From: jpr Date: Tue, 29 Jun 2004 15:29:58 +0000 (+0000) Subject: removal of jpeglossles1.dcm (identical to gdcm-JPEG-LossLess3a.dcm) X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=commitdiff_plain;h=172acb2c1e6bc5cda7ebba321094947a82c7b74c;p=gdcmData.git removal of jpeglossles1.dcm (identical to gdcm-JPEG-LossLess3a.dcm) --- diff --git a/checkPrintHeader.sh b/checkPrintHeader.sh index 6686643..c2691d9 100755 --- a/checkPrintHeader.sh +++ b/checkPrintHeader.sh @@ -1,77 +1,81 @@ -gdcmCxxTests PrintHeader 00191113.dcm -gdcmCxxTests PrintHeader 012345.002.050.dcm -gdcmCxxTests PrintHeader 16BitsJpegLosslessGrayScale.dcm -gdcmCxxTests PrintHeader 16BitsRunLengthGrayScale.dcm -gdcmCxxTests PrintHeader 16BitsUncompressedGrayScale.dcm -gdcmCxxTests PrintHeader 24BitsJpegLosslessColor.dcm -gdcmCxxTests PrintHeader 24BitsJpegLossyColor.dcm -gdcmCxxTests PrintHeader 24BitsUncompressedColor.dcm -gdcmCxxTests PrintHeader 3E768EB7.dcmg -gdcmCxxTests PrintHeader 8078283Leonardo.dcm -gdcmCxxTests PrintHeader 8BitsJpegLossyGrayScale.dcm -gdcmCxxTests PrintHeader 8BitsRunLengthColor.dcm -gdcmCxxTests PrintHeader 8BitsRunLengthGrayScale.dcm -gdcmCxxTests PrintHeader 8BitsUncompressedColor.dcm -gdcmCxxTests PrintHeader 8BitsUncompressedGrayScale.dcm -gdcmCxxTests PrintHeader canadaAloka.dcm -gdcmCxxTests PrintHeader CLIP0001-Sequoia-U11.dcm -gdcmCxxTests PrintHeader cr172241.dcm -gdcmCxxTests PrintHeader cr_45031.dcm -gdcmCxxTests PrintHeader CR-MONO1-10-chest.dcm -gdcmCxxTests PrintHeader CT-MONO2-12-lomb-an2.acr2 -gdcmCxxTests PrintHeader CT-MONO2-16-ankle.dcm -gdcmCxxTests PrintHeader CT-MONO2-16-brain.dcm -gdcmCxxTests PrintHeader CT-MONO2-16-chest.dcm -gdcmCxxTests PrintHeader CT-MONO2-16-ort.dcm -gdcmCxxTests PrintHeader CT-MONO2-8-abdo.dcm -gdcmCxxTests PrintHeader DermaColorLossLess.dcm -gdcmCxxTests PrintHeader DicomSampleNastyGEImage.dcm -gdcmCxxTests PrintHeader FMAG0001.dcm -gdcmCxxTests PrintHeader fromTheralys.dcm -gdcmCxxTests PrintHeader gdcm-ACR-LibIDO.acr -gdcmCxxTests PrintHeader gdcm-CR-DCMTK-16-NonSamplePerPix.dcm -gdcmCxxTests PrintHeader gdcm-JPEG-Extended.dcm -gdcmCxxTests PrintHeader gdcm-JPEG-LossLess3a.dcm -gdcmCxxTests PrintHeader gdcm-JPEG-LossLessThoravision.dcm -gdcmCxxTests PrintHeader gdcm-MR-PHILIPS-16.dcm -gdcmCxxTests PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm -gdcmCxxTests PrintHeader gdcm-MR-PHILIPS-16-NonRectPix.dcm -gdcmCxxTests PrintHeader gdcm-MR-SIEMENS-16.acr1 -gdcmCxxTests PrintHeader gdcm-MR-SIEMENS-16.acr2 -gdcmCxxTests PrintHeader gdcm-RGB-LibIDORect.acr -gdcmCxxTests PrintHeader gdcm-US-ALOKA-16.dcm -gdcmCxxTests PrintHeader I9000001.dcm -gdcmCxxTests PrintHeader icone.dcm -gdcmCxxTests PrintHeader irmPhlipsNew1.dcm -gdcmCxxTests PrintHeader jpeg16Bits.dcm -gdcmCxxTests PrintHeader jpeglossles1.dcm -gdcmCxxTests PrintHeader jpeglossy1.dcm -gdcmCxxTests PrintHeader jpeglossy2.dcm -gdcmCxxTests PrintHeader mr176621.dcm -gdcmCxxTests PrintHeader MR.6799.1.dcm -gdcmCxxTests PrintHeader mriThruVPRO.dcm -gdcmCxxTests PrintHeader MR-MONO2-12-an2.acr2 -gdcmCxxTests PrintHeader MR-MONO2-12-angio-an1.acr1 -gdcmCxxTests PrintHeader MR-MONO2-12-shoulder.dcm -gdcmCxxTests PrintHeader MR-MONO2-16-head.dcm -gdcmCxxTests PrintHeader MR-MONO2-8-16x-heart.dcm -gdcmCxxTests PrintHeader multiframe1Integris.dcm -gdcmCxxTests PrintHeader multiframe2GE.dcm -gdcmCxxTests PrintHeader MxTwinLossLess.dcm -gdcmCxxTests PrintHeader newACR1000.nema -gdcmCxxTests PrintHeader NM-MONO2-16-13x-heart.dcm -gdcmCxxTests PrintHeader oldACR00001.ima -gdcmCxxTests PrintHeader OT-MONO2-8-a7.dcm -gdcmCxxTests PrintHeader OT-PAL-8-face.dcm -gdcmCxxTests PrintHeader QMAG0001.dcm -gdcmCxxTests PrintHeader RadBWLossLess.dcm -gdcmCxxTests PrintHeader sonataMonaco.dcm -gdcmCxxTests PrintHeader test.acr -gdcmCxxTests PrintHeader US.1.2.dcm -gdcmCxxTests PrintHeader US.3405.1.dcm -gdcmCxxTests PrintHeader US-MONO2-8-8x-execho.dcm -gdcmCxxTests PrintHeader US-PAL-8-10x-echo.dcm -gdcmCxxTests PrintHeader US-RGB-8-epicard.dcm -gdcmCxxTests PrintHeader US-RGB-8-esopecho.dcm -gdcmCxxTests PrintHeader xa_integris.dcm -gdcmCxxTests PrintHeader XA-MONO2-8-12x-catheter.dcm +#You can use this one as following : +#sh checkPrintDocument.sh | grep "\[OW\]" +#for checking the occurences of a given 'Value Representation' + +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 00191113.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 012345.002.050.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 16BitsJpegLosslessGrayScale.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 16BitsRunLengthGrayScale.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 16BitsUncompressedGrayScale.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 24BitsJpegLosslessColor.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 24BitsJpegLossyColor.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 24BitsUncompressedColor.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 3E768EB7.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 8078283Leonardo.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 8BitsJpegLossyGrayScale.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 8BitsRunLengthColor.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 8BitsRunLengthGrayScale.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 8BitsUncompressedColor.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument 8BitsUncompressedGrayScale.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument canadaAloka.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument CLIP0001-Sequoia-U11.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument cr172241.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument cr_45031.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument CR-MONO1-10-chest.