# We need to test the reading of all dicom images in the gdcmData directory
# First parse this directory and extract all images
-# For now only *.dcm will be picked up, since there is a bug in cmake 1.8.3
-# and I don't know how to work around
-FILE(GLOB GDCM_DATA_IMAGES_GLOB
+# Since there is a bug in cmake 1.8.3, I'll have to do two separate globs
+FILE(GLOB GDCM_DATA_IMAGES_GLOB_ACR
+ "${GDCM_DATA_ROOT}/*.acr"
+ )
+
+FILE(GLOB GDCM_DATA_IMAGES_GLOB_DCM
"${GDCM_DATA_ROOT}/*.dcm"
-# "${GDCM_DATA_ROOT}/*.acr"
)
+# Black list of images know to break lots of readers (efilm, xmedcon ...):
+SET(BLACK_LIST
+ "gdcm-JPEG-LossLessThoravision.dcm"
+ )
+
+SET(GDCM_DATA_IMAGES_GLOB ${GDCM_DATA_IMAGES_GLOB_DCM} ${GDCM_DATA_IMAGES_GLOB_ACR})
+
# This is a GLOB expression, change it into a list separated with a comma and \n
SET(GDCM_DATA_IMAGES)
FOREACH(filename ${GDCM_DATA_IMAGES_GLOB})
- SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename}\",")
+ GET_FILENAME_COMPONENT(filename_temp ${filename} NAME)
+ #MESSAGE(STATUS ${filename_temp})
+ STRING(COMPARE EQUAL ${BLACK_LIST} ${filename_temp} bad_dicom)
+ #MESSAGE(STATUS ${bad_dicom})
+ IF(NOT bad_dicom)
+ SET(GDCM_DATA_IMAGES "${GDCM_DATA_IMAGES}\n\"${filename}\",")
+ ENDIF(NOT bad_dicom)
ENDFOREACH(filename)
# Populate GDCM_DATA_IMAGES: