@echo off
-
set baseProject=C:\Eduardo\Creatis
set ProgramFiles=C:\Program Files (x86)
::set baseProject=E:\creatis\c_mingw
::set ProgramFiles=C:\Program Files (x86)
-
-
-
set docGeneration=OFF
set cmakeBin=%baseProject%\DevelopperTools\cmake-3.11.2-win64-x64\bin\cmake.exe
set creatoolsGeneration=%baseProject%\C10\ct
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%creasource% >> tmp.sh
echo cd %creasource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%bbtksource% >> tmp.sh
echo cd %bbtksource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%creamaracassource% >> tmp.sh
echo cd %creamaracassource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%creavtksource% >> tmp.sh
echo cd %creavtksource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%creaenvironmentsource% >> tmp.sh
echo cd %creaenvironmentsource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%creabrukersource% >> tmp.sh
echo cd %creabrukersource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%creaimagesource% >> tmp.sh
echo cd %creaimagesource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%creacontourssource% >> tmp.sh
echo cd %creacontourssource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%crearigidregistrationssource% >> tmp.sh
echo cd %crearigidregistrationssource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%bbtkgeditorsource% >> tmp.sh
echo cd %bbtkgeditorsource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%creaminitoolssource% >> tmp.sh
echo cd %creaminitoolssource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
echo git clone ssh://gitolite@git.creatis.insa-lyon.fr/%creatoolssource% >> tmp.sh
echo cd %creatoolssource% >> tmp.sh
-echo git checkout vtk7itk4wx3-mingw64 >> tmp.sh
+echo git checkout vtk8itk4wx3-mingw64 >> tmp.sh
echo cd .. >> tmp.sh
%cmakeBin% -D --BUILD_ALL:BOOL=ON -D crea_DIR:PATH=%1\c_%buildtype%%platforme%\ci CMakeCache.txt
%cmakeBin% -D BUILD_BBTK_DOC:BOOL=%3 -D BUILD_BBTK_DOC_GUIDES_HTML:BOOL=%3 -D BUILD_BBTK_DOC_GUIDES_PDF:BOOL=%3 -D BUILD_BBTK_DOC_DOXYGEN:BOOL=%3 -D BUILD_BBTK_DOC_PACKAGE:BOOL=%3 CMakeCache.txt
-%cmakeBin% -D CMAKE_CXX_FLAGS:STRING="-fpermissive" CMakeCache.txt
+%cmakeBin% -D CMAKE_CXX_FLAGS:STRING="-fpermissive -std=c++11" CMakeCache.txt
%cmakeBin% CMakeCache.txt
exit /B
%cmakeBin% -D crea_DIR:PATH=%1\c_%buildtype%%platforme%\ci -D creaEnvironment_DIR:PATH=%1\c_%buildtype%%platforme%\ci -D creaMaracasVisu_DIR:PATH=%1\c_%buildtype%%platforme%\ci -D creaImageIO_DIR:PATH=%1\c_%buildtype%%platforme%\ci CMakeCache.txt
%cmakeBin% -D BBTK_DIR:PATH=%1\c_%buildtype%%platforme%\ci CMakeCache.txt
+%cmakeBin% -D BUILD_BBTK_PACKAGE_creaContours:BOOL=ON CMakeCache.txt
%cmakeBin% -D creaContours_DOC:BOOL=%2 -D BUILD_BBTK_PACKAGE_creaContours_DOXYGEN_DOC:BOOL=%2 CMakeCache.txt
%cmakeBin% CMakeCache.txt
::%cmakeBin% -D BUILD_BBTK_PACKAGE_creaMaracasVisu_DOXYGEN_DOC:BOOL=%3 CMakeCache.txt
::%cmakeBin% CMakeCache.txt
-%cmakeBin% -D CMAKE_CXX_FLAGS:STRING=/openmp
+%cmakeBin% -D CMAKE_CXX_FLAGS:STRING=-openmp
%cmakeBin% -D crea_DIR:PATH=%1\c_%buildtype%%platforme%\ci CMakeCache.txt
%cmakeBin% -D BBTK_DIR:PATH=%1\c_%buildtype%%platforme%\ci CMakeCache.txt
%cmakeBin% -D BUILD_BBTK_PACKAGE_creaMaracasVisu:BOOL=ON -D creaMaracasVisu_DOC:BOOL=%3 CMakeCache.txt
::%cmakeBin% -D BUILD_BBTK_PACKAGE_creaVtk_DOXYGEN_DOC:BOOL=%3 CMakeCache.txt
::%cmakeBin% CMakeCache.txt
+%cmakeBin% -D CMAKE_CXX_FLAGS:STRING=-openmp
%cmakeBin% -D crea_DIR:PATH=%1\c_%buildtype%%platforme%\ci CMakeCache.txt
%cmakeBin% -D BBTK_DIR:PATH=%1\c_%buildtype%%platforme%\ci CMakeCache.txt
%cmakeBin% -D BUILD_BBTK_PACKAGE_creaVtk:BOOL=ON -D creaVtk_DOC:BOOL=%3 CMakeCache.txt
-exit /B
\ No newline at end of file
+exit /B
cd C:/Eduardo/Creatis/C10/ct/cs
git clone ssh://gitolite@git.creatis.insa-lyon.fr/crea
cd crea
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/bbtk
cd bbtk
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/creaMaracasVisu
cd creaMaracasVisu
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/creaVtk
cd creaVtk
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/creaEnvironment
cd creaEnvironment
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/creaBruker
cd creaBruker
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/creaImageIO
cd creaImageIO
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/creaContours
cd creaContours
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/creaRigidRegistration
cd creaRigidRegistration
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/bbtkGEditor
cd bbtkGEditor
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/creaMiniTools
cd creaMiniTools
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
git clone ssh://gitolite@git.creatis.insa-lyon.fr/creaTools
cd creaTools
-git checkout vtk7itk4wx3-mingw64
+git checkout vtk8itk4wx3-mingw64
cd ..
set thirdpartyGenerationBase=C:\Eduardo\Creatis\C10\tpl\
-
set cmakeBin=C:\Eduardo\Creatis\DevelopperTools\cmake-3.11.2-win64-x64\bin\cmake.exe
-
set wgetPath="C:\Eduardo\Creatis\DevelopperTools\wget-1.19.4-win32\wget.exe"
-
set zipPath="C:\Program Files\7-Zip\7z.exe"
::set zipPath="peazip -ext2here "
-
set DirMingwDlls=C:\Eduardo\Creatis\DevelopperTools\mingw-w64\x86_64-7.3.0-posix-seh-rt_v5-rev0\mingw64\bin
-
set PATH=C:\Windows\system32;C:\Eduardo\Creatis\DevelopperTools\mingw-w64\x86_64-7.3.0-posix-seh-rt_v5-rev0\mingw64\bin;
-
start /wait install_generate_thirdparty-x64Release.bat
::REM start /wait install_generate_thirdparty-x64Debug.bat
::REM start /wait install_generate_thirdparty-x86Release.bat
:: REM start /wait install_generate_thirdparty-x86Debug.bat
-::pause
\ No newline at end of file
+::pause
::set GDCMFNAME=gdcm_05_Mai_2011.tar
::set GDCMFNAME=gdcm_11_Oct_2011.tar
::set GDCMFNAME=gdcm_10_Mars_2017-vtk7.tar
-set GDCMFNAME=gdcm13_2018_05_28_vtk8.zip
+set GDCMFNAME=gdcm13_2019_06_17_vtk8.zip
set TTHFNAME=tth_exe.zip
set SQLITEFNAME=sqlite_v3.6.23.1.zip
set JOMFNAME=jom.zip
#!/bin/bash -e
-scriptDirName=$(dirname $(readlink -f $0) )
+#EED 2018-08-26
+
+#scriptDirName=$(dirname $(readlink -f $0) )
+scriptDirName=$(pwd)
#########################################################################
############ Local Functions #######################################
# default configuration parameters
OperatingSystem=`getDistrib`
corenumber=`getncore`
+echo "hola1"
generationdir=$HOME/Creatis/creaTools
installPrefixThird=
installPrefix=
docgeneration=OFF
sourcesFrom=GIT
+
loginUserName=$USER
loginGroupName=`groups | awk '{print $1}'`
buildType=Release
gdcmVersion=GDCM1
-ITKVersion=ITK3
+ITKVersion=ITK4
export ETC_BASHRC=`getbashrc`
checkDistrib $OperatingSystem
# complete default install prefix
-if [ -z "$installPrefix" ] ; then installPrefix=$generationdir/creatools_install; fi
-if [ -z "$installPrefixThird" ] ; then installPrefixThird=$generationdir/thirdparty_install; fi
+if [ -z "$installPrefix" ] ; then installPrefix=$generationdir/ci; fi
+if [ -z "$installPrefixThird" ] ; then installPrefixThird=$generationdir/tpli; fi
# check build type
if [ `checkVal $buildType Release Debug RelWithDebug` == "false" ] ; then
# vtk
if [ `checkVal $command all 3rd 3rd-vtk` == true ] ; then
- bigDisplay "INSTALL VTK"
- source scripts/ThirdParty-install-VTK.sh
- cd $scriptDirName
+ bigDisplay "INSTALL VTK"
+ source scripts/ThirdParty-install-VTK.sh
+ cd $scriptDirName
fi
# gdcm
# itk
if [ `checkVal $command all 3rd 3rd-itk` == true ] ; then
- bigDisplay "INSTALL $ITKVersion"
- bash scripts/ThirdParty-install-ITK.sh
+ bigDisplay "INSTALL $ITKVersion"
+ bash scripts/ThirdParty-install-ITK.sh
cd $scriptDirName
fi
cd $scriptsDir
scp $scriptDir/Install-Creatools-Bin.sh $distanceAdress/Install-Creatools-Bin-Release-$creatoolsMajorVersion.$creatoolsMinorVersion.$creatoolsBuildVersion.sh
- ssh davila@tux.creatis.insa-lyon.fr "cd creatools/creaTools;rm Install-Creatools-Bin-Release.sh; ln -s v2.6.x/Install-Creatools-Bin-Release-$creatoolsMajorVersion.$creatoolsMinorVersion.$creatoolsBuildVersion.sh Install-Creatools-Bin-Release.sh"
+ ssh davila@tux.creatis.insa-lyon.fr "cd creatools/creaTools;rm Install-Creatools-Bin-Release.sh; ln -s v3.0.x/Install-Creatools-Bin-Release-$creatoolsMajorVersion.$creatoolsMinorVersion.$creatoolsBuildVersion.sh Install-Creatools-Bin-Release.sh"
- ssh davila@tux.creatis.insa-lyon.fr "cd creatools/creaTools;rm creatools-Linux-Bin.sh; ln -s v2.6.x/$filename_BinVersion creatools-Linux-Bin.sh"
+ ssh davila@tux.creatis.insa-lyon.fr "cd creatools/creaTools;rm creatools-Linux-Bin.sh; ln -s v3.0.x/$filename_BinVersion creatools-Linux-Bin.sh"
echo ""
#if [ true = false ]
if [ true = true ]
then
+
bash $scriptDir/cmakemod.sh $creasource $generationdir $installPrefix $buildType
bash $scriptDir/creaVariables.sh $creasource $generationdir $docgeneration
bash $scriptDir/compilemod.sh $buildType $creasource $generationdir $corenumber
echo ========================================================= $bbtksource $generationdir $installPrefix $buildType
bash $scriptDir/cmakemod.sh $bbtksource $generationdir $installPrefix $buildType
bash $scriptDir/bbtkVariables.sh $bbtksource $generationdir $docgeneration $gdcmVersion
- bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber
- bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbtk
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbi
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbfy
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbStudio
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbPackageBrowser
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbs2cpp
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbRegenerateBoxesLists
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbRegeneratePackageDoc
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbPlugPackage
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbpConfigurator
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbvtk
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber bbwx
+ bash $scriptDir/compilemod.sh $buildType $bbtksource $generationdir $corenumber
bash $scriptDir/ctestmod.sh $bbtksource $generationdir
fi
fi
# modify /etc/bashrc (we cannot modify .bashrc, since we switched as root)
# - add line 'bash $installPrefix/creatools_install/share/creatools_base_library_config.sh'
- bash installmod.sh $buildType $creasource $generationdir $installPrefix
- bash installmod.sh $buildType $bbtksource $generationdir $installPrefix
- bash installmod.sh $buildType $creavtksource $generationdir $installPrefix
- bash installmod.sh $buildType $creamaracassource $generationdir $installPrefix
- bash installmod.sh $buildType $creaenvironmentsource $generationdir $installPrefix
- bash installmod.sh $buildType $creabrukersource $generationdir $installPrefix
- bash installmod.sh $buildType $creaimagesource $generationdir $installPrefix
- bash installmod.sh $buildType $creacontourssource $generationdir $installPrefix
- bash installmod.sh $buildType $crearigidregistrationssource $generationdir $installPrefix
- bash installmod.sh $buildType $bbtkgeditorsource $generationdir $installPrefix
- bash installmod.sh $buildType $creatoolssource $generationdir $installPrefix
- bash installmod.sh $buildType $creaminitoolssource $generationdir $installPrefix
+ bash installmod.sh $buildType $creasource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $bbtksource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $creavtksource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $creamaracassource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $creaenvironmentsource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $creabrukersource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $creaimagesource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $creacontourssource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $crearigidregistrationssource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $bbtkgeditorsource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $creatoolssource $generationdir $installPrefix $corenumber
+ bash installmod.sh $buildType $creaminitoolssource $generationdir $installPrefix $corenumber
# bash installmod.sh $buildType $libidosource $generationdir $installPrefix
#export as well bbPackages_DIR // JPR 25 Mai 2011
#
if [ $sourcesFrom = GIT ] || [ $sourcesFrom = GIT-READ-ONLY ];
then
- ssh-add
+ ssh-add
bash $scriptDir/gitclone.sh $creasource $generationdir $sourcesFrom
bash $scriptDir/gitclone.sh $bbtksource $generationdir $sourcesFrom
bash $scriptDir/gitclone.sh $creavtksource $generationdir $sourcesFrom
bash $scriptDir/gitclone.sh $creaminitoolssource $generationdir $sourcesFrom
bash $scriptDir/gitclone.sh $creatoolstoolssource $generationdir $sourcesFrom
# bash $scriptDir/cvscheckout.sh $libidosource-ESRF $generationdir $cvsUserName
- # mv $libidosource-ESRF $libidosource
+ # mv $libidosource-ESRF $libidosource
+
+ cd $generationdir/creatools_source/$creasource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$bbtksource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$creavtksource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$creamaracassource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$creaimagesource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$creacontourssource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$crearigidregistrationssource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$bbtkgeditorsource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$creatoolssource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$creabrukersource
+ git checkout vtk8itk5wx3-mingw64
+ cd $generationdir/creatools_source/$creaminitoolssource
+ git checkout vtk8itk5wx3-mingw64
fi
if [ $sourcesFrom = HTML ]
###########################################
function getncore {
if [ `uname` == Darwin ] ; then # MacOS
- system_profiler | grep Processor | awk '$1=="Number" {print $4}'
+#EED 2018-08-26
+# system_profiler | grep Processor | awk '$1=="Number" {print $4}'
+ sysctl hw.physicalcpu hw.logicalcpu | grep logicalcpu | awk '{print $2}'
else
cat /proc/cpuinfo | grep processor | wc -l
fi
echo "Please enter the root passwd to add necessary packages:";
if [ "Ubuntu" == $OperatingSystem ] ; then
sudo bash ThirdParty-install-Base-rpm.sh $OperatingSystem
- else
+ elif [ "MacOS" == $OperatingSystem ] ; then
+ sudo bash ThirdParty-install-Base-rpm.sh $OperatingSystem
+ else
su -c "bash ThirdParty-install-Base-rpm.sh $OperatingSystem"
fi
fi
yum install graphviz -y
yum install texlive -y
yum install latex2html -y
- yum install wxGTK-devel wxBase -y
+ yum install wxGTK3-devel wxBase3 -y
yum install boost-devel -y
yum install sqlite-devel -y
yum install qt-devel -y
yum install mesa-libOSMesa-devel -y
yum install gcc -y
yum install gcc-c++ -y
+ yum install make -y
yum install redhat-rpm-config -y
yum install xerces-c-devel -y
yum install git -y
apt-get --yes install libosmesa6-dev #Mesa6
apt-get --yes install uuid-dev # uuid para la instalacion de itk
apt-get --yes install libxaw7-dev # X11
- ;;
+ ;;
MacOS)
port selfupdate
- port install cmake -y
- port install doxygen -y
- port install graphviz -y
- # port install tetex -y (replaced by texlive) # cf EED : http://www.creatis.insa-lyon.fr/site/fr/CreatoolsInstallInstructionsv2.0.1MacOsv10.5.6-Developpers
- port install texlive -y
- port install latex2html -y
- port install wxGTK -y
- port install boost -y
- ln -s libboost_signals-xgcc40-mt-1_38.dylib libboost_signals.dylib /opt/local/lib # cf EED : http://www.creatis.insa-lyon.fr/site
- ln -s libboost_signals-xgcc40-mt-1_38.dylib libboost_signals.dylib /opt/local/lib # cf EED
- ln -s libboost_filesystem-xgcc40-mt-1_38.dylib libboost_filesystem.dylib /opt/local/lib # cf EE
- ln -s libboost_system-xgcc40-mt-1_38.dylib libboost_system.dylib /opt/local/lib # cf EE
- port install sqlite3 -y
- port install qt4-mac -y
- ln -s qmake-mac qmake /opt/local/bin # cf EED
- port install mesa -y
- port install fcgi -y ## It's working ?
- port install fcgi-devel -y ## It's working ?
+ port -N install wget -y
+ port -N install cmake -y
+ port -N install doxygen -y
+ port -N install graphviz -y
+ # port -N install tetex -y (replaced by texlive) # cf EED : http://www.creatis.insa-lyon.fr/site/fr/CreatoolsInstallInstructionsv2.0.1MacOsv10.5.6-Developpers
+ port -N install texlive -y
+ port -N install latex2html -y
+ port -N install wxWidgets-3.0 -y
+ port -N install boost -y
+# ln -s libboost_signals-xgcc40-mt-1_38.dylib libboost_signals.dylib /opt/local/lib # cf EED : http://www.creatis.insa-lyon.fr/site
+# ln -s libboost_signals-xgcc40-mt-1_38.dylib libboost_signals.dylib /opt/local/lib # cf EED
+# ln -s libboost_filesystem-xgcc40-mt-1_38.dylib libboost_filesystem.dylib /opt/local/lib # cf EE
+# ln -s libboost_system-xgcc40-mt-1_38.dylib libboost_system.dylib /opt/local/lib # cf EE
+ port -N install sqlite3 -y
+# port install qt4-mac -y
+# ln -s qmake-mac qmake /opt/local/bin # cf EED
+# port install mesa -y
+ port -N install fcgi -y ## It's working ?
;;
*)
echo " '$OperatingSystem' : Unknown (for us...) Operating Sytem "
# /// \TODO move theese ones upper in the process! JPR
export GDCM_DIR=$installPrefixThird/lib/gdcm/
-export VTK_DIR=$installPrefixThird/lib/vtk-5.10/
-export ITK_DIR=$installPrefixThird/lib/InsightToolkit/
-export WT_DIR=$installPrefixThird/lib/wt-3.3.4/
+export VTK_DIR=$installPrefixThird/lib/cmake/vtk-8.1/
+export ITK_DIR=$installPrefixThird/lib
+export WT_DIR=$installPrefixThird/lib/wt-4.0.4-rc1/
baseLibraryThirdPartyDir=$installPrefixThird/share/creatools
touch $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
chmod 755 $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
-echo installPrefixThird='$1' >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
-echo export PATH='$'PATH:'$'installPrefixThird/bin >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
-echo export VTK_DIR='$'installPrefixThird/lib/vtk-5.10 >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
-echo export ITK_DIR='$'installPrefixThird/lib/InsightToolkit >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+echo export GDK_BACKEND=x11 >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+echo export MESA_GL_VERSION_OVERRIDE=3.2 >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+echo installPrefixThird='$1' >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+echo export PATH='$'PATH:'$'installPrefixThird/bin >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+echo export VTK_DIR='$'installPrefixThird/lib >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+echo export ITK_DIR='$'installPrefixThird/lib >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
echo export GDCM_DIR='$'installPrefixThird/lib/gdcm >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
-echo export WT_DIR='$'installPrefixThird/lib/wt-3.3.4 >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+echo export WT_DIR='$'installPrefixThird/lib/wt-4.0.4-rc1 >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
echo export TTH='$'installPrefixThird/bin/tth >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
if [ $OperatingSystem = "MacOS" ]
echo export DYLD_LIBRARY_PATH='$'DYLD_LIBRARY_PATH:'$'GDCM_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
echo export DYLD_LIBRARY_PATH='$'DYLD_LIBRARY_PATH:'$'ITK_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
echo export DYLD_LIBRARY_PATH='$'DYLD_LIBRARY_PATH:'$'VTK_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
- echo export DYLD_LIBRARY_PATH='$'DYLD_LIBRARY_PATH:'$'WT_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+ echo export DYLD_LIBRARY_PATH='$'DYLD_LIBRARY_PATH:'$'WT_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
else
- echo export LD_LIBRARY_PATH='$'LD_LIBRARY_PATH:'$'GDCM_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
- echo export LD_LIBRARY_PATH='$'LD_LIBRARY_PATH:'$'ITK_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
- echo export LD_LIBRARY_PATH='$'LD_LIBRARY_PATH:'$'VTK_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
- echo export LD_LIBRARY_PATH='$'LD_LIBRARY_PATH:'$'WT_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+ echo export LD_LIBRARY_PATH='$'LD_LIBRARY_PATH:'$'GDCM_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+ echo export LD_LIBRARY_PATH='$'LD_LIBRARY_PATH:'$'ITK_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+ echo export LD_LIBRARY_PATH='$'LD_LIBRARY_PATH:'$'VTK_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
+ echo export LD_LIBRARY_PATH='$'LD_LIBRARY_PATH:'$'WT_DIR >> $baseLibraryThirdPartyDir/creatools_third_party_library_config.sh
fi
cd $PWD/scripts
then
stdCompiler=c++98
else
- stdCompiler=c++03
+ stdCompiler=c++11
fi
fi
cd $sourcesDir
- echo "we download new stuff"
- if [ $ITKVersion = ITK3 ]
- then
- # deal with ITK3
- #EED itkfile=InsightToolkit-3.20.0.patchCreatis.tar.gz
- #EED libname=InsightToolkit-3.20.0
-
- #EED itkfile=InsightToolkit-3.20.1.tar.gz
- #EED libname=InsightToolkit-3.20.1
-
- itkfile=InsightToolkit-3.20.1-patchCreatis.tgz
- libname=InsightToolkit-3.20.1-patchCreatis
-
- else
- # deal with ITK4
- itkfile=ITK4.0.tgz
- libname=ITK
- fi
-
- if [ $OperatingSystem = "MacOS" ]
- then
- curl -O http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/$itkfile
- else
-##EED19mai2015 wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/$itkfile
- wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/$itkfile
- fi
- tar -xzvf $itkfile
+## if [ $ITKVersion = ITK3 ]
+## then
+## # deal with ITK3
+## #EED itkfile=InsightToolkit-3.20.0.patchCreatis.tar.gz
+## #EED libname=InsightToolkit-3.20.0
+##
+## #EED itkfile=InsightToolkit-3.20.1.tar.gz
+## #EED libname=InsightToolkit-3.20.1
+##
+## itkfile=InsightToolkit-3.20.1-patchCreatis.tgz