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument CT-MONO2-12-lomb-an2.acr2 +/home/jpr/JUNK/gdcmbin/bin/PrintDocument CT-MONO2-16-ankle.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument CT-MONO2-16-brain.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument CT-MONO2-16-chest.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument CT-MONO2-16-ort.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument CT-MONO2-8-abdo.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument DermaColorLossLess.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument DicomSampleNastyGEImage.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument FMAG0001.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument fromTheralys.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-ACR-LibIDO.acr +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-CR-DCMTK-16-NonSamplePerPix.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-JPEG-Extended.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-JPEG-LossLess3a.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-JPEG-LossLessThoravision.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-MR-PHILIPS-16.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-MR-PHILIPS-16-Multi-Seq.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-MR-PHILIPS-16-NonRectPix.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-MR-SIEMENS-16.acr1 +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-MR-SIEMENS-16.acr2 +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-RGB-LibIDORect.acr +/home/jpr/JUNK/gdcmbin/bin/PrintDocument gdcm-US-ALOKA-16.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument I9000001.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument icone.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument irmPhlipsNew1.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument jpeg16Bits.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument jpeglossles1.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument jpeglossy1.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument jpeglossy2.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument mr176621.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument MR.6799.1.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument mriThruVPRO.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument MR-MONO2-12-an2.acr2 +/home/jpr/JUNK/gdcmbin/bin/PrintDocument MR-MONO2-12-angio-an1.acr1 +/home/jpr/JUNK/gdcmbin/bin/PrintDocument MR-MONO2-12-shoulder.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument MR-MONO2-16-head.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument MR-MONO2-8-16x-heart.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument multiframe1Integris.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument multiframe2GE.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument MxTwinLossLess.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument newACR1000.nema +/home/jpr/JUNK/gdcmbin/bin/PrintDocument NM-MONO2-16-13x-heart.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument oldACR00001.ima +/home/jpr/JUNK/gdcmbin/bin/PrintDocument OT-MONO2-8-a7.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument OT-PAL-8-face.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument QMAG0001.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument RadBWLossLess.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument sonataMonaco.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument test.acr +/home/jpr/JUNK/gdcmbin/bin/PrintDocument US.1.2.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument US.3405.1.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument US-MONO2-8-8x-execho.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument US-PAL-8-10x-echo.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument US-RGB-8-epicard.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument US-RGB-8-esopecho.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument xa_integris.dcm +/home/jpr/JUNK/gdcmbin/bin/PrintDocument XA-MONO2-8-12x-catheter.dcm diff --git a/checkRead.sh b/checkRead.sh index 28f7be2..d261d1d 100644 --- a/checkRead.sh +++ b/checkRead.sh @@ -12,107 +12,107 @@ # #No Swap Info #------------ -gdcmCxxTests testWrite mr176621.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite mr176621.dcm r; affim filein=mr176621.dcm.RAW DIMX=512 DIMY=512 nbit=16 # No Transfert Syntax #-------------------- #Big Endian -gdcmCxxTests testWrite cr172241.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite cr172241.dcm r; affim filein=cr172241.dcm.RAW DIMX=1792 DIMY=2392 nbit=16 zoom=-4 #0008,0200 (image location) wrongly stored #0028,3006 (LUT Data) has a CTX VR -gdcmCxxTests testWrite cr_45031.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite cr_45031.dcm r; affim filein=cr_45031.dcm.RAW DIMX=1670 DIMY=2010 nbit=16 zoom=-4 -gdcmCxxTests testWrite CR-MONO1-10-chest.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CR-MONO1-10-chest.dcm r; affim filein=CR-MONO1-10-chest.dcm.RAW DIMX=440 DIMY=440 nbit=16 -gdcmCxxTests testWrite CT-MONO2-12-lomb-an2.acr r; -affim filein=CT-MONO2-12-lomb-an2.acr.RAW DIM=512 nbit=16 +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-12-lomb-an2.acr2 r; +affim filein=CT-MONO2-12-lomb-an2.acr2.RAW DIM=512 nbit=16 -gdcmCxxTests testWrite gdcm-MR-SIEMENS-16-1.acr r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-MR-SIEMENS-16-1.acr r; affim filein=gdcm-MR-SIEMENS-16-1.acr.RAW DIMX=256 DIMY=256 nbit=16 -gdcmCxxTests testWrite gdcm-MR-SIEMENS-16-2.acr r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-MR-SIEMENS-16-2.acr r; affim filein=gdcm-MR-SIEMENS-16-2.acr.RAW DIMX=512 DIMY=512 nbit=16 -gdcmCxxTests testWrite MR-MONO2-12-an2.acr r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-12-an2.acr r; affim filein=MR-MONO2-12-an2.acr.RAW DIMX=256 DIMY=256 nbit=16 -gdcmCxxTests testWrite newACR1000.nema r; # == gdcmMR-SIEMENS-16.acr2 +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite newACR1000.nema r; # == gdcmMR-SIEMENS-16.acr2 affim filein=newACR1000.nema.RAW DIMX=512 DIMY=512 nbit=16 -gdcmCxxTests testWrite oldACR00001.ima r; # == gdcm-MR-SIEMENS.16.acr1 +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite oldACR00001.ima r; # == gdcm-MR-SIEMENS.16.acr1 affim filein=oldACR00001.ima.RAW DIMX=256 DIMY=256 nbit=16 -gdcmCxxTests testWrite OT-MONO2-8-a7.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite OT-MONO2-8-a7.dcm r; affim filein=OT-MONO2-8-a7.dcm.RAW DIMX=512 DIMY=512 #No Samples Per Pixel #-------------------- -gdcmCxxTests testWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm r; affim filein=gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.RAW dim=750 nbit=8 #Unnormalized Rectangular LibIDO format image #-------------------------------------------- -gdcmCxxTests testWrite gdcm-ACR-LibIDO.acr r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-ACR-LibIDO.acr r; affim filein=gdcm-ACR-LibIDO.acr.RAW dimx=512 dimy=301 #Bits Allocated =12, Bits Stored=12 #---------------------------------- #MR Philips (once upon a time in Lyon-Sud) -gdcmCxxTests testWrite MR-MONO2-12-angio-an1.acr r; -affim filein=MR-MONO2-12-angio-an1.acr.RAW dim=256 nbit=16 +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-12-angio-an1.acr1 r; +affim filein=MR-MONO2-12-angio-an1.acr1.RAW dim=256 nbit=16 #RGB #--- -gdcmCxxTests testWrite US.3405.1.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US.3405.1.dcm r; echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0" echo " PhotometricInterpretation=RGB" affim filein=US.3405.1.dcm.RAW DIMX=768 DIMY=576 nbit=24 -gdcmCxxTests testWrite OT-PAL-8-face.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite OT-PAL-8-face.dcm r; echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1" echo " PhotometricInterpretation=PALETTE COLOR" affim filein=OT-PAL-8-face.dcm.RAW dimx=640 dimy=480 nbit=24 -gdcmCxxTests testWrite 8BitsUncompressedColor.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 8BitsUncompressedColor.dcm r; affim filein=8BitsUncompressedColor.dcm.RAW dimx=800 dimy=535 nbit=24 # Implicit VR - Little Endian #----------------------------- -gdcmCxxTests testWrite CT-MONO2-16-ankle.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-16-ankle.dcm r; affim filein=CT-MONO2-16-ankle.dcm.RAW DIMX=512 DIMY=512 nbit=16 signe=o -gdcmCxxTests testWrite CT-MONO2-16-ort.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-16-ort.dcm r; affim filein=CT-MONO2-16-ort.dcm.RAW DIMX=512 DIMY=512 nbit=16 signe=o -gdcmCxxTests testWrite CT-MONO2-8-abdo.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-8-abdo.dcm r; affim filein=CT-MONO2-8-abdo.dcm.RAW DIMX=512 DIMY=512 -gdcmCxxTests testWrite gdcm-MR-PHILIPS-16.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-MR-PHILIPS-16.dcm r; affim filein=gdcm-MR-PHILIPS-16.dcm.RAW DIMX=256 DIMY=256 nbit=16 -gdcmCxxTests testWrite MR-MONO2-16-head.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-16-head.dcm r; affim filein=MR-MONO2-16-head.dcm.RAW dim=256 nbit=16 signe=o -gdcmCxxTests testWrite multiframe1Integris.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite multiframe1Integris.dcm r; affim filein=multiframe1Integris.dcm.RAW dim=1024 nbit=16 zoom=-2 affim filein=multiframe1Integris.dcm.RAW dim=1024 nbit=16 offset=31457280 zoom=-2 -gdcmCxxTests testWrite multiframe2GE.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite multiframe2GE.dcm r; affim filein=multiframe2GE.dcm.RAW dim=512 affim filein=multiframe2GE.dcm.RAW dim=512 offset=14417920 -gdcmCxxTests testWrite irmPhlipsNew1.dcm r; # == gdcm-MR-PHILIPS-16.dcm +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite irmPhlipsNew1.dcm r; # == gdcm-MR-PHILIPS-16.dcm affim DIMX=256 DIMY=256 filein=irmPhlipsNew1.dcm.RAW nbit=16 #avec imagette (icone) -gdcmCxxTests testWrite icone.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite icone.dcm r; affim filein=icone.dcm bypassacr=1 dim=512 nbit=16 offset=18240 affim filein=icone.dcm dim=64 offset=13984 bypassacr=1 affim filein=icone.dcm.RAW dim=512 nbit=16 @@ -125,40 +125,40 @@ affim filein=icone.dcm.RAW dim=512 nbit=16 #Explicit VR - Little Endian #---------------------------- -gdcmCxxTests testWrite CT-MONO2-16-brain.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-16-brain.dcm r; affim filein=CT-MONO2-16-brain.dcm.RAW DIMX=512 DIMY=512 nbit=16 signe=o # 7 'first level' SeQuences , 140 'second level' SeQuences ?!? -gdcmCxxTests testWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm r; affim filein=gdcm-MR-PHILIPS-16-Multi-Seq.dcm.RAW DIMX=128 DIMY=128 nbit=16 PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2 -gdcmCxxTests testWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm r; affim filein=gdcm-MR-PHILIPS-16-NonRectPix.dcm.RAW DIMX=160 DIMY=64 nbit=16 -gdcmCxxTests testWrite MR-MONO2-8-16x-heart.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-8-16x-heart.dcm r; affim filein=MR-MONO2-8-16x-heart.dcm.RAW DIMX=256 DIMY=256 -gdcmCxxTests testWrite NM-MONO2-16-13x-heart.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite NM-MONO2-16-13x-heart.dcm r; affim filein=NM-MONO2-16-13x-heart.dcm.RAW DIMX=64 DIMY=64 nbit=16 affim filein=NM-MONO2-16-13x-heart.dcm.RAW DIMX=64 DIMY=64 nbit=16 offset=98304 -gdcmCxxTests testWrite sonataMonaco.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite sonataMonaco.dcm r; affim filein=sonataMonaco.dcm.RAW DIMX=256 DIMY=208 nbit=16 #MultiFrame -gdcmCxxTests testWrite US-MONO2-8-8x-execho.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US-MONO2-8-8x-execho.dcm r; affim filein=US-MONO2-8-8x-execho.dcm.RAW DIMX=128 DIMY=120 affim filein=US-MONO2-8-8x-execho.dcm.RAW DIMX=128 DIMY=120 offset=92160 #RGB -gdcmCxxTests testWrite US-RGB-8-epicard.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US-RGB-8-epicard.dcm r; echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1" echo " PhotometricInterpretation=RGB" affim filein=US-RGB-8-epicard.dcm.RAW dimx=640 dimy=480 nbit=24 -gdcmCxxTests testWrite US-RGB-8-esopecho.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US-RGB-8-esopecho.dcm r; echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0" echo " PhotometricInterpretation=RGB" affim filein=US-RGB-8-esopecho.dcm.RAW dimx=256 dimy=120 nbit=24 @@ -167,57 +167,57 @@ affim filein=US-RGB-8-esopecho.dcm.RAW dimx=256 dimy=120 nbit=24 #-------------------------------------------------------------------------- # (JPEG Lossless) -gdcmCxxTests testWrite CT-MONO2-16-chest.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CT-MONO2-16-chest.dcm r; affim filein=CT-MONO2-16-chest.dcm.RAW dimx=512 dimy=400 nbit=16 signe=o -gdcmCxxTests testWrite 012345.002.050.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 012345.002.050.dcm r; affim filein=012345.002.050.dcm.RAW dim=256 nbit=16 -gdcmCxxTests testWrite gdcm-JPEG-LossLess3a.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-JPEG-LossLess3a.dcm r; affim filein=gdcm-JPEG-LossLess3a.dcm.RAW dim=512 nbit=16 -gdcmCxxTests testWrite XA-MONO2-8-12x-catheter.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite XA-MONO2-8-12x-catheter.dcm r; affim filein=XA-MONO2-8-12x-catheter.dcm.RAW dim=512; affim filein=XA-MONO2-8-12x-catheter.dcm.RAW dim=512 offset=262144 affim filein=XA-MONO2-8-12x-catheter.dcm.RAW dim=512 offset=2883584 -gdcmCxxTests testWrite xa_integris.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite xa_integris.dcm r; echo "a lot of fragments expected here" affim filein=xa_integris.dcm.RAW dim=512 affim filein=xa_integris.dcm.RAW dim=512 offset=13107200 affim filein=xa_integris.dcm.RAW dim=512 offset=19660800 -gdcmCxxTests testWrite 16BitsJpegLosslessGrayScale.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 16BitsJpegLosslessGrayScale.dcm r; affim filein=16BitsJpegLosslessGrayScale.dcm.RAW DIMX=800 DIMY=535 nbit=16 #comming from GE dlx via VTServer -gdcmCxxTests testWrite I9000001.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite I9000001.dcm r; affim filein=I9000001.dcm.RAW dim=512 affim filein=I9000001.dcm.RAW dim=512 offset=7864320 #JPEG Extended (Process 2 & 4) // 16 bits #----------------------------- -gdcmCxxTests testWrite gdcm-JPEG-Extended.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-JPEG-Extended.dcm r; affim filein=gdcm-JPEG-Extended.dcm.RAW dim=512 nbit=16 -gdcmCxxTests testWrite jpeglossy1.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite jpeglossy1.dcm r; affim filein=jpeglossy1.dcm.RAW dim=512 nbit=16 #JPEG Baseline (Process 14) #-------------------------- -gdcmCxxTests testWrite MR-MONO2-12-shoulder.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR-MONO2-12-shoulder.dcm r; affim filein=MR-MONO2-12-shoulder.dcm.RAW DIMX=1024 DIMY=1024 nbit=16 #fichier format ecat. -#gdcmCxxTests testWrite imageEcat.ecat r +#/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite imageEcat.ecat r #JPEG Lossy 8 bits #================= #JPEG Baseline (Process 1) #------------------------- # Bracco Files -gdcmCxxTests testWrite US.1.2.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US.1.2.dcm r; echo "expected : A lot of Fragments (40), nb Frames = 40 ;-)" echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0" echo " PhotometricInterpretation=YBR_FULL_422" @@ -226,7 +226,7 @@ affim filein=US.1.2.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=13271040 affim filein=US.1.2.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=39813120 #Sequoia Acusson U11 -gdcmCxxTests testWrite CLIP0001-Sequoia-U11.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite CLIP0001-Sequoia-U11.dcm r; echo "Troubles with 0018|6022[SL][Reference Pixel Y(0)] [4294967177] x(7fffffff)" affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24 @@ -236,24 +236,24 @@ affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=265 #RLE Lossless #------------- -gdcmCxxTests testWrite canadaAloka.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite canadaAloka.dcm r; echo "expected pixelType=8U SamplesPerPixel=1" echo " PlanarConfiguration=0 PhotometricInterpretation=MONOCHROME2" echo " nb Frames (DIMZ) : 1" affim filein=canadaAloka.dcm.RAW DIMX=608 DIMY=420 -gdcmCxxTests testWrite FMAG0001.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite FMAG0001.dcm r; echo "expected pixelType=8U SamplesPerPixel=3" echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL" echo " nb Frames (DIMZ) : 1" affim filein=FMAG0001.dcm.RAW DIMX=768 DIMY=576 nbit=24 -gdcmCxxTests testWrite QMAG0001.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite QMAG0001.dcm r; echo "expected pixelType=8U SamplesPerPixel=3" echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL" affim filein=QMAG0001.dcm.RAW DIMX=384 DIMY=288 nbit=24; -gdcmCxxTests testWrite US-PAL-8-10x-echo.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite US-PAL-8-10x-echo.dcm r; echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0" echo " PhotometricInterpretation=PALETTE COLOR" echo " nb Frames (DIMZ): 10" @@ -264,11 +264,11 @@ affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24 offset=774000 affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24 offset=1548000 affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24 offset=6966000 -gdcmCxxTests testWrite 8BitsRunLengthGrayScale.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 8BitsRunLengthGrayScale.dcm r; echo "expected : correct Gray image" affim filein=8BitsRunLengthGrayScale.dcm.RAW DIMX=800 DIMY=535 -gdcmCxxTests testWrite 8BitsRunLengthColor.