+++ /dev/null
-//=====
-// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
-//=====
-#include "bbcreaVtkHeartAngles.h"
-#include "bbcreaVtkPackage.h"
-#include "creaVtkHeartAngles.h"
-
-namespace bbcreaVtk
-{
-
-BBTK_ADD_BLACK_BOX_TO_PACKAGE(creaVtk,HeartAngles)
-BBTK_BLACK_BOX_IMPLEMENTATION(HeartAngles,bbtk::AtomicBlackBox);
-//=====
-// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
-//=====
-void HeartAngles::Process()
-{
- std::cout << "CFT HeartAngles::Process() Start"<<std::endl;
- creaVtkHeartAngles ha;
-
- //ha.calculateImages (bbGetInputImage(), bbGetInputPlanePoint()[0], bbGetInputPlanePoint()[1], bbGetInputPlanePoint()[2], bbGetInputVector()[0], bbGetInputVector()[1], bbGetInputVector()[2], bbGetInputNormal()[0], bbGetInputNormal()[1], bbGetInputNormal()[2], bbGetInputPoint2()[0], bbGetInputPoint2()[1], bbGetInputPoint2()[2]);
-// bbSetOutputAlphaImage(ha.getAlphaImage());
- double p2x = bbGetInputNormal()[0]+ bbGetInputPlanePoint()[0];
- double p2y = bbGetInputNormal()[1]+ bbGetInputPlanePoint()[1];
- double p2z = bbGetInputNormal()[2]+ bbGetInputPlanePoint()[2];
-
- double Nx = bbGetInputNormal()[0];
- double Ny = bbGetInputNormal()[1];
- double Nz = bbGetInputNormal()[2];
-
- double Px = bbGetInputPlanePoint()[0];
- double Py = bbGetInputPlanePoint()[1];
- double Pz = bbGetInputPlanePoint()[2];
-
- ha.calculateImages (bbGetInputImage(), Px, Py, Pz, Nx, Ny, Nz, p2x, p2y, p2z);
- bbSetOutputAlphaImage(ha.getAlphaImage());
- bbSetOutputBetaImage(ha.getBetaImage());
- std::cout << "CFT HeartAngles::Process() End"<<std::endl;
-}
-//=====
-// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
-//=====
-void HeartAngles::bbUserSetDefaultValues()
-{
-
-}
-//=====
-// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
-//=====
-void HeartAngles::bbUserInitializeProcessing()
-{
-
-// THE INITIALIZATION METHOD BODY :
-// Here does nothing
-// but this is where you should allocate the internal/output pointers
-// if any
-
-
-}
-//=====
-// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
-//=====
-void HeartAngles::bbUserFinalizeProcessing()
-{
-
-// THE FINALIZATION METHOD BODY :
-// Here does nothing
-// but this is where you should desallocate the internal/output pointers
-// if any
-
-}
-}
-// EO namespace bbcreaVtk
-
-
+++ /dev/null
-//=====
-// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
-//=====
-#ifndef __bbcreaVtkHeartAngles_h_INCLUDED__
-#define __bbcreaVtkHeartAngles_h_INCLUDED__
-#include "bbcreaVtk_EXPORT.h"
-#include "bbtkAtomicBlackBox.h"
-#include "iostream"
-#include "vtkImageData.h"
-#include <vector>
-namespace bbcreaVtk
-{
-
-class bbcreaVtk_EXPORT HeartAngles
- :
- public bbtk::AtomicBlackBox
-{
- BBTK_BLACK_BOX_INTERFACE(HeartAngles,bbtk::AtomicBlackBox);
-
-//vtkImageData* image, double Px, double Py, double Pz, double Vx, double Vy, double Vz, double Nx, double Ny, double Nz, double p2x, double p2y, double p2z
- BBTK_DECLARE_INPUT(Image, vtkImageData*);
- BBTK_DECLARE_INPUT(PlanePoint,std::vector<double>);
- BBTK_DECLARE_INPUT(Vector,std::vector<double>);
- BBTK_DECLARE_INPUT(Normal,std::vector<double>);
- BBTK_DECLARE_INPUT(Point2,std::vector<double>);
- BBTK_DECLARE_OUTPUT(AlphaImage, vtkImageData*);
