+2005-02-09 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
+ * Test/ : accelerate tests (it's not very significant accelerations).
+ Remove TestCopyDicom that is redundant with TestCopyRescaleDicom
+
2005-02-07 Benoit Regrain <Benoit.Regrain@creatis.insa-lyon.fr>
* Testing/TestSequence.cxx : add test for sequences of images... test that
we have the same serie or the same study UID
TestHash.cxx
TestTS.cxx
TestVR.cxx
- TestDicomDirElement.cxx
- TestDicomString.cxx
TestDict.cxx
TestWriteSimple.cxx
TestSequence.cxx
+ TestDicomDirElement.cxx
+ TestDicomString.cxx
)
# add tests that require data
IF (GDCM_DATA_ROOT)
SET(TEST_SOURCES ${TEST_SOURCES}
TestFileAccessors.cxx
- TestReadWriteReadCompare.cxx # includes generated gdcmDataImages.h
TestPrintAllDocument.cxx # includes generated gdcmDataImages.h
- TestAllReadCompareDicom.cxx # includes generated gdcmDataImages.h
TestAllEntryVerify.cxx # includes generated gdcmDataImages.h
- #TestChangeHeader.cxx
- TestCopyDicom.cxx # includes generated gdcmDataImages.h
+ TestAllReadCompareDicom.cxx # includes generated gdcmDataImages.h
+ TestReadWriteReadCompare.cxx # includes generated gdcmDataImages.h
+ #TestCopyDicom.cxx # includes generated gdcmDataImages.h
TestCopyRescaleDicom.cxx # includes generated gdcmDataImages.h
+ #TestChangeHeader.cxx
+ TestDirList.cxx
TestDicomDir.cxx # require DICOMDIR
TestBuildUpDicomDir.cxx # writes a file named "NewDICOMDIR"
TestMakeDicomDir.cxx # writes a file named "NewDICOMDIR"
- TestDirList.cxx
TestSerieHelper.cxx # uses gdcmData as a default root directory
)
# add test that require VTK:
Program: gdcm
Module: $RCSfile: TestCopyRescaleDicom.cxx,v $
Language: C++
- Date: $Date: 2005/02/03 10:00:06 $
- Version: $Revision: 1.14 $
+ Date: $Date: 2005/02/09 15:06:48 $
+ Version: $Revision: 1.15 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
copyF->InsertValEntry( "8", 0x0028, 0x0101); // Bits Stored
copyF->InsertValEntry( "7", 0x0028, 0x0102); // High Bit
copyF->InsertValEntry( "0", 0x0028, 0x0103); // Pixel Representation
-
+
// We assume the value were from 0 to uint16_t max
rescaleSize = dataSize / 2;
rescaleImage = new uint8_t[dataSize];
uint16_t *imageData16 = (uint16_t*)original->GetImageData();
+ uint16_t *tmpImage = imageData16;
+ uint8_t *tmpRescale = rescaleImage;
for(unsigned int i=0; i<rescaleSize; i++)
{
- rescaleImage[i] = imageData16[i]/256;
+ *tmpRescale = (*tmpImage)>>8;
+ tmpImage++;
+ tmpRescale++;
}
}
else
Program: gdcm
Module: $RCSfile: TestReadWriteReadCompare.cxx,v $
Language: C++
- Date: $Date: 2005/02/02 10:05:26 $
- Version: $Revision: 1.21 $
+ Date: $Date: 2005/02/09 15:06:48 $
+ Version: $Revision: 1.22 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
std::cout << " step 1...";
//////////////// Step 2:
-
gdcm::FileHelper *filehelper = new gdcm::FileHelper( file );
int dataSize = filehelper->GetImageDataSize();
uint8_t *imageData = filehelper->GetImageData(); //EXTREMELY IMPORTANT
// GetImageData or if he wants to GetImageDataRaw
// (even if we do it by setting a flag, he will have to decide)
- /// \todo Following line commented out because gdcmFile::SetImageData() is
- /// brain dead: it sets ImageDataSize to its argument and PixelRead to a.
- /// Later on, when writing gdcmFile::WriteBase()
- /// and because PixelRead == 1 we call
- /// PixelElement->SetLength( ImageDataSizeRaw );
- /// where we use ImageDataSizeRAW instead of ImageDataSize !
- /// But when the original image made the transformation LUT -> RGB,
- /// ImageDataSizeRaw is the third of ImageDataSize, and there is no
- /// reason (since we called gdcmFile::SetImageData) to use the Raw image
- /// size... This "bug" in gdcmFile made that we had to black list
- /// images 8BitsUncompressedColor.dcm, OT-PAL-8-face.dcm and
- /// US-PAL-8-10x-echo.dcm...
- /// In conclusion fix gdcmFile, and then uncomment the following line.
-
- // --> I did. ctest doesn't break. But ... is it enought to say it's OK ?
-
- filehelper->SetImageData(imageData, dataSize);
+ //filehelper->SetImageData(imageData, dataSize);
filehelper->SetWriteModeToRGB();
filehelper->WriteDcmExplVR( output );
std::cout << "2...";
//////////////// Step 3:
-
gdcm::FileHelper *reread = new gdcm::FileHelper( output );
if( !reread->GetFile()->IsReadable() )
{
Program: gdcm
Module: $RCSfile: VTKTestRead.cxx,v $
Language: C++
- Date: $Date: 2005/02/02 10:05:26 $
- Version: $Revision: 1.9 $
+ Date: $Date: 2005/02/09 15:06:48 $
+ Version: $Revision: 1.10 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
t->AddArgument("-T");
t->AddArgument( "." );
- // Instead of directly reading the dicom let's write it down to another file
- // do a scope to be sure everything gets cleanup
- {
- gdcm::FileHelper file( filename );
- file.GetImageData();
- file.SetWriteModeToRaw();
- file.WriteDcmExplVR( "TestWrite.dcm" );
- }
-
- // Ok for now still use the original image,
vtkGdcmReader *reader = vtkGdcmReader::New();
- //reader->SetFileName( filename.c_str() );
- reader->SetFileName( "TestWrite.dcm" );
+ reader->SetFileName( filename.c_str() );
reader->Update();
double range[2];