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 8BitsRunLengthColor.dcm r; echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=2" echo " PhotometricInterpretation=PALETTE COLOR" echo "expected correct color image" @@ -276,7 +276,7 @@ affim filein=8BitsRunLengthColor.dcm.RAW DIMX=800 DIMY=535 nbit=24 #RLE 16 bits --> Try to find some more images -gdcmCxxTests testWrite 16BitsRunLengthGrayScale.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 16BitsRunLengthGrayScale.dcm r; echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0" echo " PhotometricInterpretation=MONOCHROME2" affim filein=16BitsRunLengthGrayScale.dcm.RAW DIMX=800 DIMY=535 nbit=16 @@ -285,47 +285,47 @@ affim filein=16BitsRunLengthGrayScale.dcm.RAW DIMX=800 DIMY=535 nbit=16 #-------------------------- #(break xmedcon) -gdcmCxxTests testWrite 00191113.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 00191113.dcm r; affim filein=00191113.dcm.RAW DIMX=512 DIMY=512 affim filein=00191113.dcm.RAW DIMX=512 DIMY=512 offset=786432 -gdcmCxxTests testWrite DermaColorLossLess.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite DermaColorLossLess.dcm r; affim filein=DermaColorLossLess.dcm.RAW DIMX=117 DIMY=181 nbit=24 -gdcmCxxTests testWrite RadBWLossLess.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite RadBWLossLess.dcm r; affim filein=RadBWLossLess.dcm.RAW DIMX=136 DIMY=92 nbit=16 -gdcmCxxTests testWrite Wrist.pap r +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite Wrist.pap r affim filein=Wrist.pap.RAW nbit=16 dimx=720 dimy=360 #Known as BUGGED ! #---------------- #Rectangular old 24 Bits image -gdcmCxxTests testWrite gdcm-RGB-LibIDORect.acr r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-RGB-LibIDORect.acr r; affim filein=gdcm-RGB-LibIDORect.acr.RAW DIMX=400 DIMY=100 nbit=24 #MR GE GENESIS_SIGNA Palo Alto -gdcmCxxTests testWrite DicomSampleNastyGEImage.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite DicomSampleNastyGEImage.dcm r; echo "WAS expected : wrong lenth (13) for 0008|103e" affim filein=DicomSampleNastyGEImage.dcm.RAW DIMX=256 DIMY=256 nbit=16 #MR Philips NTSCAN Hop. Neuro Lyon -gdcmCxxTests testWrite philipsMR-lossy.ima r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite philipsMR-lossy.ima r; echo "WAS expected : 'Bogus Huffman table definition' on philipsMR-lossy.ima" echo "IS expected : 'JERR_BAD_HUFF_TABLE sym 16 (>15)' but the show goes on" echo "breaks xmedcon" affim filein=philipsMR-lossy.ima.RAW dim=512 nbit=16 #CT Siemens Hop. Salengro Lille -gdcmCxxTests testWrite gdcm-JPEG-LossLess3a.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-JPEG-LossLess3a.dcm r; echo "expected : wrong sequence delimiter (b00c,0eb6) at end of pixels"; echo "xmedcon says 'error: Unexpected end of file'" affim filein=gdcm-JPEG-LossLess3a.dcm.RAW dim=512 nbit=16 vtkgdcmViewer gdcm-JPEG-LossLess3a.dcm #CR Philips Thoravision Hop Cardio Lyon -gdcmCxxTests testWrite gdcm-JPEG-LossLessThoravision.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-JPEG-LossLessThoravision.dcm r; echo "expected : 147 fragments,length : 29860 + 145*32760 + 14416" echo "breaks xmedcom, breaks e-film" echo "WAS expected : hashed image -with jLBJpeg-" @@ -333,12 +333,12 @@ echo "IS expected : Seg Fault" affim filein=gdcm-JPEG-LossLessThoravision.dcm.RAW DIMX=1876 DIMY=2076 nbit=16 #MR Picker ST. ANTHONY HOSPITAL -gdcmCxxTests testWrite MR.6799.1.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MR.6799.1.dcm r; echo "OK; DICOM Image with NO Preamble" affim filein=MR.6799.1.dcm.RAW dim=512 nbit=16 #Segmented Palette Color LUT Data -gdcmCxxTests testWrite gdcm-US-ALOKA-16.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite gdcm-US-ALOKA-16.dcm r; echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0" echo " PhotometricInterpretation=PALETTE COLOR" echo "expected : Gray image since 'Segmented xxx Palette Color LUT Data' not yet taken into account" @@ -349,15 +349,15 @@ vtkgdcmViewer gdcm-US-ALOKA-16.dcm affim dimx=640 dimy=480 filein=gdcm-US-ALOKA-16.dcm.RAW nbit=16 # bugged Siemens 'Leonardo' image -gdcmCxxTests testWrite 8078283Leonardo.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite 8078283Leonardo.dcm r; affim filein=8078283Leonardo.dcm.RAW dim=512 nbit=16 #CT McTwin Elscint C.H.R.U LILLE C.HURIEZ -gdcmCxxTests testWrite MxTwinLossLess.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite MxTwinLossLess.dcm r; affim filein=MxTwinLossLess.dcm.RAW DIMX=512 DIMY=512 nbit=16 # MRI image from VPRO burned CD -gdcmCxxTests testWrite mriThruVPRO.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite mriThruVPRO.dcm r; affim filein=mriThruVPRO.dcm.RAW DIMX=256 DIMY=256 nbit=16 echo "expected : tasteless SHIT !" echo "breaks Siemens Leonardo viewer . JPEG encoding is bugged?" @@ -365,5 +365,5 @@ echo "breaks Siemens Leonardo viewer . JPEG encoding is bugged?" # gdcm made Theralys image # due to H table, a SeQuence is tagged with 0 length # when using gdcmFile::WriteDcmXXX -gdcmCxxTests testWrite fromTheralys.dcm r; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests TestWrite fromTheralys.dcm r; affim filein=fromTheralys.dcm.RAW dim=256 nbit=16 diff --git a/checkSequences.sh b/checkSequences.sh index 979866c..52f88db 100644 --- a/checkSequences.sh +++ b/checkSequences.sh @@ -1,75 +1,80 @@ # use : -../../gdcm/bin/gdcmCxxTests PrintHeader mriThruVPRO.dcm 2 new | more +../../gdcm/bin/gdcmCxxTests PrintDocument mriThruVPRO.dcm 2 | more +Kross soucis ! + + # Horror Picture Show # ------------------- -gdcmCxxTests PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2 new # 400 SQ, embedded SQ +gdcmCxxTests PrintDocument gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2 # 400 SQ, embedded SQ # with O length sequ -gdcmCxxTests PrintHeader gdcm-MR-PHILIPS-16-NonRectPix.dcm 2 new # 22 SQ, embedded SQ +gdcmCxxTests PrintDocument gdcm-MR-PHILIPS-16-NonRectPix.dcm 2 # 22 SQ, embedded SQ # with O length sequ -gdcmCxxTests PrintHeader mriThruVPRO.dcm 2 