- BBTK_DECLARE_OUTPUT(BetaImage, vtkImageData*);
- BBTK_PROCESS(Process);
- void Process();
-//=====
-// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
-//=====
-};
-
-BBTK_BEGIN_DESCRIBE_BLACK_BOX(HeartAngles,bbtk::AtomicBlackBox);
-BBTK_NAME("HeartAngles");
-BBTK_AUTHOR("carlos torres");
-BBTK_DESCRIPTION("No Description.");
-BBTK_CATEGORY("empty");
-BBTK_INPUT(HeartAngles,Image,"Image",vtkImageData*,"");
-BBTK_INPUT(HeartAngles,PlanePoint,"Punto en el plano componente X",std::vector<double>,"");
-BBTK_INPUT(HeartAngles,Vector,"Vector componente X",std::vector<double>,"");
-BBTK_INPUT(HeartAngles,Normal,"Normal componente X",std::vector<double>,"");
-BBTK_INPUT(HeartAngles,Point2,"Punto P2 componente X",std::vector<double>,"");
-BBTK_OUTPUT(HeartAngles,AlphaImage,"Alpha Image",vtkImageData*,"");
-BBTK_OUTPUT(HeartAngles,BetaImage,"Beta Image",vtkImageData*,"");
-BBTK_END_DESCRIBE_BLACK_BOX(HeartAngles);
-//=====
-// Before editing this file, make sure it's a file of your own (i.e.: it wasn't generated from xml description; if so : your modifications will be lost)
-//=====
-}
-// EO namespace bbcreaVtk
-
-#endif // __bbcreaVtkHeartAngles_h_INCLUDED__
-
+++ /dev/null
-/*
-# ---------------------------------------------------------------------
-#
-# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
-# pour la Sante)
-# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
-# Previous Authors : Laurent Guigues, Jean-Pierre Roux
-# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
-#
-# This software is governed by the CeCILL-B license under French law and
-# abiding by the rules of distribution of free software. You can use,
-# modify and/ or redistribute the software under the terms of the CeCILL-B
-# license as circulated by CEA, CNRS and INRIA at the following URL
-# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-# or in the file LICENSE.txt.
-#
-# As a counterpart to the access to the source code and rights to copy,
-# modify and redistribute granted by the license, users are provided only
-# with a limited warranty and the software's author, the holder of the
-# economic rights, and the successive licensors have only limited
-# liability.
-#
-# The fact that you are presently reading this means that you have had
-# knowledge of the CeCILL-B license and that you accept its terms.
-# ------------------------------------------------------------------------
-*/
-
-#include "creaVtkHeartAngles.h"
-#include <math.h>
-#include <iostream>
-#include "vtkDoubleArray.h"
-#include "vtkStructuredPoints.h"
-#include "vtkPointData.h"
-#include "vtkDataArray.h"
-
-creaVtkHeartAngles::creaVtkHeartAngles()
-{
-}
-
-creaVtkHeartAngles::~creaVtkHeartAngles()
-{
-}
-
-vtkImageData* creaVtkHeartAngles::getAlphaImage ()
-{
- return alphaImage;
-}
-
-vtkImageData* creaVtkHeartAngles::getBetaImage ()
-{
- return betaImage;
-};
-
-double creaVtkHeartAngles::alpha (double P0a, double P0b,double P0c, double vx, double vy, double vz, double vxp, double vyp, double vzp)
-{
- double a=P0a,b=P0b,c=P0c;
- double x=vx,y=vy,z=vz;
- double xp=vxp,yp=vyp,zp=vzp;
- double alpha;
-
- //Calcular el ángulo que forman las rectas, sabiendo sus vectores directores.
