement( tcsq ) )
{
+ std::cerr << "Warning. Could not read contour for structure <" << mName << ">, number" << mNumber << " ? I ignore it" << std::endl;
+ return;
}
const gdcm::DataElement& csq = nestedds.GetDataElement( tcsq );
gdcm::SmartPointer<gdcm::SequenceOfItems> sqi2 = csq.GetValueAsSQ();
double last_z=0;
for(unsigned int i = 0; i < nitems; ++i)
{
- const gdcm::Item & j = sqi2->GetItem(i+1); // Item start at #1
- DicomRT_Contour::Pointer c = DicomRT_Contour::New();
- bool b = c->Read(j);
- if (b) {
- mListOfContours.push_back(c);
- if (contour_processed) {
- double delta=c->GetZ() - last_z;
- if (delta_computed)
- assert(mZDelta == delta);
- else
- mZDelta = delta;
- } else
- contour_processed=true;
- last_z=c->GetZ();
+ const gdcm::Item & j = sqi2->GetItem(i+1); // Item start at #1
+ DicomRT_Contour::Pointer c = DicomRT_Contour::New();
+ bool b = c->Read(j);
+ if (b) {
+ mListOfContours.push_back(c);
+ if (contour_processed) {
+ double delta=c->GetZ() - last_z;
+ if (delta_computed)
+ assert(mZDelta == delta);
+ else
+ mZDelta = delta;
+ } else
+ contour_processed=true;
+ last_z=c->GetZ();
+ }
}
- }
}
#else
// Read contours [Contour Sequence]
gdcm::SeqEntry * contours=item->GetSeqEntry(0x3006,0x0040);
- bool contour_processed=false;
- bool delta_computed=false;
- double last_z=0;
- for(gdcm::SQItem* j=contours->GetFirstSQItem(); j!=0; j=contours->GetNextSQItem()) {
- DicomRT_Contour::Pointer c = DicomRT_Contour::New();
- bool b = c->Read(j);
- if (b) {
- mListOfContours.push_back(c);
- if (contour_processed) {
- double delta=c->GetZ() - last_z;
- if (delta_computed)
- assert(mZDelta == delta);
- else
- mZDelta = delta;
- } else
- contour_processed=true;
- last_z=c->GetZ();
+ if (contours) {
+ bool contour_processed=false;
+ bool delta_computed=false;
+ double last_z=0;
+ for(gdcm::SQItem* j=contours->GetFirstSQItem(); j!=0; j=contours->GetNextSQItem()) {
+ DicomRT_Contour::Pointer c = DicomRT_Contour::New();
+ bool b = c->Read(j);
+ if (b) {
+ mListOfContours.push_back(c);
+ if (contour_processed) {
+ double delta=c->GetZ() - last_z;
+ if (delta_computed)
+ assert(mZDelta == delta);
+ else
+ mZDelta = delta;
+ } else
+ contour_processed=true;
+ last_z=c->GetZ();
+ }
}
}
+ else {
+ std::cerr << "Warning. Could not read contour for structure <" << mName << ">, number" << mNumber << " ? I ignore it" << std::endl;
+ }
}
#endif
//--------------------------------------------------------------------