new # 7 SQ ffffffff length +gdcmCxxTests PrintDocument mriThruVPRO.dcm 2 # 7 SQ ffffffff length # with O length sequ -gdcmCxxTests PrintHeader MxTwinLossLess.dcm 2 new # 0088|0200 x(59c) [Icon Image Sequence] +gdcmCxxTests PrintDocument MxTwinLossLess.dcm 2 # 0088|0200 x(59c) [Icon Image Sequence] # with O length sequ -gdcmCxxTests PrintHeader icone.dcm 2 new # SQ ffffffff length +gdcmCxxTests PrintDocument icone.dcm 2 # SQ ffffffff length # 0008|2112 x(264) [Source Image Sequence] # with 130 useless Items (?!) # 0088|0200 x(362a) [Icon Image Sequence] # with Item Delimitation Item e00d # with Sequence Delimitation Item e0dd -gdcmCxxTests PrintHeader Wrist.pap 2 new # PAPYRUS 3.0 image +gdcmCxxTests PrintDocument Wrist.pap 2 # PAPYRUS 3.0 image +gdcmCxxTests PrintDocument cinecard.pap 2 # PAPYRUS 3.0 multiframe + # Peacefull images # ---------------- -gdcmCxxTests PrintHeader canadaAloka.dcm 2 new # 0018|6011 x(2f6) [Sequence of Ultrasound Regions ] ffff +gdcmCxxTests PrintDocument canadaAloka.dcm 2 # 0018|6011 x(2f6) [Sequence of Ultrasound Regions ] ffff -gdcmCxxTests PrintHeader CLIP0001-Sequoia-U11.dcm # 0018|6011 [Sequence of Ultrasound Regions ] +gdcmCxxTests PrintDocument CLIP0001-Sequoia-U11.dcm # 0018|6011 [Sequence of Ultrasound Regions ] -gdcmCxxTests PrintHeader cr172241.dcm 2 new # 0028|3000 x(344) [Modality LUT Sequence] +gdcmCxxTests PrintDocument cr172241.dcm 2 # 0028|3000 x(344) [Modality LUT Sequence] -gdcmCxxTests PrintHeader fromTheralys.dcm 2 new # 0008|1140 x(2f1) [Referenced Image Sequence] +gdcmCxxTests PrintDocument fromTheralys.dcm 2 # 0008|1140 x(2f1) [Referenced Image Sequence] # ???? -gdcmCxxTests PrintHeader gdcm-CR-DCMTK-16-NonSamplePerPix.dcm 2 new # 0008|1140 x(39a) [Referenced Image Sequence] +gdcmCxxTests PrintDocument gdcm-CR-DCMTK-16-NonSamplePerPix.dcm 2 # 0008|1140 x(39a) [Referenced Image Sequence] # 0008|2112 x(440) [Source Image Sequence] -gdcmCxxTests PrintHeader gdcm-JPEG-Extended.dcm # ffff 0008|1140 x(39a) [Referenced Image Sequence] +gdcmCxxTests PrintDocument gdcm-JPEG-Extended.dcm # ffff 0008|1140 x(39a) [Referenced Image Sequence] # ffff 0008|2112 x(440) [Source Image Sequence] -gdcmCxxTests PrintHeader gdcm-JPEG-LossLess3a.dcm 2 new # 0008|2112 x(378) [Source Image Sequence] +gdcmCxxTests PrintDocument gdcm-JPEG-LossLess3a.dcm 2 # 0008|2112 x(378) [Source Image Sequence] -gdcmCxxTests PrintHeader gdcm-MR-PHILIPS-16.dcm 2 new # 0008|1140 x(33c) [Referenced Image Sequence] +gdcmCxxTests PrintDocument gdcm-MR-PHILIPS-16.dcm 2 # 0008|1140 x(33c) [Referenced Image Sequence] -gdcmCxxTests PrintHeader I9000001.dcm 2 new # ffff 0028|6100 x(c0e) [Mask Subtraction Sequence] +gdcmCxxTests PrintDocument I9000001.dcm 2 # ffff 0028|6100 x(c0e) [Mask Subtraction Sequence] # ffff 0050|0010 x(c74) [Device Sequence] -gdcmCxxTests PrintHeader multiframe2GE.dcm 2 new # 0028|6100 x(3e) [Mask Subtraction Sequence] +gdcmCxxTests PrintDocument multiframe2GE.dcm 2 # 0028|6100 x(3e) [Mask Subtraction Sequence] # 0050|0010 x(3c) [Device Sequence] -gdcmCxxTests PrintHeader irmPhlipsNew1.dcm 2 new # 0008|1140 x(33c) [Referenced Image Sequence] +gdcmCxxTests PrintDocument irmPhlipsNew1.dcm 2 # 0008|1140 x(33c) [Referenced Image Sequence] -gdcmCxxTests PrintHeader multiframe1Integris.dcm # 0028|3000 x(66c) [Modality LUT Sequence] +gdcmCxxTests PrintDocument multiframe1Integris.dcm # 0028|3000 x(66c) [Modality LUT Sequence] -gdcmCxxTests PrintHeader QMAG0001.dcm 2 new # 0008|2112 x(2ac) [Source Image Sequence] +gdcmCxxTests PrintDocument QMAG0001.dcm 2 # 0008|2112 x(2ac) [Source Image Sequence] # 0018|6011 x(3b6) [Sequence of Ultrasound Regions ] -gdcmCxxTests PrintHeader US.1.2.dcm 2 new # 0018|6011 x(4b8) [Sequence of Ultrasound Regions ] +gdcmCxxTests PrintDocument US.1.2.dcm 2 # 0018|6011 x(4b8) [Sequence of Ultrasound Regions ] -gdcmCxxTests PrintHeader sonataMonaco.dcm 2 new # 0008|1140 x(35a) [Referenced Image Sequence] +gdcmCxxTests PrintDocument sonataMonaco.dcm 2 # 0008|1140 x(35a) [Referenced Image Sequence] -gdcmCxxTests PrintHeader xa_integris.dcm 2 new # 0008|1111 x(32c) [Referenced Performed Procedure Step Sequence] +gdcmCxxTests PrintDocument xa_integris.dcm 2 # 0008|1111 x(32c) [Referenced Performed Procedure Step Sequence] # 0029|fd00 x(674) [unkn] -gdcmCxxTests PrintHeader E00001S03I0015.dcm 2 new # 0008|1111 x(342) [Referenced Performed Procedure Step Sequence] [] +gdcmCxxTests PrintDocument E00001S03I0015.dcm 2 # 0008|1111 x(342) [Referenced Performed Procedure Step Sequence] [] # 0008|1140 x(3ac) [Referenced Image Sequence] -gdcmCxxTests PrintHeader 3E768EB7.dcm 2 new +gdcmCxxTests PrintDocument 3E768EB7.dcm 2 diff --git a/checkWriteExplicit.sh b/checkWriteExplicit.sh index b602c4c..5a824ff 100644 --- a/checkWriteExplicit.sh +++ b/checkWriteExplicit.sh @@ -23,8 +23,8 @@ #No Swap Info #------------ -gdcmCxxTests testWrite mr176621.dcm x; -gdcmCxxTests PrintHeader mr176621.dcm.XDCM 2; . +/home/jpr/JUNK/gdcmbin/bin/Write mr176621.dcm x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument mr176621.dcm.XDCM 2; . vtkgdcmViewer mr176621.dcm.XDCM; # OK xmedcon mr176621.dcm.XDCM; # warning: No transfer syntax found # warning: Tag with uneven length @@ -40,98 +40,99 @@ xmedcon mr176621.dcm.XDCM; # warning: No transfer syntax found # ------------------------------------------- BIG SOUCY !! affimdcm filein=cr172241.dcm zoom=-4; xmedcon cr172241.dcm; # OK -gdcmCxxTests testWrite cr172241.dcm r; +/home/jpr/JUNK/gdcmbin/bin/Write cr172241.dcm r; affim filein=cr172241.dcm.RAW nbit=16 DIMX=1792 DIMY=2392; -gdcmCxxTests PrintHeader cr172241.dcm 2; #OK +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument cr172241.dcm 2; #OK # But ... : vtkgdcmViewer cr172241.dcm; # breaks (white image) WHITE IMAGE ?!? # Doesn't break DaVaW ... -gdcmCxxTests testWrite cr172241.dcm x; -gdcmCxxTests PrintHeader cr172241.dcm.XDCM 2; #OK +/home/jpr/JUNK/gdcmbin/bin/Write cr172241.dcm x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument cr172241.dcm.XDCM 2; #OK xmedcon cr172241.dcm.XDCM; # OK Incorrect OB value representation (fixed) affimdcm filein=cr172241.dcm.XDCM; # OK vtkgdcmViewer cr172241.dcm.XDCM; # breaks ?!? White image ! vtkgdcmViewer Wrist.pap; # PAPYRUS 3.0 single frame image -gdcmCxxTests PrintHeader Wrist.pap 2; -gdcmCxxTests testWrite Wrist.pap x; # OK -gdcmCxxTests PrintHeader Wrist.pap.XDCM +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument Wrist.pap 2; +/home/jpr/JUNK/gdcmbin/bin/Write Wrist.pap x; # OK +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument Wrist.pap.XDCM -gdcmCxxTests testWrite cr_45031.