+## libname=InsightToolkit-3.20.1-patchCreatis
+##
+## else
+## # deal with ITK4
+## itkfile=InsightToolkit-4.13.1.zip
+## libname=InsightToolkit-4.13.1
+## fi
+
+ itkfile=InsightToolkit-5.0.1.zip
+ libname=InsightToolkit-5.0.1
+
+
+## if [ $OperatingSystem = "MacOS" ]
+## then
+## curl -O http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/$itkfile
+## else
+## ##EED19mai2015 wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/$itkfile
+## wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/$itkfile
+## ## tar -xzvf $itkfile
+## fi
+
+ wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/$itkfile
+ unzip $itkfile
#fi # JPR ------------1
cmake -G"Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
##cmake -G"CodeBlocks - Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
cmake -D CMAKE_BUILD_TYPE:STRING=$buildType -D CMAKE_INSTALL_PREFIX:PATH=$installPrefixThird CMakeCache.txt
- cmake -D BUILD_EXAMPLES:BOOL=OFF -D BUILD_TESTING:BOOL=OFF -D BUILD_SHARED_LIBS:BOOL=ON -D ITK_USE_REVIEW:BOOL=ON CMakeCache.txt
- if [ $ITKVersion = ITK4 ]
- then
- cmake -D ITKV3_COMPATIBILITY:BOOL=ON -D ITKGroup_Nonunit:BOOL=ON -D ITKGroup_IO:BOOL=ON -D Module_ITK-Deprecated:BOOL=ON -D Module_ITK-Review:BOOL=ON CMakeCache.txt
- fi
+
+ cmake -D BUILD_SHARED_LIBS:BOOL=ON -D BUILD_EXAMPLES:BOOL=OFF -D BUILD_TESTING:BOOL=OFF CMakeCache.txt
+## if [ $ITKVersion = ITK3 ]
+## then
+## cmake -D ITK_USE_REVIEW:BOOL=ON CMakeCache.txt
+## fi
+
+## if [ $ITKVersion = ITK4 ]
+## then
+
+## ##EED ITK4.0
+## # cmake -D ITKV3_COMPATIBILITY:BOOL=ON -D ITKGroup_Nonunit:BOOL=ON -D ITKGroup_IO:BOOL=ON -D Module_ITK-Deprecated:BOOL=ON -D Module_ITK-Review:BOOL=ON CMakeCache.txt
+##
+## ##EED ITK4.12
+## # -D ITK_USE_SYSTEM_GDCM=ON
+## cmake -D ITKV3_COMPATIBILITY:BOOL=ON -D Module_ITKReview:BOOL=ON CMakeCache.txt
+##
+## fi
+
+ cmake -D Module_ITKReview:BOOL=ON CMakeCache.txt
cmake -D CMAKE_CXX_FLAGS:STRING=-std=${stdCompiler} CMakeCache.txt
#uncomment following line if you want to use the bleeding edge of GDCM2!
echo "------"
+
+
#EED 2017-03-24
source $PWD/scripts/LocalFunctions.sh
if [ `getDistrib` == "CentOS" ] && [ `getKernelVersion` < "2.6.34" ]
then
stdCompiler=c++98
- else
- stdCompiler=c++03
+# else
+# stdCompiler=c++03
fi
-
scriptDir=$PWD
sourcesDir=$generationdir/thirdparty_sources
binDir=$generationdir/thirdparty_bin
cd $sourcesDir
echo "we download new stuff"
- if [ $OperatingSystem = "MacOS" ]
- then
-
-## EED 2013-10-29
-## curl -O http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/VTK-5.6.1.patchCreatis.tar.gz
-## # MacOS, clever enough to understand it *has* to uncompress, doesn't understand tar -z :-(
-## tar -xvf VTK-5.6.1.patchCreatis.tar.gz
-
- curl -O http://www.vtk.org/files/release/5.10/vtk-5.10.1.zip
- unzip vtk-5.10.1.zip
- cd VTK5.10.1/Rendering
- curl -O http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/vtk-5.10.1.vtkXOpenGLRenderWindow.patch
- patch < vtk-5.10.1.vtkXOpenGLRenderWindow.patch
- # MacOS, clever enough to understand it *has* to uncompress, doesn't understand tar -z :-(
- else
-
-## EED 2013-10-29
-## wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/VTK-5.6.1.patchCreatis.tar.gz
-## tar -xzvf VTK-5.6.1.patchCreatis.tar.gz
- wget http://www.vtk.org/files/release/5.10/vtk-5.10.1.zip
-
-echo unzip vtk-5.10.1.zip
-pwd
- unzip vtk-5.10.1.zip
-
- cd VTK5.10.1/Rendering
-##EED19mai2015 wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/vtk-5.10.1.vtkXOpenGLRenderWindow.patch
- wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/vtk-5.10.1.vtkXOpenGLRenderWindow.patch
- patch < vtk-5.10.1.vtkXOpenGLRenderWindow.patch
-
- cd ../CMake
- wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/vtk-5.10.1.vtkCompilerExtras.cmake-PATCH
- patch < vtk-5.10.1.vtkCompilerExtras.cmake-PATCH
-
- fi
-
-
+## if [ $OperatingSystem = "MacOS" ]
+## then
+##
+## # EED 2013-10-29
+## # curl -O http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/VTK-5.6.1.patchCreatis.tar.gz
+## # # MacOS, clever enough to understand it *has* to uncompress, doesn't understand tar -z :-(
+## # tar -xvf VTK-5.6.1.patchCreatis.tar.gz
+##
+## curl -O http://www.vtk.org/files/release/5.10/vtk-5.10.1.zip
+## unzip vtk-5.10.1.zip
+## cd VTK5.10.1/Rendering
+## curl -O http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/vtk-5.10.1.vtkXOpenGLRenderWindow.patch
+## patch < vtk-5.10.1.vtkXOpenGLRenderWindow.patch
+## # MacOS, clever enough to understand it *has* to uncompress, doesn't understand tar -z :-(
+## else
+##
+## ## EED 2013-10-29
+## ## wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/VTK-5.6.1.patchCreatis.tar.gz
+## ## tar -xzvf VTK-5.6.1.patchCreatis.tar.gz
+##
+## ## EED 2016-12-28
+## ## wget http://www.vtk.org/files/release/5.10/vtk-5.10.1.zip
+## ## echo unzip vtk-5.10.1.zip
+## ## pwd
+## ## unzip vtk-5.10.1.zip
+## ## cd VTK5.10.1/Rendering
+## ####EED19mai2015 wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/vtk-5.10.1.vtkXOpenGLRenderWindow.patch
+## ## wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/vtk-5.10.1.vtkXOpenGLRenderWindow.patch
+## ## patch < vtk-5.10.1.vtkXOpenGLRenderWindow.patch
+## ## cd ../CMake
+## ## wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/vtk-5.10.1.vtkCompilerExtras.cmake-PATCH
+## ## patch < vtk-5.10.1.vtkCompilerExtras.cmake-PATCH
+##
+## ## wget http://www.vtk.org/files/release/7.1/VTK-7.1.0.zip
+## wget https://www.vtk.org/files/release/8.1/VTK-8.1.1.zip
+## unzip VTK-8.1.1.zip
+##
+## fi
+
+ wget https://www.vtk.org/files/release/8.1/VTK-8.1.1.zip
+ unzip VTK-8.1.1.zip
#if [ $buildType = "Debug" ]
# debug="OFF"
#fi
+### the following stupid test is used at debug time; Please don't remove!
