Program: gdcm
Module: $RCSfile: SplitIntoDirectories.cxx,v $
Language: C++
- Date: $Date: 2011/04/22 13:50:09 $
- Version: $Revision: 1.9 $
+ Date: $Date: 2011/04/22 14:39:41 $
+ Version: $Revision: 1.10 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
///this is a trick to build up a lexicographical compliant name :
/// eg : fich001.ima vs fich100.ima as opposed to fich1.ima vs fich100.ima
std::string name = GDCM_NAME_SPACE::Util::GetName( *it );
- if (verbose)
- std::cout << "name :[" << name << "]\n";
+
+ // if (verbose)
+ // std::cout << "name :[" << name << "]\n";
if (hasSkel)
{
Program: gdcm
Module: $RCSfile: SplitIntoXCoherentDirectories.cxx,v $
Language: C++
- Date: $Date: 2011/04/20 14:06:50 $
- Version: $Revision: 1.6 $
+ Date: $Date: 2011/04/22 14:39:41 $
+ Version: $Revision: 1.7 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
{
START_USAGE(usage)
- "\n exXCoherentFileSet :\n ",
+ "\n SplitIntoXCoherentDirectories :\n ",
"Shows the various 'XCoherent' Filesets within a directory ",
"Optionaly copies the images in a Directories tree ",
"usage: exXCoherentFileSet {dirin=inputDirectoryName} ",
GDCM_NAME_SPACE::SerieHelper *s;
s = GDCM_NAME_SPACE::SerieHelper::New();
+ GDCM_NAME_SPACE::File *f;
s->SetLoadMode(GDCM_NAME_SPACE::LD_ALL); // Load everything for each File
s->SetDirectory(dirName, true); // true : recursive exploration
GDCM_NAME_SPACE::DirListType fileNames = dirlist.GetFilenames();
GDCM_NAME_SPACE::FileList *l = new GDCM_NAME_SPACE::FileList;
- GDCM_NAME_SPACE::File *f;
+ std::string replaceChar("_");
// Loop on all the gdcm-readable files
for (GDCM_NAME_SPACE::DirListType::iterator it = fileNames.begin();
it != fileNames.end();
fileName = (*it2)->GetFileName();
// --- for write
lastFilename = GDCM_NAME_SPACE::Util::GetName( fileName );
+
+ // If you want to create file names of your own, here is the place!
+ // Just replace 'lastFilename' by anything that's better for you.
+ GDCM_NAME_SPACE:: Util::ReplaceSpecChar(lastFilename, replaceChar);
+
filenameout = xCoherentWriteDir + GDCM_NAME_SPACE::GDCM_FILESEPARATOR+ lastFilename;
if (write)
{
}
else if (copy)
{
- systemCommand = "cp \"" + fileName + "\" " + filenameout + "\"";
+ systemCommand = "cp \"" + fileName + "\" \"" + filenameout + "\"";
system( systemCommand.c_str());
}
if (verbose)
Program: gdcm
Module: $RCSfile: SplitIntoXCoherentDirectoriesIgnoreSerieUID.cxx,v $
Language: C++
- Date: $Date: 2011/04/20 14:06:50 $
- Version: $Revision: 1.4 $
+ Date: $Date: 2011/04/22 14:39:41 $
+ Version: $Revision: 1.5 $
Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
l'Image). All rights reserved. See Doc/License.txt or
START_USAGE(usage)
"\n SplitIntoCoherentFileSetIgnoreSerieUID :\n ",
"Shows the various 'XCoherent' Filesets within a directory ",
- "Optionaly copis the images in a Directories tree ",
+ "Optionaly copies the images in a Directories tree ",
"usage: SplitIntoCoherentFileSetIgnoreSerieUID{dirin=inputDirectoryName} ",
" dirout=outputDirectoryName ",
" { tag=group-elem | pos | ori } [sort] ",
" [{ write | copy }] ",
" [ { [noshadowseq] | [noshadow][noseq] } ] [debug] ",
- " [studyUID = ] ",
+ " [studyUID = ] ",
" dirin : user wants to analyze *all* the files ",
" within the directory ",
" write : user wants to create directories ",
GDCM_NAME_SPACE::SerieHelper *s;
s = GDCM_NAME_SPACE::SerieHelper::New();
-
+
GDCM_NAME_SPACE::File *f;
GDCM_NAME_SPACE::DirList dirlist(dirName, true); // recursive exploration
GDCM_NAME_SPACE::DirListType fileNames = dirlist.GetFilenames();
-
GDCM_NAME_SPACE::FileList *l = new GDCM_NAME_SPACE::FileList;
+
+ std::string replaceChar("_");
// Loop on all the gdcm-readable files
for (GDCM_NAME_SPACE::DirListType::iterator it = fileNames.begin();
it != fileNames.end();
l->push_back(f);
}
-
/* ===========================================================================================*/
std::string systemCommand;
std::string filenameout;
{
xCoherentName = (*i).first;
if (verbose)
- std::cout << "xCoherentName = " << xCoherentName << std::endl;
+ std::cout << "==========================================xCoherentName = " << xCoherentName << std::endl;
GDCM_NAME_SPACE::Util::ReplaceSpecChar(xCoherentName, rep);
// --- for write
if (write)
controlCount ++;
fileName = (*it2)->GetFileName();
std::cout << " " << fileName << std::endl;
-
- // --- for write
+
+ lastFilename = GDCM_NAME_SPACE::Util::GetName( fileName );
+
+ // If you want to create file names of your own, here is the place!
+ // Just replace 'lastFilename' by anything that's better for you.
+ GDCM_NAME_SPACE:: Util::ReplaceSpecChar(lastFilename, replaceChar);
+
+ filenameout = xCoherentWriteDir + GDCM_NAME_SPACE::GDCM_FILESEPARATOR+ lastFilename;
+ //systemCommand = "cp \"" + fileName + " \"" + filenameout;
+ //system( systemCommand.c_str());
+ // --- for write
if (write)
{
fh = GDCM_NAME_SPACE::FileHelper::New( (*it2) );
uint8_t *imageData = fh->GetImageDataRaw();// somewhat important : Loads the Pixels in memory !
if (!imageData)
std::cout << "fail to read [" << (*it2)->GetFileName() << std::endl;
- lastFilename = GDCM_NAME_SPACE::Util::GetName( fileName );
- filenameout = xCoherentWriteDir + GDCM_NAME_SPACE::GDCM_FILESEPARATOR+ lastFilename;
- //systemCommand = "cp \"" + fileName + " \"" + filenameout;
- //system( systemCommand.c_str());
-
fh->SetWriteTypeToDcmExplVR();
fh->SetContentType(GDCM_NAME_SPACE::UNMODIFIED_PIXELS_IMAGE);
if (!fh->Write(filenameout))
if (verbose)
std::cout << "3 " << systemCommand << std::endl;
fh->Delete();
- }
+ }
// --- end for write
- }
+ }
std::cout << std::endl;
}
}
projects / gdcm.git / commitdiff