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write cr_45031.dcm x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument cr_45031.dcm.XDCM 2; vtkgdcmViewer cr_45031.dcm.XDCM; #OK xmedcon cr_45031.dcm.XDCM; #OK -gdcmCxxTests testWrite CR-MONO1-10-chest.dcm x; -gdcmCxxTests PrintHeader CR-MONO1-10-chest.dcm.XDCM 2; #OK +/home/jpr/JUNK/gdcmbin/bin/Write CR-MONO1-10-chest.dcm x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument CR-MONO1-10-chest.dcm.XDCM 2; #OK vtkgdcmViewer CR-MONO1-10-chest.dcm.XDCM; #OK xmedcon CR-MONO1-10-chest.dcm.XDCM; #OK Incorrect OB value representation (fixed) -gdcmCxxTests testWrite CT-MONO2-12-lomb-an2.acr2 x; -gdcmCxxTests PrintHeader CT-MONO2-12-lomb-an2.acr2.XDCM 2; # OK +/home/jpr/JUNK/gdcmbin/bin/Write CT-MONO2-12-lomb-an2.acr2 x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument CT-MONO2-12-lomb-an2.acr2.XDCM 2; # OK vtkgdcmViewer CT-MONO2-12-lomb-an2.acr2.XDCM; #OK xmedcon CT-MONO2-12-lomb-an2.acr2.XDCM; #OK Incorrect OB value representation (fixed) xmedcon gdcm-MR-SIEMENS-16.acr1; # Original OK -gdcmCxxTests PrintHeader gdcm-MR-SIEMENS-16.acr1; #OK -gdcmCxxTests testWrite gdcm-MR-SIEMENS-16.acr1 x; -gdcmCxxTests PrintHeader gdcm-MR-SIEMENS-16.acr1.XDCM 2; -vtkgdcmViewer gdcm-MR-SIEMENS-16.acr1.XDCM; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument gdcm-MR-SIEMENS-16-1.acr; #OK +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-MR-SIEMENS-16-1.acr x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument gdcm-MR-SIEMENS-16-1.acr.XDCM 2; +vtkgdcmViewer gdcm-MR-SIEMENS-16-1.acr.XDCM; xmedcon gdcm-MR-SIEMENS-16.acr1.XDCM; #breaks error: No images found xmedcon gdcm-MR-SIEMENS-16.acr2 #original OK -gdcmCxxTests testWrite gdcm-MR-SIEMENS-16.acr2 x; -gdcmCxxTests PrintHeader gdcm-MR-SIEMENS-16.acr2.XDCM 2; -vtkgdcmViewer gdcm-MR-SIEMENS-16.acr2.XDCM; #OK +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-MR-SIEMENS-16-2.acr x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument gdcm-MR-SIEMENS-16-2.acr.XDCM 2; +vtkgdcmViewer gdcm-MR-SIEMENS-16-2.acr.XDCM; #OK xmedcon gdcm-MR-SIEMENS-16.acr2.XDCM; #breaks # --> TODO fix group length for odd groups#Feb 03 18:50:24 log[4419]: warning: No transfer syntax found #Feb 03 18:50:24 log[4419]: warning: Tag with uneven length #Feb 03 18:50:24 log[4419]: error: No images found -gdcmCxxTests testWrite MR-MONO2-12-an2.acr2 x; -gdcmCxxTests PrintHeader newACR1000.nema.XDCM 2; +/home/jpr/JUNK/gdcmbin/bin/Write MR-MONO2-12-an2.acr2 x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument newACR1000.nema.XDCM 2; vtkgdcmViewer MR-MONO2-12-an2.acr2.XDCM; xmedcon MR-MONO2-12-an2.acr2.XDCM; # OK warning: Incorrect OB value representation -gdcmCxxTests testWrite newACR1000.nema x; # == gdcmMR-SIEMENS-16.acr2 -gdcmCxxTests PrintHeader newACR1000.nema.XDCM; #OK +/home/jpr/JUNK/gdcmbin/bin/Write newACR1000.nema x; # == gdcmMR-SIEMENS-16.acr2 +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument newACR1000.nema.XDCM; #OK vtkgdcmViewer newACR1000.nema.XDCM; #OK xmedcon newACR1000.nema.XDCM; # breaks : no image found -gdcmCxxTests testWrite oldACR00001.ima x; # == gdcm-MR-SIEMENS.16.acr1 -gdcmCxxTests PrintHeader oldACR00001.ima.XDCM; # OK +/home/jpr/JUNK/gdcmbin/bin/Write oldACR00001.ima x; # == gdcm-MR-SIEMENS.16.acr1 +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument oldACR00001.ima.XDCM; # OK vtkgdcmViewer oldACR00001.ima.XDCM; #OK xmedcon oldACR00001.ima.XDCM; # breaks : no image found -gdcmCxxTests testWrite OT-MONO2-8-a7.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write OT-MONO2-8-a7.dcm x; vtkgdcmViewer OT-MONO2-8-a7.dcm.XDCM; #OK xmedcon OT-MONO2-8-a7.dcm.XDCM ; #OK #No Samples Per Pixel #-------------------- -gdcmCxxTests testWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-CR-DCMTK-16-NonSamplePerPix.dcm x; affim filein=gdcm-CR-DCMTK-16-NonSamplePerPix.dcm; -gdcmCxxTests PrintHeader gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM 2; # OK +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM 2; # OK vtkgdcmViewer gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM; #OK xmedcon gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM #OK #Unnormalized Rectangular LibIDO format image #-------------------------------------------- -gdcmCxxTests testWrite gdcm-ACR-LibIDO.acr x; +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-ACR-LibIDO.acr x; vtkgdcmViewer gdcm-ACR-LibIDO.acr.XDCM; # OK xmedcon gdcm-ACR-LibIDO.acr.XDCM; #inverts x and y (of course) #Bits Allocated =12, Bits Stored=12 #---------------------------------- #MR Philips (once upon a time in Lyon-Sud) -gdcmCxxTests testWrite MR-MONO2-12-angio-an1.acr1 x; +/home/jpr/JUNK/gdcmbin/bin/Write MR-MONO2-12-angio-an1.acr1 x; vtkgdcmViewer MR-MONO2-12-angio-an1.acr1.XDCM; # shitty image xmedcon MR-MONO2-12-angio-an1.acr1.XDCM; # pas mieux : warning: Incorrect PixelData length #RGB #--- -gdcmCxxTests testWrite US.3405.1.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write US.3405.1.dcm x; echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0"; echo " PhotometricInterpretation=RGB"; vtkgdcmViewer US.3405.1.dcm.XDCM; #OK @@ -139,71 +140,71 @@ xmedcon US.3405.1.dcm.XDCM; #OK # ------------------------------------------- KING SIZE SOUCY !! -gdcmCxxTests testWrite OT-PAL-8-face.