From: jef <jef>
Date: Fri, 23 Jul 2010 13:11:31 +0000 (+0000)
Subject: *** empty log message ***
X-Git-Tag: v1.2.0~490
X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=commitdiff_plain;h=055956a3c0a50023358e5bcd5bfa08660a2810d1;p=clitk.git

*** empty log message ***
---

diff --git a/tools/clitkBinarizeImage.cxx b/tools/clitkBinarizeImage.cxx
deleted file mode 100644
index 0d5b7c2..0000000
--- a/tools/clitkBinarizeImage.cxx
+++ /dev/null
@@ -1,41 +0,0 @@
-/*=========================================================================
-  Program:   vv                     http://www.creatis.insa-lyon.fr/rio/vv
-
-  Authors belong to:
-  - University of LYON              http://www.universite-lyon.fr/
-  - Léon Bérard cancer center       http://oncora1.lyon.fnclcc.fr
-  - CREATIS CNRS laboratory         http://www.creatis.insa-lyon.fr
-
-  This software is distributed WITHOUT ANY WARRANTY; without even
-  the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
-  PURPOSE.  See the copyright notices for more information.
-
-  It is distributed under dual licence
-
-  - BSD        See included LICENSE.txt file
-  - CeCILL-B   http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-======================================================================-====*/
-
-// clitk
-#include "clitkBinarizeImage_ggo.h"
-#include "clitkBinarizeImageGenericFilter.h"
-
-//--------------------------------------------------------------------
-int main(int argc, char * argv[])
-{
-
-  // Init command line
-  GGO(clitkBinarizeImage, args_info);
-  CLITK_INIT;
-
-  // Filter
-  typedef clitk::BinarizeImageGenericFilter<args_info_clitkBinarizeImage> FilterType;
-  FilterType::Pointer filter = FilterType::New();
-
-  filter->SetArgsInfo(args_info);
-  filter->Update();
-
-  return EXIT_SUCCESS;
-}// end main
-
-//--------------------------------------------------------------------
diff --git a/tools/clitkImageFillRegion.cxx b/tools/clitkImageFillRegion.cxx
deleted file mode 100644
index fbb67aa..0000000
--- a/tools/clitkImageFillRegion.cxx
+++ /dev/null
@@ -1,114 +0,0 @@
-/*=========================================================================
-  Program:   vv                     http://www.creatis.insa-lyon.fr/rio/vv
-
-  Authors belong to:
-  - University of LYON              http://www.universite-lyon.fr/
-  - Léon Bérard cancer center       http://oncora1.lyon.fnclcc.fr
-  - CREATIS CNRS laboratory         http://www.creatis.insa-lyon.fr
-
-  This software is distributed WITHOUT ANY WARRANTY; without even
-  the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
-  PURPOSE.  See the copyright notices for more information.
-
-  It is distributed under dual licence
-
-  - BSD        See included LICENSE.txt file
-  - CeCILL-B   http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-======================================================================-====*/
-#ifndef CLITKIMAGEREGIONFILL_CXX
-#define CLITKIMAGEREGIONFILL_CXX
-/**
-   ------------------------------------------------=
-   * @file   clitkImageFillRegion.cxx
-   * @author David Sarrut <David.Sarrut@creatis.insa-lyon.fr>
-   * @date   23 Feb 2008
-   ------------------------------------------------=*/
-
-// clitk include
-#include "clitkImageFillRegion_ggo.h"
-#include "clitkImageFillRegionGenericFilter.h"
-#include "clitkIO.h"
-
-//--------------------------------------------------------------------
-int main(int argc, char * argv[])
-{
-
-  // Init command line
-  GGO(clitkImageFillRegion, args_info);
-  CLITK_INIT;
-
-  // Read image dimension
-  itk::ImageIOBase::Pointer header = clitk::readImageHeader(args_info.input_arg);
-  unsigned int dim = header->GetNumberOfDimensions();
-
-  // Main filter
-  clitk::ImageFillRegionGenericFilter filter;
-  filter.SetInputFilename(args_info.input_arg);
-  filter.SetOutputFilename(args_info.output_arg);
-  filter.SetFillPixelValue(args_info.value_arg);
-
-  if(!args_info.ellips_flag && !args_info.rect_flag) {
-    std::cerr << "ERROR : No type of region specified!"<< std::endl;
-    exit(-1);
-  }
-
-  if(args_info.ellips_flag && args_info.rect_flag) {
-    std::cerr << "ERROR : Multiple types of regions specified!"<< std::endl;
-    exit(-1);
-  }
-
-  if(args_info.rect_flag) {
-    if (args_info.size_given && args_info.start_given) {
-      // Check parameters
-      if (args_info.size_given != dim) {
-        std::cerr << "ERROR : image has " << dim << "dimensions, --size should have the same number of values." << std::endl;
-        exit(-1);
-      }
-      if (args_info.start_given != dim) {
-        std::cerr << "ERROR : image has " << dim << "dimensions, --size should have the same number of values." << std::endl;
-        exit(-1);
-      }
-      filter.SetRegion(args_info.size_arg, args_info.start_arg);
-    } else {
-      std::cerr << "ERROR : both size and start should be given!"<< std::endl;
-      exit(-1);
-    }
-  }
-
-  if(args_info.ellips_flag) {
-
-    std::vector<double> c, a;
-    if (args_info.center_given) {
-      if (args_info.center_given != dim) {
-        std::cerr << "ERROR : image has " << dim << "dimensions, --center should have the same number of values." << std::endl;
-        exit(-1);
-      }
-      for(unsigned int i=0; i<dim; i++)
-        c.push_back(args_info.center_arg[i]);
-    }
-
-    if (args_info.axes_given) {
-      if (args_info.axes_given != dim) {
-        std::cerr << "ERROR : image has " << dim << "dimensions, --axes should have the same number of values." << std::endl;
-        exit(-1);
-      }
-      for(unsigned int i=0; i<dim; i++)
-        a.push_back(args_info.axes_arg[i]);
-
-    } else
-      for(unsigned int i=0; i<dim; i++)
-        a.push_back(10.0);
-
-    if ((args_info.center_given))
-      filter.SetSphericRegion(a,c);
-    else
-      filter.SetSphericRegion(a);
-  }
-
-  filter.Update();
-
-  // this is the end my friend
-  return 0;
-} // end main
-
-#endif //define CLITKIMAGEREGIONFILL
diff --git a/tools/clitkImageFillRegion.ggo b/tools/clitkImageFillRegion.ggo
deleted file mode 100644
index e0baa88..0000000
--- a/tools/clitkImageFillRegion.ggo
+++ /dev/null
@@ -1,20 +0,0 @@
-#File  clitkImageFillRegion.ggo
-package "clitkImageFillRegion"
-version "1.0"
-purpose "Fill a region (rectangular or ellipsoide) with a value inside an image."
-
-
-option "config"    -	"Config file"  		  string   no
-option "input"	   i 	"Input image filename"	  string   yes
-option "output"    o 	"Output image filename"	  string   yes
-option "verbose"   v 	"Verbose"		  flag	   off
-
-option "rect"	   -	"Rectangular region"		  flag	off	
-option "size"      s 	"Size of the region (in pixel)"	  int multiple no
-option "start"     b 	"Start of the region(in pixel)"	  int multiple no
-
-option "ellips"	   -	"Ellipsoide region"		flag off	
-option "center"    c 	"Center of the sphere (in mm), defaults to middle of region"   double multiple no
-option "axes"      r 	"Half axes (in mm) of the ellips, defaults to 10"              double multiple no
-
-option "value"     p 	"Pixel value to fill the region"  double default="0" no