- //double cosAlpha = ( ( (x-a)*(xp-a) )+( (y-b)*(yp-b) )+( (z-c)*(zp-c) ) )/sqrt((( (pow(x,2.0)-pow(a,2.0)) + (pow(y,2.0)-pow(b,2.0)) + (pow(z,2.0)-pow(c,2.0)) )*( (pow(xp,2.0)-pow(a,2.0)) + (pow(yp,2.0)-pow(b,2.0)) + (pow(zp,2.0)-pow(c,2.0)) ) ));
- double cosAlpha = ( ( x*xp )+( y*yp )+( z*zp ) )/(sqrt( pow(x,2.0) + pow(y,2.0) + pow(z,2.0) )*sqrt ( pow(xp,2.0) + pow(yp,2.0) + pow(zp,2.0) ) );
-
- alpha = (180 * acos(fabs(cosAlpha)))/M_PI;
- /*if((alpha<=90)&&(alpha>=0)){
- std::cout << " " << a << " " << b <<" " << c <<" " << x <<" " << y <<" " << z <<" " << xp <<" " << yp <<" " << zp;
- std::cout << " cosAlpha: " << cosAlpha;
- std::cout << " acos(fabs(cosalpha)) " << acos(fabs(cosAlpha));
- std::cout << " Angulo Alpha: " << alpha << std::endl ; }*/
- double ent = floor(alpha);
- double al = alpha - ent;
- double min = al * 60;
- //std::cout << "minutos: " << min << std::endl;
- //std::cout << "Alpha grados: "<< ent <<" minutos: " << floor(min) << " cos: " << cosAlpha << std::endl;
- return alpha;
-}
-
-double creaVtkHeartAngles::beta (double P0a, double P0b,double P0c, double P3x, double P3y, double P3z, double P4x, double P4y, double P4z)
-{
- double a=P0a,b=P0b,c=P0c;
- double x=P3x,y=P3y,z=P3z;
- double xp=P4x,yp=P4y,zp=P4z;
- double beta;
-
- //Calcular el ángulo que forman las rectas, sabiendo sus vectores directores.
- //double cosBeta = ( ( (x-a)*(xp-a) )+( (y-b)*(yp-b) )+( (z-c)*(zp-c) ) )/sqrt((( (pow(x,2.0)-pow(a,2.0)) + (pow(y,2.0)-pow(b,2.0)) + (pow(z,2.0)-pow(c,2.0)) )*( (pow(xp,2.0)-pow(a,2.0)) + (pow(yp,2.0)-pow(b,2.0)) + (pow(zp,2.0)-pow(c,2.0)) ) ));
- double cosBeta = ( ( x*xp )+( y*yp )+( z*zp ) )/(sqrt( pow(x,2.0) + pow(y,2.0) + pow(z,2.0) )*sqrt ( pow(xp,2.0) + pow(yp,2.0) + pow(zp,2.0) ) );
- beta = (180 * acos(fabs(cosBeta)))/M_PI;
- //std::cout << "Angulo Beta: " << beta << std::endl;
- double ent = floor(beta);
- double al = beta - ent;
- double min = al * 60;
- //std::cout << "minutos: " << min << std::endl;
- //std::cout << "Beta grados: "<< ent <<" minutos: " << floor(min) << " cos: " << cosBeta << std::endl;
- return beta;
-}
-
-double * creaVtkHeartAngles::vectorProjection (double nX, double nY, double nZ, double vX, double vY, double vZ)
-{
-
- //normalPlano
- double nx=nX, ny=nY, nz=nZ;
- //vector V
- double vx=vX, vy=vY, vz=vZ;
-
- //vector proyectado
- double proj [3];
-
- proj[0]= vX - (nX*vX);
- proj[1]= vY - (nY*vY);
- proj[2]= vZ - (nZ*vZ);
-
- return proj;
-}
-
-double *creaVtkHeartAngles::intersectionPlaneLine(double plx1, double ply1, double plz1, double plx2, double ply2, double plz2, double plx3, double ply3, double plz3, double px1, double py1, double pz1,double px2, double py2, double pz2)
-{
- double puntoCorte[3];
-
- double Plx1 = plx1, Ply1 = ply1, Plz1 = plz1, Plx2 = plx2, Ply2 = ply2, Plz2 = plz2, Plx3 = plx3, Ply3 = ply3, Plz3 = plz3;
- double Px1 = px1, Py1 = py1, Pz1 = pz1, Px2 = px2, Py2 = py2, Pz2 = pz2;
-
- //Calculo del plano
-
- double aX = ((Ply2-Ply1)*(Plz3-Plz1)-(Ply3-Ply1)*(Plz2-Plz1));
- double a = (Plx1)*((Ply2-Ply1)*(Plz3-Plz1)-(Ply3-Ply1)*(Plz2-Plz1));
-
- double bX = ((Plx2-Plx1)*(Plz3-Plz1)-(Plx3-Plx1)*(Plz2-Plz1));
- double b = (Ply1)*((Plx2-Plx1)*(Plz3-Plz1)-(Plx3-Plx1)*(Plz2-Plz1));
-
- double cX = ((Plx2-Plx1)*(Ply3-Ply1)-(Plx3-Plx1)*(Ply2-Ply1));
- double c = (Plz1)*((Plx2-Plx1)*(Ply3-Ply1)-(Plx3-Plx1)*(Ply2-Ply1));
-
- double r = a + b + c;
- std::cout << "ecuacion: " << aX << "," << a << "," << bX << "," << b << "," << cX << "," << c << std::endl;