+###if [ true = false ]
+##if [ true = true ]
+##then
+## libname=VTK5.10.1
+## dirInstall=$binDir/$libname-Bin
+#### export VTK_DIR=$installPrefixThird/lib/vtk-5.6/
+## export VTK_DIR=$installPrefixThird/lib/vtk-5.10/
+##
+## mkdir -p $dirInstall
+## echo "we prepare directories dirInstall " $dirInstall " VTK_DIR " $installPrefixThird/lib/vtk-5.10.1/
+## cd $dirInstall
+##
+### See EED why we have to do this
+## if [ $OperatingSystem = "MacOS" ]
+## then
+## cmake -D CMAKE_CXX_COMPILER:FILE=/usr/bin/g++
+## fi
+## cmake -G"Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
+## ##cmake -G"CodeBlocks - Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
+## cmake -D CMAKE_BUILD_TYPE:STRING=$buildType -D CMAKE_INSTALL_PREFIX:PATH=$installPrefixThird CMakeCache.txt
+##
+## if [ $OperatingSystem = "MacOS" ]
+## then
+## cmake -D BUILD_SHARE_LIBS:BOOL=ON -D VTK_USE_CARBON:BOOL=ON -D VTK_USE_COCOA:BOOL=OFF CMakeCache.txt
+## cmake -D VTK_USE_TCL:BOOL=OFF CMakeCache.txt
+## CMakeCache.txt
+## fi
+##
+## cmake -D BUILD_EXAMPLES:BOOL=OFF -D BUILD_TESTING:BOOL=OFF -D BUILD_SHARED_LIBS:BOOL=ON -D VTK_USE_QT:BOOL=ON CMakeCache.txt
+## cmake -D CMAKE_CXX_FLAGS:STRING='-std=c++03' CMakeCache.txt
+##
+####EED 2016-12-22 make -j $corenumber
+## make -j $corenumber
+## make -j $corenumber install
+## cd ..
+##fi
+
+
# the following stupid test is used at debug time; Please don't remove!
#if [ true = false ]
if [ true = true ]
then
- libname=VTK5.10.1
+ libname=VTK-8.1.1
+ libnameB=vtk-8.1
dirInstall=$binDir/$libname-Bin
## export VTK_DIR=$installPrefixThird/lib/vtk-5.6/
- export VTK_DIR=$installPrefixThird/lib/vtk-5.10/
+ export VTK_DIR=$installPrefixThird/lib/cmake/$libnameB/
mkdir -p $dirInstall
- echo "we prepare directories dirInstall " $dirInstall " VTK_DIR " $installPrefixThird/lib/vtk-5.10.1/
+ echo "we prepare directories dirInstall " $dirInstall " VTK_DIR " $installPrefixThird/lib/$libnameB/
cd $dirInstall
# See EED why we have to do this
then
cmake -D CMAKE_CXX_COMPILER:FILE=/usr/bin/g++
fi
+
cmake -G"Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
##cmake -G"CodeBlocks - Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
cmake -D CMAKE_BUILD_TYPE:STRING=$buildType -D CMAKE_INSTALL_PREFIX:PATH=$installPrefixThird CMakeCache.txt
if [ $OperatingSystem = "MacOS" ]
then
- cmake -D BUILD_SHARE_LIBS:BOOL=ON -D VTK_USE_CARBON:BOOL=ON -D VTK_USE_COCOA:BOOL=OFF CMakeCache.txt
+ cmake -D BUILD_SHARE_LIBS:BOOL=ON -D VTK_USE_CARBON:BOOL=OFF -D VTK_USE_COCOA:BOOL=ON CMakeCache.txt
cmake -D VTK_USE_TCL:BOOL=OFF CMakeCache.txt
CMakeCache.txt
fi
- cmake -D BUILD_EXAMPLES:BOOL=OFF -D BUILD_TESTING:BOOL=OFF -D BUILD_SHARED_LIBS:BOOL=ON -D VTK_USE_QT:BOOL=ON CMakeCache.txt
- cmake -D CMAKE_CXX_FLAGS:STRING=-std=${stdCompiler} CMakeCache.txt
+ cmake -D VTK_Group_Views:BOOL=ON -D VTK_Group_Qt:BOOL=ON CMakeCache.txt
+ cmake -D BUILD_EXAMPLES:BOOL=OFF -D BUILD_TESTING:BOOL=OFF -D BUILD_SHARED_LIBS:BOOL=ON CMakeCache.txt
+ cmake -D VTK_Group_Views:BOOL=ON -D VTK_Group_Qt:BOOL=OFF CMakeCache.txt
-##EED 2016-12-22 make -j $corenumber
make -j $corenumber
make -j $corenumber install
cd ..
