exit 1
fi
-#nb_phase_file=`find $1 -iname "*[0-99].[0-9].mhd" -o -iname "*[0-99]*\]*.mhd" | wc -l`
nb_phase_file=`find $1 -iname "*[0-9].mhd" -o -iname "*[0-9]*\]*.mhd" | wc -l`
if [ $nb_phase_file = 0 ]
then
########## CT #########
list_pattern=""
-#list_phase_file=`find $1 -iname "*[0-99].[0-9].mhd"`
list_phase_file=`find $1 -iname "*[0-9].mhd"`
for phase_file in $list_phase_file
do
pattern=""
fi
- #nbph0=`find $1 -iname "${pattern}[0-9].[0-9].mhd" | wc -l`
- #orig0=`find $1 -iname "${pattern}[0-9].[0-9].mhd" | sort | head -n 1`
- #listph0=`find $1 -iname "${pattern}[0-9].[0-9].raw" | sort`
-
- #nbph1=`find $1 -iname "${pattern}[0-9][0-9].[0-9].mhd" | wc -l`
- #orig1=`find $1 -iname "${pattern}[0-9][0-9].[0-9].mhd" | sort | head -n 1`
- #listph1=`find $1 -iname "${pattern}[0-9][0-9].[0-9].raw" | sort`
-
- #nbph=$(( nbph0+nbph1 ))
- #orig=`echo -e "$orig0\n$orig1" | head -n 1`
- #listph="$listph0 $listph1"
-
nbph=`find $1 -iname "${pattern}*[0-9].mhd" | wc -l`
orig=`find $1 -iname "${pattern}*[0-9].mhd" | sort | head -n 1`
listph=`find $1 -iname "${pattern}*[0-9].raw" | sort`
############ PET ###########
list_pattern=""
-#list_phase_file=`find $1 -iname "*[0-99]*\]*.mhd"`
list_phase_file=`find $1 -iname "*[0-9]*\]*.mhd"`
for phase_file in $list_phase_file
do
phase_file_name=`basename $phase_file`
- #if [[ ! -z `echo "$phase_file_name" | grep "[0-99]-.*\]"` ]]
if [[ ! -z `echo "$phase_file_name" | grep "[0-9]-.*\]"` ]]
then
- #prefix=`echo $phase_file_name | sed "s/.*[0-99]-/-/;s/\]_.*//"`
prefix=`echo $phase_file_name | sed "s/.*[0-9]-/-/;s/\]_.*//"`
else
prefix="NONE"
pattern=""
fi
- #nbph=`find $1 -iname "*[0-99]${pattern}\]*.mhd" | wc -l`
- #orig=`find $1 -iname "*[0-99]${pattern}\]*.mhd" | sort | head -n 1`
- #listph=`find $1 -iname "*[0-99]${pattern}\]*.raw" | sort`
-
nbph=`find $1 -iname "*[0-9]${pattern}\]*.mhd" | wc -l`
orig=`find $1 -iname "*[0-9]${pattern}\]*.mhd" | sort | head -n 1`
listph=`find $1 -iname "*[0-9]${pattern}\]*.raw" | sort`
- #file_name_4D=`basename "$orig" | sed "s/[0-99]${pattern}\]/${pattern}\]/;s/_.mhd/_4D.mhd/"`
file_name_4D=`basename "$orig" | sed "s/[0-9]${pattern}\]/${pattern}\]/;s/_.mhd/_4D.mhd/"`
write_mhd_4D $1