- std::cout << "r: " << r << std::endl;
-
- //Calculo del vector director
-
- double vdirx = Px2 - Px1;
- double vdiry = Py2 - Py1;
- double vdirz = Pz2 - Pz1;
-
- std::cout << "vdirx: " << vdirx << " vdiry: " << vdiry << " vdirz: " << vdirz << std::endl;
-
- //Se igualan las formulas del plano y la recta
- //x=Px1+vdirx, y=Py1+vdiry, z=Pz1+vdirz
-
- double eRes = aX*Px1 + bX*Py1 + cX*Pz1;
- double eResT = aX*vdirx + bX*vdiry + cX*vdirz;
- std::cout << "eRes: " << eRes << " eResT: " << eResT << std::endl;
- //Calculo del punto solucion
- if(eResT == 0){
- std::cout << "Soluciones infinitas... " << std::endl;
- }
- else {
- double t = (((-1)*eRes)-r)/eResT;
-
- double Px = Px1 + (t * vdirx);
- double Py = Py1 + (t * vdiry);
- double Pz = Pz1 + (t * vdirz);
-
- std::cout << "px: " << Px << " py: " << Py << " pz: " << Pz << std::endl;
-
- puntoCorte[0] = Px;
- puntoCorte[1] = Py;
- puntoCorte[2] = Pz;
- }
- return puntoCorte;
-}
-
-void creaVtkHeartAngles::calculateImages (vtkImageData* image, double Px, double Py, double Pz, double Nx, double Ny, double Nz, double p2x, double p2y, double p2z)
-{
-std::cout << "CFT creaVtkHeartAngles::calculateImages Start"<<std::endl;
-
- alphaImage = vtkImageData::New();
- alphaImage->SetExtent( image->GetExtent() );
- alphaImage->SetOrigin( image->GetOrigin() );
- alphaImage->SetSpacing( image->GetSpacing() );
- alphaImage->SetScalarTypeToUnsignedChar();
- alphaImage->SetNumberOfScalarComponents( image->GetNumberOfScalarComponents() );
- alphaImage->AllocateScalars();
-
- int ext[6];
- image->GetWholeExtent(ext);
- int dim[3];
- dim[0]=ext[1]-ext[0]+1;
- dim[1]=ext[3]-ext[2]+1;
- dim[2]=ext[5]-ext[4]+1;
-
- std::cout<<"dim0 "<<dim[0]<<" dim1 "<<dim[1]<<" dim2 "<<dim[2]<<std::endl;
-
- betaImage = vtkImageData::New();
- betaImage->SetExtent( image->GetExtent() );
- betaImage->SetWholeExtent( image->GetWholeExtent() );
- betaImage->SetOrigin( image->GetOrigin() );
- betaImage->SetSpacing( image->GetSpacing() );
- betaImage->SetScalarTypeToUnsignedChar();
- betaImage->SetNumberOfScalarComponents( image->GetNumberOfScalarComponents() );
- betaImage->AllocateScalars();
-
- unsigned char* pPix;
- pPix = (unsigned char*)image->GetScalarPointer();
- double a;
- double b;
-
- int numberOfPoints = dim[0]*dim[1]*dim[2];
-
- vtkDoubleArray *array;
- array = (vtkDoubleArray*) image->GetPointData()->GetVectors();
- //for(int i = 0 ; i < 8600 ; i++) {
- // std::cout<<" arreglo #"<< i << " "<< array->GetValue(i)<<" tuple3 "<< array->GetTuple3(i)[0]<<" "<< array->GetTuple3(i)[1]<<" "<<array->GetTuple3(i)[2]<< std::endl;
- //}
-
- int i, j, k;
- int numTuple=0;
-
-
- for( k = 0 ; k < dim[2] ; k++ )
- {
- for( j = 0 ; j < dim[1] ; j++ )
- {
- for( i = 0 ; i < dim[0] ; i++ )
- {
- //unsigned char* pPix = (unsigned char *)image->GetScalarPointer( i , j , k );
-
- double p1 = array->GetTuple3(numTuple)[0];
- double p2 = array->GetTuple3(numTuple)[1];
- double p3 = array->GetTuple3(numTuple)[2];
- numTuple++;
-
- //std::cout << " p1: " << p1 << " p2: " << p2 <<" p3: " << p3 << std::endl;
- //std::cout << " Px: " << Px << " Py: " << Py <<" Pz: " << Pz << std::endl;
- //std::cout << " p2x: " << p2x << " p2y: " << p2y <<" p2z: " << p2z << std::endl;
-
- double* vecProj;
- vecProj = vectorProjection (Nx, Ny, Nz, p1, p2, p3);
- //std::cout << " vecProj[0]: " << vecProj[0] << " vecProj[1]: " << vecProj[1] <<" vecProj[2]: " << vecProj[2] << std::endl;
- a = alpha (Px, Py, Pz,
- p1, p2, p3,
- vecProj[0], vecProj[1], vecProj[2]);
-
- b = beta (Px, Py, Pz,
