* PrintFile
-
- Displays the header of any kind of ACR-NEMA/PAPYRUS/DICOM File
- usage: PrintFile {filein=inputFileName|dirin=inputDirectoryName}[level=n]
- [forceload=listOfElementsToForceLoad]
- [4DLoc= ][dict= privateDirectory]
- [ { [noshadowseq] | [noshadow][noseq] } ]
- [debug] [warning]
+
+ Display the header of a ACR-NEMA/PAPYRUS/DICOM File
+ usage: PrintFile {filein=inputFileName|dirin=inputDirectoryName}[level=n]
+ [forceload=listOfElementsToForceLoad] [rec] [noex]
+ [4DLoc= ][dict= privateDirectory]
+ [ { [noshadowseq] | [noshadow][noseq] } ]
+ [debug] [warning]
level = 0,1,2 : depending on the amount of details user wants to see
+ rec : user wants to parse recursively the directory
+ noex : user doen't want extra 'user friendly' info
4DLoc: group-elem(in hexa, no space) of the DataEntry holdind 4thDim
listOfElementsToForceLoad : group-elem,g2-e2,... (in hexa, no space)
- of Elements to load whatever their length
- privateDirectory : source file full path name of Shadow Group elems
- noshadowseq: user doesn't want to load Private Sequences
- noshadow : user doesn't want to load Private groups (odd number)
- noseq : user doesn't want to load Sequences
- debug : user wants to run the program in 'debug mode'
- warning : user wants to be warned about any oddity in the File
- showlut :user wants to display the Palette Color (as an int array)
-
- [ { [noshadowseq] | [noshadow][noseq] } ] [debug] [usage]
- level = 0,1,2 : depending on the amount of details user wants to see
- noshadowseq: user doesn't want to load Private Sequences
- noshadow : user doesn't want to load Private groups (odd number)
- noseq : user doesn't want to load Sequences
- debug : user wants to run the program in 'debug mode'
- usage : user wants to display usage
-
+ of Elements to load whatever their length
+ privateDirectory : source file full path name of Shadow Group elems
+ noshadowseq: user doesn't want to load Private Sequences
+ noshadow : user doesn't want to load Private groups (odd number)
+ noseq : user doesn't want to load Sequences
+ debug : user wants to run the program in 'debug mode'
+ warning : user wants to be warned about any oddity in the File
+ showlut :user wants to display the Palette Color (as an int array)
* Anonymize
* ReWrite
- Reads and rewrites a full gdcm-readable Dicom image
- (usefull when the file header is not very straight).
-
- usage: ReWrite filein=inputFileName fileout=outputFileName
- [keepoverlays] [mode=write mode] [monochrome1]
- [noshadow] [noseq][debug]
- --> The following line to 'rubout' a burnt-in Patient name
- [rubout=xBegin,xEnd,yBegin,yEnd [ruboutvalue=n (<255)] ]
- --> The 2 following lines, to extract a sub image within some frames
- [ROI=xBegin,xEnd,yBegin,yEnd]
- [firstframe=beg] [lastframe=end]
-
- mode = a (ACR), x (Explicit VR Dicom), r (RAW : only pixels)
- j (jpeg lossless), 2 (jpeg2000)
- keepoverlays : user wants to keep ACR-NEMA-like overlays
- monochrome1 = user wants MONOCHROME1 photom. interp. (0=white)
- noshadowseq: user doesn't want to load Private Sequences
+ Re write a full gdcm-readable Dicom image
+ (usefull when the file header is not very straight).
+
+ usage: ReWrite filein=inputFileName fileout=outputFileName
+ [keepoverlays] [mode=write mode] [monochrome1]
+ [noshadow] [noseq][debug]
+ --> The following line to 'rubout' a burnt-in Patient name
+ [rubout=xBegin,xEnd,yBegin,yEnd [ruboutvalue=n (<255)] ]
+ --> The 2 following lines, to extract a sub image within some frames
+ [ROI=xBegin,xEnd,yBegin,yEnd]
+ [firstframe=beg] [lastframe=end]
+
+ mode = a (ACR), x (Explicit VR Dicom), r (RAW : only pixels)
+ j (jpeg lossless), 2 (jpeg2000)
+ keepoverlays : user wants to keep ACR-NEMA-like overlays
+ monochrome1 = user wants MONOCHROME1 photom. interp. (0=white)
+ noshadowseq: user doesn't want to load Private Sequences
noshadow : user doesn't want to load Private groups (odd number)
- noseq : user doesn't want to load Sequences
- rgb : user wants to transform LUT (if any) to RGB pixels
+ noseq : user doesn't want to load Sequences
+ rgb : user wants to transform LUT (if any) to RGB pixels
warning : developper wants to run the program in 'warning mode'
- debug : developper wants to run the program in 'debug mode' a full gdcm-readable Dicom image (compressed Pixels are expanded)
- (usefull when the file is not very straight).
- usage: ReWrite filein=inputFileName fileout=anonymizedFileName
- [mode=write mode] [rgb]
- [ { [noshadowseq] | [noshadow][noseq] } ] [debug] [usage]
- write mode = a (ACR), x (Explicit VR Dicom), r (RAW : only pixels)
- rgb : user wants to transform LUT (if any) into RGB
- noshadowseq: user doesn't want to load Private Sequences
- noshadow : user doesn't want to load Private groups (odd number)
- noseq : user doesn't want to load Sequences
- debug : user wants to run the program in 'debug mode'
- usage : user wants to display usage
-
+ debug : developper wants to run the program in 'debug mode'
* PrintDicomDir
usage : user wants to display usage
+ * exXCoherentFileSet :
+
+Shows the various 'XCoherent' Filesets within a directory
+Optionaly copies the images in a Directories tree
+usage: exXCoherentFileSet {dirin=inputDirectoryName}
+ dirout=outputDirectoryName
+ { tag=group-elem | pos | ori } [sort] [write]
+ [ { [noshadowseq] | [noshadow][noseq] } ] [debug]
+
+ dirin : user wants to analyze *all* the files
+ within the directory
+ write : user wants to create directories
+ dirout : will be created if doesn't exist
+ pos : user wants to split each Single SerieUID Fileset on the
+ 'Image Position '
+ ori : user wants to split each Single SerieUID Fileset on the
+ 'Image Orientation '
+ tag : group-elem (in hexa, no space)
+ the user wants to split on
+ sort : user wants FileHelper to sort the images
+ Warning : will probabely crah if sort has no meaning
+ (not only look at image names)
+ noshadowseq: user doesn't want to load Private Sequences
+ noshadow : user doesn't want to load Private groups (odd number)
+ noseq : user doesn't want to load Sequences
+ verbose : user wants to run the program in 'verbose mode'
+ debug : developper wants to run the program in 'debug mode'
+
}}}
</pre>
projects / gdcm.git / commitdiff