echo " ${indent}merged ${count} files"
}
-rundir="${1?"provide run dir"}"
-nboutputdirs="$(find "${rundir}" -mindepth 1 -type d -name 'output*' | wc -l)"
-
-test ${nboutputdirs} -gt 0 || error "no output dir found"
-echo "found ${nboutputdirs} partial output dirs"
-
-outputdir="results"
-if [ "${rundir}" != "." -a "${rundir##*.}" != "${rundir}" ]
-then
- outputdir="results.${rundir##*.}"
-fi
-outputdir="$(basename "${outputdir}")"
-echo "output dir is ${outputdir}"
-test -d "${outputdir}" && rm -r "${outputdir}"
-mkdir "${outputdir}"
-
-for outputfile in $(find "${rundir}" -regextype 'posix-extended' -type f -regex '.*\.(hdr|root|txt)' | awk -F '/' '{ print $NF }' | sort | uniq)
-do
- indent=" ** "
+function merge_dispatcher {
+ local indent=" ** "
+ local outputfile="${1:?"provide output filename"}"
echo "merging ${outputfile}"
- partialoutputfiles="$(find "${rundir}" -type f -name "${outputfile}")"
- nboutputfiles="$(echo "${partialoutputfiles}" | wc -l)"
+ local partialoutputfiles="$(find "${rundir}" -type f -name "${outputfile}")"
+ local nboutputfiles="$(echo "${partialoutputfiles}" | wc -l)"
if test ${nboutputdirs} -ne ${nboutputfiles}
then
warning "missing files"
- continue
+ return
fi
- firstpartialoutputfile="$(echo "${partialoutputfiles}" | head -n 1)"
- firstpartialoutputextension="${firstpartialoutputfile##*.}"
+ local firstpartialoutputfile="$(echo "${partialoutputfiles}" | head -n 1)"
+ local firstpartialoutputextension="${firstpartialoutputfile##*.}"
echo "${indent}testing file type on ${firstpartialoutputfile}"
if test "${firstpartialoutputextension}" == "hdr"
then
echo "${indent}this is a analyse image"
- mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
+ local mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
merge_hdr_image "${mergedfile}" ${partialoutputfiles} || error "error while merging"
- continue
+ return
fi
if test "${firstpartialoutputextension}" == "root"
then
echo "${indent}this is a root file"
- mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
+ local mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
merge_root "${mergedfile}" ${partialoutputfiles} || error "error while merging"
- continue
+ return
fi
if test "${firstpartialoutputextension}" == "txt" && grep 'NumberOfEvent' "${firstpartialoutputfile}" > /dev/null
then
echo "${indent}this is a stat file"
- mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
+ local mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
merge_stat "${mergedfile}" ${partialoutputfiles} || error "error while merging"
- continue
+ return
fi
if test "${firstpartialoutputextension}" == "txt" && grep 'Resol' "${firstpartialoutputfile}" > /dev/null
then
- resol="$(sed -nr '/Resol/s/^.*=\s+\((.+)\)\s*$/\1/p' "${firstpartialoutputfile}")"
- resolx="$(echo "${resol}" | cut -d',' -f1)"
- resoly="$(echo "${resol}" | cut -d',' -f2)"
- resolz="$(echo "${resol}" | cut -d',' -f3)"
+ local resol="$(sed -nr '/Resol/s/^.*=\s+\((.+)\)\s*$/\1/p' "${firstpartialoutputfile}")"
+ local resolx="$(echo "${resol}" | cut -d',' -f1)"
+ local resoly="$(echo "${resol}" | cut -d',' -f2)"
+ local resolz="$(echo "${resol}" | cut -d',' -f3)"
if test "${resol}" == "1,1,1"
then
echo "${indent}this is a txt integral value"
- mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
+ local mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
merge_txt_image "${mergedfile}" ${partialoutputfiles} || error "error while merging"
- continue
+ return
fi
if test \( "${resolx}" == "1" -a "${resoly}" == "1" \) -o \( "${resoly}" == "1" -a "${resolz}" == "1" \) -o \( "${resolz}" == "1" -a "${resolx}" == "1" \)
then
echo "${indent}this is a txt profile"
- mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
+ local mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}")"
merge_txt_image "${mergedfile}" ${partialoutputfiles} || error "error while merging"
- continue
+ return
fi
fi
-
warning "unknown file type"
+}
+
+rundir="${1?"provide run dir"}"
+nboutputdirs="$(find "${rundir}" -mindepth 1 -type d -name 'output*' | wc -l)"
+
+test ${nboutputdirs} -gt 0 || error "no output dir found"
+echo "found ${nboutputdirs} partial output dirs"
+
+outputdir="results"
+if [ "${rundir}" != "." -a "${rundir##*.}" != "${rundir}" ]
+then
+ outputdir="results.${rundir##*.}"
+fi
+outputdir="$(basename "${outputdir}")"
+echo "output dir is ${outputdir}"
+test -d "${outputdir}" && rm -r "${outputdir}"
+mkdir "${outputdir}"
+
+for outputfile in $(find "${rundir}" -regextype 'posix-extended' -type f -regex '.*\.(hdr|root|txt)' | awk -F '/' '{ print $NF }' | sort | uniq)
+do
+ merge_dispatcher "${outputfile}"
done