- p2x, p2y, p2z,
- vecProj[0], vecProj[1], vecProj[2]);
-
- //if(a>=90&&a<=360) { std::cout << " numTuple: " << numTuple << " a: " << a << " b: " << b << std::endl; }
- if(p1==0&&p2==0&&p3==0){
- unsigned char *zPtr1 = (unsigned char *) alphaImage->GetScalarPointer( i , j , k );
- *zPtr1 = (unsigned char)0;
- unsigned char *zPtr2 = (unsigned char *) betaImage->GetScalarPointer( i , j , k );
- *zPtr2 = (unsigned char)0;
- }else{
- unsigned char *zPtr1 = (unsigned char *) alphaImage->GetScalarPointer( i , j , k );
- *zPtr1 = (unsigned char)a;
- unsigned char *zPtr2 = (unsigned char *) betaImage->GetScalarPointer( i , j , k );
- *zPtr2 = (unsigned char)b;
- }
- } //for i
- } // for j
- } // for k
-
-std::cout << "CFT creaVtkHeartAngles::calculateImages End"<<std::endl;
-}
-
-
-
+++ /dev/null
-/*
-# ---------------------------------------------------------------------
-#
-# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
-# pour la Sante)
-# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
-# Previous Authors : Laurent Guigues, Jean-Pierre Roux
-# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
-#
-# This software is governed by the CeCILL-B license under French law and
-# abiding by the rules of distribution of free software. You can use,
-# modify and/ or redistribute the software under the terms of the CeCILL-B
-# license as circulated by CEA, CNRS and INRIA at the following URL
-# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-# or in the file LICENSE.txt.
-#
-# As a counterpart to the access to the source code and rights to copy,
-# modify and redistribute granted by the license, users are provided only
-# with a limited warranty and the software's author, the holder of the
-# economic rights, and the successive licensors have only limited
-# liability.
-#
-# The fact that you are presently reading this means that you have had
-# knowledge of the CeCILL-B license and that you accept its terms.
-# ------------------------------------------------------------------------
-*/
-
-#ifndef _CREAVTKHEARTANGLES_H_
-#define _CREAVTKHEARTANGLES_H_
-#include "vtkImageData.h"
-
-class creaVtkHeartAngles
-{
-
-public :
- creaVtkHeartAngles();
- ~creaVtkHeartAngles();
- vtkImageData* getAlphaImage ();
- vtkImageData* getBetaImage ();
- //Parametros: Punto P0, vector V, Vector V'(proyection de V)
- double alpha (double P0a, double P0b,double P0c, double vx, double vy, double vz, double vxp, double vyp, double vzp);
- //Parametros: Punto P0, Punto P2, Punto P4 (proyection de V)
- double beta (double P0a, double P0b,double P0c, double P2x, double P2y, double P2z, double P4x, double P4y, double P4z);
- //Parametros: normalPlano, vector V.
- double * vectorProjection (double nx, double ny, double nz, double vx, double vy, double vz);
- //Parametros: Tres puntos del plano, dos puntos de la recta.
- double *intersectionPlaneLine(double plx1, double ply1, double plz1, double plx2, double ply2, double plz2, double plx3, double ply3, double plz3, double px1, double py1, double pz1,double px2, double py2, double pz2);
- //Parametros: Imagen 3D, Punto en el plano, Normal, p2.
- void calculateImages (vtkImageData* image, double Px, double Py, double Pz, double Nx, double Ny, double Nz, double p2x, double p2y, double p2z);
-
-protected:
-
-private:
- vtkImageData* alphaImage;
- vtkImageData* betaImage;
-};
-
-//-end of _CREAVTKHEARTANGLES_H_------------------------------------------------------
-#endif
git://git.creatis.insa-lyon.fr / creaVtk.git / commitdiff