Add a gdcm1.3 syntax version of WriteDicomAsJPEG2000.cxx

diff --git a/Example/WriteDicomAsJPEG2000.cxx b/Example/WriteDicomAsJPEG2000.cxx
new file mode 100644 (file)
index 0000000..ab27c47
--- /dev/null
+++ b/Example/WriteDicomAsJPEG2000.cxx
@@ -0,0 +1,151 @@
+/*=========================================================================
+                                                                                
+  Program:   gdcm
+  Module:    $RCSfile: WriteDicomAsJPEG2000.cxx,v $
+  Language:  C++
+  Date:      $Date: 2006/07/12 09:35:38 $
+  Version:   $Revision: 1.2 $
+                                                                                
+  Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de
+  l'Image). All rights reserved. See Doc/License.txt or
+  http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details.
+                                                                                
+     This software is distributed WITHOUT ANY WARRANTY; without even
+     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+     PURPOSE.  See the above copyright notices for more information.
+                                                                                
+=========================================================================*/
+
+#include "gdcmFile.h"
+#include "gdcmFileHelper.h"
+#include "gdcmUtil.h"
+
+// Open a dicom file and compress it as JPEG 2000 stream
+int main(int argc, char *argv[])
+{
+  if( argc < 2)
+    {
+    std::cerr << argv[0] << " inputfilename.dcm\n";
+    return 1;
+    }
+
+   std::string filename = argv[1];
+   std::string outfilename = "/tmp/bla.dcm";
+   if( argc >= 3 )
+     outfilename = argv[2];
+   int quality = 100;
+   if( argc >= 4 )
+     quality = atoi(argv[3]);
+   std::cerr << "Using quality: " << quality << std::endl;
+
+// Step 1 : Create the header of the image
+   //gdcm::File *f = new gdcm::File();
+   // gdcm1.3 syntax. Sorry
+   gdcm::File *f = gdcm::File::New();
+   f->SetLoadMode ( gdcm::LD_ALL ); // Load everything
+   f->SetFileName( filename );
+   f->Load();
+
+   //gdcm::FileHelper *tested = new gdcm::FileHelper( f );
+   // gdcm1.3 syntax. Sorry   
+   gdcm::FileHelper *tested = gdcm::FileHelper::New( f );
+   std::string PixelType = tested->GetFile()->GetPixelType();
+   int xsize = f->GetXSize();
+   int ysize = f->GetYSize();
+   int zsize = f->GetZSize();
+   //tested->Print( std::cout );
+
+   int samplesPerPixel = f->GetSamplesPerPixel();
+   size_t testedDataSize    = tested->GetImageDataSize();
+   uint8_t *testedImageData = tested->GetImageData();
+
+// Step 1 : Create the header of the image
+
+//   gdcm::File *fileToBuild = new gdcm::File();
+   // gdcm1.3 syntax. Sorry !
+   gdcm::File *fileToBuild = gdcm::File::New();
+   
+   std::ostringstream str;
+
+   // Set the image size
+   str.str("");
+   str << xsize;
+   //fileToBuild->InsertValEntry(str.str(),0x0028,0x0011); // Columns
+   // gdcm1.3 syntax. Sorry !
+   fileToBuild->InsertEntryString(str.str(),0x0028,0x0011, "UI"); // Columns
+   str.str("");
+   str << ysize;
+   //fileToBuild->InsertValEntry(str.str(),0x0028,0x0010); // Rows
+   // gdcm1.3 syntax. Sorry !
+   fileToBuild->InsertEntryString(str.str(),0x0028,0x0010, "UI"); // Rows
+
+   if(zsize>1)
+   {
+      str.str("");
+      str << zsize;
+      //fileToBuild->InsertValEntry(str.str(),0x0028,0x0008); // Number of Frames
+   // gdcm1.3 syntax. Sorry !
+      fileToBuild->InsertEntryString(str.str(),0x0028,0x0008, "UI"); // Number of Frames
+   }
+   int bitsallocated = f->GetBitsAllocated();
+   int bitsstored = f->GetBitsStored();
+   int highbit = f->GetHighBitPosition();
+   //std::string pixtype = f->GetPixelType();
+   int sign = f->IsSignedPixelData();
+
+   // Set the pixel type
+   str.str("");
+   str << bitsallocated;
+   //fileToBuild->InsertValEntry(str.str(),0x0028,0x0100); // Bits Allocated
+   // gdcm1.3 syntax. Sorry !
+   fileToBuild->InsertEntryString(str.str(),0x0028,0x0100,"US"); // Bits Allocated
+   
+   str.str("");
+   str << bitsstored;  
+   //fileToBuild->InsertValEntry(str.str(),0x0028,0x0101); // Bits Stored   
+   // gdcm1.3 syntax. Sorry !
+   fileToBuild->InsertEntryString(str.str(),0x0028,0x0101, "UI"); // Bits Stored
+   str.str("");
+   str << highbit;
+   //fileToBuild->InsertValEntry(str.str(),0x0028,0x0102); // High Bit
+   // gdcm1.3 syntax. Sorry !
+   fileToBuild->InsertEntryString(str.str(),0x0028,0x0102, "UI"); // High Bit
+
+   // Set the pixel representation
+   str.str("");
+   str << sign;
+   //fileToBuild->InsertValEntry(str.str(),0x0028,0x0103); // Pixel Representation
+   // gdcm1.3 syntax. Sorry !
+   fileToBuild->InsertEntryString(str.str(),0x0028,0x0103, "UI"); // Pixel Representation
+
+
+   // Set the samples per pixel
+   str.str("");
+   str << samplesPerPixel; //img.components;
+   //fileToBuild->InsertValEntry(str.str(),0x0028,0x0002); // Samples per Pixel
+   // gdcm1.3 syntax. Sorry !
+   fileToBuild->InsertEntryString(str.str(),0x0028,0x0002, "UI"); // Samples per Pixel
+
+// Step 2 : Create the output image
+   //gdcm::FileHelper *fileH = new gdcm::FileHelper(fileToBuild);
+   // gdcm1.3 syntax. Sorry !
+   gdcm::FileHelper *fileH = gdcm::FileHelper::New(fileToBuild);
+   fileH->SetWriteTypeToJPEG2000(  );
+   fileH->SetImageData(testedImageData, testedDataSize);
+   if( !fileH->Write(outfilename) )
+     {
+     std::cerr << "write fails" << std::endl;
+     }
+
+   //delete f;
+   // gdcm1.3 syntax. Sorry !   
+   f->Delete();
+   //delete tested;
+   tested->Delete();
+   //delete fileToBuild;
+   fileToBuild->Delete();
+   //delete fileH;
+   fileH->Delete();
+
+   return 0;
+}