+
fi
+
+
+
+
+
cd $sourcesDir
echo "we download new stuff"
- if [ $OperatingSystem = "MacOS" ]
- then
-
- curl -O http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/wt-3.3.4.tar.gz
- tar -xvzf wt-3.3.4.tar.gz
- # MacOS, clever enough to understand it *has* to uncompress, doesn't understand tar -z :-(
- else
- wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/wt-3.3.4.tar.gz
- echo tar -xvzf wt-3.3.4.tar.gz
- pwd
- tar -xvzf wt-3.3.4.tar.gz
- fi
+
+## if [ $OperatingSystem = "MacOS" ]
+## then
+## # curl -O http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/wt-3.3.4.tar.gz
+## # tar -xvzf wt-3.3.4.tar.gz
+## curl -O http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/wt-4.0.4-rc1.tar.gz
+## tar -xvzf wt-4.0.4-rc1.tar.gz
+## # MacOS, clever enough to understand it *has* to uncompress, doesn't understand tar -z :-(
+## else
+## # wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/wt-3.3.4.tar.gz
+## # tar -xvzf wt-3.3.4.tar.gz
+## fi
+
+ wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/wt-4.0.4-rc1.tar.gz
+ tar -xvzf wt-4.0.4-rc1.tar.gz
#if [ $buildType = "Debug" ]
#if [ true = false ]
if [ true = true ]
then
- libname=wt-3.3.4
+## libname=wt-3.3.4
+ libname=wt-4.0.4-rc1
dirInstall=$binDir/$libname-Bin
-## export VTK_DIR=$installPrefixThird/lib/vtk-5.6/
- export WT_DIR=$installPrefixThird/lib/wt-3.3.4/
+## export WT_DIR=$installPrefixThird/lib/wt-3.3.4/
+ export WT_DIR=$installPrefixThird/lib/$libname
mkdir -p $dirInstall
- echo "we prepare directories dirInstall " $dirInstall " WT_DIR " $installPrefixThird/lib/wt-3.3.4/
+ echo "we prepare directories dirInstall " $dirInstall " WT_DIR " $installPrefixThird/lib/$libname/
cd $dirInstall
# See EED why we have to do this
cmake -G"Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
##cmake -G"CodeBlocks - Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
cmake -D CMAKE_BUILD_TYPE:STRING=$buildType -D CMAKE_INSTALL_PREFIX:PATH=$installPrefixThird CMakeCache.txt
- cmake -D LIB_INSTALL_DIR:PATH=lib/$libname -D ENABLE_EXT:BOOL=true ENABLE_MYSQL:BOOL=false CMakeCache.txt
- cmake -D BUILD_TESTS:BOOL=false CMakeCache.txt
+ cmake -D LIB_INSTALL_DIR:PATH=lib/$libname -D ENABLE_EXT:BOOL=ON ENABLE_MYSQL:BOOL=OFF CMakeCache.txt
+ cmake -D BUILD_TESTS:BOOL=OFF CMakeCache.txt
# if [ $OperatingSystem = "MacOS" ]
# then
# ###
make -j $corenumber
su -c 'make install'
+ sudo make install
cd ..
fi
if [ `getDistrib` == "CentOS" ] && [ `getKernelVersion` < "2.6.34" ]
then
stdCompiler=c++98
- else
- stdCompiler=c++03
+# else
+# stdCompiler=c++11
fi
cd $sourcesDir
echo "we download new stuff"
- if [ $OperatingSystem = "MacOS" ]
- then
- curl -O http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/gdcm_05_Mai_2011.tar.gz
- # MacOS, clever enough to understand it *has* to uncompress, doesn't understand tar -z :-(
- tar -xvf gdcm_05_Mai_2011.tar.gz
- else
-##19mai2015 wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/gdcm_05_Mai_2011.tar.gz
- wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/gdcm_05_Mai_2011.tar.gz
- tar -xvzf gdcm_05_Mai_2011.tar.gz
- fi
+
+## if [ $OperatingSystem = "MacOS" ]
+## then
+## curl -O http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/gdcm_05_Mai_2011.tar.gz
+## # MacOS, clever enough to understand it *has* to uncompress, doesn't understand tar -z :-(
+## tar -xvf gdcm_05_Mai_2011.tar.gz
+## else
+## ##19mai2015 wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/gdcm_05_Mai_2011.tar.gz
+##
+## ##VTK-5
+## # wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/gdcm_05_Mai_2011.tar.gz
+## # tar -xvzf gdcm_05_Mai_2011.tar.gz
+##
+## # wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/gdcm_10_Mars_2017-vtk7.tar.gz
+## # tar -xvzf gdcm13_2018_05_28_vtk8.tar.gz
+## fi
+
+ wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/gdcm13_2019_06_17_vtk8.zip
+ unzip gdcm13_2019_06_17_vtk8.zip
if [ $buildType = "Debug" ]
then
#if [ true = false ]
if [ true = true ]
then
- libname=gdcm
+ libname=gdcm13
dirInstall=$binDir/$libname-Bin
export GDCM_DIR=$installPrefixThird/lib/gdcm/
mkdir -p $dirInstall
--- /dev/null
+# ---------------------------------------------------------------------
+#
+# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
+# pour la Santé)
+# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
+#
+# This software is governed by the CeCILL-B license under French law and
+# abiding by the rules of distribution of free software. You can use,
+# modify and/ or redistribute the software under the terms of the CeCILL-B
+# license as circulated by CEA, CNRS and INRIA at the following URL
+# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+# or in the file LICENSE.txt.
+#
+# As a counterpart to the access to the source code and rights to copy,
+# modify and redistribute granted by the license, users are provided only
+# with a limited warranty and the software's author, the holder of the
+# economic rights, and the successive licensors have only limited
+# liability.
+#
+# The fact that you are presently reading this means that you have had
+# knowledge of the CeCILL-B license and that you accept its terms.
+# ------------------------------------------------------------------------
+
+
+#!/bin/bash
+
+ if [ ! -f $PWD/scripts/CreaTools-configure.sh ]
+ then
+ echo
+ echo "..ERROR.."
+ echo "==================================================="
+ echo "REMEMBER !"
+ echo ""
+ echo "YOU NEED TO RUN 'Configure' (0) First !"
+ echo "==================================================="
+ echo
+ echo
+ exit 0
+fi
+
+source $PWD/scripts/CreaTools-configure.sh
+#EED 2017-03-24
+ source $PWD/scripts/LocalFunctions.sh
+ if [ `getDistrib` == "CentOS" ] && [ `getKernelVersion` < "2.6.34" ]
+ then
+ stdCompiler=c++98
+ else
+ stdCompiler=c++03
+ fi
+
+
+ echo "------"
+ echo $PWD/scripts/CreaTools-configure.sh
+ echo --generationdir--
+ echo $generationdir
+ echo --docgeneration--
+ echo $docgeneration
+ echo --installPrefix--
+ echo $installPrefix
+ echo --installPrefixThird--
+ echo $installPrefixThird
+ echo --buildType--
+ echo $buildType
+ echo --gdcmVersion--
+ echo $gdcmVersion
+# echo --sourcesFrom--
+# echo $sourcesFrom
+# echo --scriptDir--
+# echo $scriptDir
+# echo --start_point--
+# echo $start_point
+ echo "------"
+
+
+scriptDir=$PWD
+sourcesDir=$generationdir/thirdparty_sources
+binDir=$generationdir/thirdparty_bin
+
+if [ ! -e $generationdir ]
+then
+ mkdir -p $generationdir
+ chown -R $loginUserName $generationdir
+ chgrp -R $loginGroupName $generationdir
+
+fi
+if [ ! -e $sourcesDir ]
+then
+ mkdir -p $sourcesDir
+ #was : (pb on MacOS?)
+ #chown -R $loginUserName:$loginGroupName $sourcesDir
+ chown -R $loginUserName $sourcesDir
+ chgrp -R $loginGroupName $sourcesDir
+fi
+
+if [ ! -e $binDir ]
+then
+ mkdir -p $binDir
+ chown -R $loginUserName $binDir
+ chgrp -R $loginGroupName $binDir
+fi
+
+ echo "we remove old stuff"
+ rm -rf $sourcesDir/gdcm*
+ rm -rf $binDir/gdcm*
+
+ cd $sourcesDir
+
+ echo "we download new stuff"
+ if [ $OperatingSystem = "MacOS" ]
+ then
+ curl -O http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/gdcm_05_Mai_2011.tar.gz
+ # MacOS, clever enough to understand it *has* to uncompress, doesn't understand tar -z :-(
+ tar -xvf gdcm_05_Mai_2011.tar.gz
+ else
+##19mai2015
+# wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/gdcm_05_Mai_2011.tar.gz
+#EED 2017-08-29 itk3toitk4
+# wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/gdcm_05_Mai_2011.tar.gz
+# tar -xvzf gdcm_05_Mai_2011.tar.gz
+
+ wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/gdcm-2.8.2.tar.gz
+ tar -xvzf gdcm-2.8.2.tar.gz
+
+ fi
+
+if [ $buildType = "Debug" ]
+then
+ debug="ON"
+else
+ debug="OFF"
+fi
+
+# the following stupid test is used at debug time; Please don't remove!
+#if [ true = false ]
+if [ true = true ]
+then
+ libname=gdcm-2.8.2
+ dirInstall=$binDir/$libname-Bin
+ export GDCM_DIR=$installPrefixThird/lib/gdcm/
+ mkdir -p $dirInstall
+ cd $dirInstall
+
+ cmake -G"Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
+ ##cmake -G"CodeBlocks - Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
+
+ cmake -D CMAKE_BUILD_TYPE:STRING=$buildType -D CMAKE_INSTALL_PREFIX:PATH=$installPrefixThird CMakeCache.txt
+ cmake -D VTK_DIR:PATH=$VTK_DIR CMakeCache.txt
+ cmake -D GDCM_USE_VTK:BOOL=ON CMakeCache.txt
+ cmake -D CMAKE_CXX_FLAGS:STRING=-std=${stdCompiler} CMakeCache.txt
+
+ make -j $corenumber
+ make -j $corenumber install
+ cd ..
+fi
+
+#if [ true = false ]
+if [ true = true ]
+then
+ cd $sourcesDir
+ cp tth $installPrefixThird/bin
+fi
+
+
+# deal with create creatools_third_party_libraries_config.sh
+# is now done in ThirdParty-install-Finalize.sh
+
echo $3
echo $4
-make -j $4
+#let halfProcessors=$( $4/2 )
+make -j $4 $5
# We don't install immediately!
binfolder=$2/creatools_bin/$1Bin
cd $binfolder
+ if [ $OperatingSystem = "MacOS" ]
+ then
+ cmake -D CMAKE_CXX_COMPILER:FILE=/usr/bin/g++
+
+## /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++
+
+ fi
cmake -D CMAKE_CXX_FLAGS:STRING=-fPIC -D CMAKE_CXX_FLAGS:STRING=-fopenmp CMakeCache.txt
cmake -D BBTK_DIR:PATH=$currentdir/creatools_bin/bbtkBin CMakeCache.txt
binfolder=$2/creatools_bin/$1Bin
cd $binfolder
-cmake -D CMAKE_CXX_FLAGS:STRING=-fPIC -D CREA_BUILD_VTK:BOOL=ON -D CREA_BUILD_WX:BOOL=ON CMakeCache.txt
+
+if [[ "$OSTYPE" == "linux-gnu" ]]; then
+ cxxFlags='-fPIC'
+elif [[ "$OSTYPE" == "darwin" ]]; then
+ cxxFlags='-fPIC -ObjC++C'
+fi
+
+
+cmake -D CMAKE_CXX_FLAGS:STRING=$cxxFlags -D CREA_BUILD_VTK:BOOL=ON -D CREA_BUILD_WX:BOOL=ON CMakeCache.txt
cmake CMakeCache.txt
cmake CMakeCache.txt
binfolder=$2/creatools_bin/$1Bin
cd $binfolder
-cmake -D CMAKE_CXX_FLAGS:STRING=-fPIC CMakeCache.txt
+cmake -D CMAKE_CXX_FLAGS:STRING=-fPIC -fopenmp CMakeCache.txt
cmake -D BBTK_DIR:PATH=$currentdir/creatools_bin/bbtkBin CMakeCache.txt
cmake -D crea_DIR:PATH=$currentdir/creatools_bin/creaBin CMakeCache.txt
cmake -D BUILD_BBTK_PACKAGE_creaVtk:BOOL=ON CMakeCache.txt
# We install, now
pwd
+make -j $5 install
make install
if [ -e $installPrefix/lib64 ]
git://git.creatis.insa-lyon.fr / creaToolsTools.git / commitdiff