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write OT-PAL-8-face.dcm x; echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1"; echo " PhotometricInterpretation=PALETTE COLOR"; -gdcmCxxTests PrintHeaderOT-PAL-8-face.dcm.XDCM; OK +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocumentOT-PAL-8-face.dcm.XDCM; OK affimdcm filein=OT-PAL-8-face.dcm.XDCM; #OK vtkgdcmViewer OT-PAL-8-face.dcm.XDCM; # seg fault .!? xmedcon OT-PAL-8-face.dcm.XDCM; #OK -gdcmCxxTests testWrite 8BitsUncompressedColor.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write 8BitsUncompressedColor.dcm x; vtkgdcmViewer 8BitsUncompressedColor.dcm.XDCM; # seg fault .!? xmedcon 8BitsUncompressedColor.dcm.XDCM ; #OK # Implicit VR - Little Endian #----------------------------- -gdcmCxxTests testWrite CT-MONO2-16-ankle.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write CT-MONO2-16-ankle.dcm x; xmedcon CT-MONO2-16-ankle.dcm.XDCM; #ok vtkgdcmViewer CT-MONO2-16-ankle.dcm.XDCM; #ok - gdcmCxxTests PrintHeader CT-MONO2-16-ankle.dcm 2; #ok + /home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument CT-MONO2-16-ankle.dcm 2; #ok -gdcmCxxTests testWrite CT-MONO2-16-ort.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write CT-MONO2-16-ort.dcm x; vtkgdcmViewer CT-MONO2-16-ort.dcm.XDCM; #OK xmedcon CT-MONO2-16-ort.dcm.XDCM; #OK -gdcmCxxTests testWrite CT-MONO2-8-abdo.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write CT-MONO2-8-abdo.dcm x; vtkgdcmViewer CT-MONO2-8-abdo.dcm.XDCM; #OK xmedcon CT-MONO2-8-abdo.dcm.XDCM; #OK -gdcmCxxTests testWrite gdcm-MR-PHILIPS-16.dcm x; -gdcmCxxTests PrintHeader gdcm-MR-PHILIPS-16.dcm.XDCM 2; #OK +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-MR-PHILIPS-16.dcm x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument gdcm-MR-PHILIPS-16.dcm.XDCM 2; #OK vtkgdcmViewer gdcm-MR-PHILIPS-16.dcm.XDCM; # OK xmedcon gdcm-MR-PHILIPS-16.dcm.XDCM; # error: No images found xmedcon gdcm-MR-PHILIPS-16.dcm; # OK with original image -gdcmCxxTests testWrite MR-MONO2-16-head.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write MR-MONO2-16-head.dcm x; vtkgdcmViewer MR-MONO2-16-head.dcm.XDCM; #OK xmedcon MR-MONO2-16-head.dcm.XDCM; #OK -gdcmCxxTests testWrite multiframe1Integris.dcm x; -gdcmCxxTests PrintHeader CT-MONO2-8-abdo.dcm.XDCM 2; #OK +/home/jpr/JUNK/gdcmbin/bin/Write multiframe1Integris.dcm x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument CT-MONO2-8-abdo.dcm.XDCM 2; #OK vtkgdcmViewer multiframe1Integris.dcm.XDCM; #OK xmedcon multiframe1Integris.dcm.XDCM; #breaks No images found xmedcon multiframe1Integris.dcm; -gdcmCxxTests testWrite multiframe2GE.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write multiframe2GE.dcm x; vtkgdcmViewer multiframe2GE.dcm.XDCM; #OK #breaks xmedcon xmedcon multiframe2GE.dcm.XDCM; #breaks No images found vtkgdcmViewer irmPhlipsNew1.dcm; -gdcmCxxTests testWrite irmPhlipsNew1.dcm x; # == gdcm-MR-PHILIPS-16.dcm +/home/jpr/JUNK/gdcmbin/bin/Write irmPhlipsNew1.dcm x; # == gdcm-MR-PHILIPS-16.dcm vtkgdcmViewer irmPhlipsNew1.dcm.XDCM; #OK xmedcon irmPhlipsNew1.dcm.XDCM; #breaks : No images found #avec imagette (icone) vtkgdcmViewer icone.dcm; #OK -gdcmCxxTests PrintHeader icone.dcm 2 | grep fffe; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument icone.dcm 2 | grep fffe; echo "so many 0xfffe ! (274)" -gdcmCxxTests testWrite icone.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write icone.dcm x; xmedcon icone.dcm; #original image OK -gdcmCxxTests PrintHeader icone.dcm.XDCM 2; -#gdcmCxxTests PrintHeader OK; vtkgdcmViewer OK; breaks xmedcom +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument icone.dcm.XDCM 2; +#/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument OK; vtkgdcmViewer OK; breaks xmedcom vtkgdcmViewer icone.dcm.XDCM; # shitty image --> TODO : FIX (once again)icon pb xmedcon icone.dcm.XDCM; #breaks @@ -215,51 +216,51 @@ xmedcon icone.dcm.XDCM; #breaks #Explicit VR - Little Endian #---------------------------- -gdcmCxxTests testWrite CT-MONO2-16-brain.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write CT-MONO2-16-brain.dcm x; vtkgdcmViewer CT-MONO2-16-brain.dcm.XDCM; #OK xmedcon CT-MONO2-16-brain.dcm.XDCM; #OK -gdcmCxxTests PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2; xmedcon gdcm-MR-PHILIPS-16-Multi-Seq.dcm #OK :Skip PHILIPS premature item bug vtkgdcmViewer gdcm-MR-PHILIPS-16-Multi-Seq.dcm; #OK -gdcmCxxTests testWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm x; -gdcmCxxTests PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM 2; #pixel group missing??!? +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-MR-PHILIPS-16-Multi-Seq.dcm x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM 2; #pixel group missing??!? #vtkgdcmViewer gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM; #shitty image, ofcourse xmedcon gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM; # works ?!? vtkgdcmViewer gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM; -gdcmCxxTests testWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-MR-PHILIPS-16-NonRectPix.dcm x; vtkgdcmViewer gdcm-MR-PHILIPS-16-NonRectPix.dcm.XDCM; #OK xmedcon gdcm-MR-PHILIPS-16-NonRectPix.dcm.XDCM; #OK warning: Incorrect sequence length -gdcmCxxTests testWrite MR-MONO2-8-16x-heart.dcm x; #multiframe # equals to ??? +/home/jpr/JUNK/gdcmbin/bin/Write MR-MONO2-8-16x-heart.dcm x; #multiframe # equals to ??? vtkgdcmViewer MR-MONO2-8-16x-heart.dcm.XDCM; #OK xmedcon MR-MONO2-8-16x-heart.dcm.XDCM; #OK -gdcmCxxTests testWrite NM-MONO2-16-13x-heart.dcm x; #multiframe +/home/jpr/JUNK/gdcmbin/bin/Write NM-MONO2-16-13x-heart.dcm x; #multiframe vtkgdcmViewer NM-MONO2-16-13x-heart.dcm.XDCM; #OK xmedcon NM-MONO2-16-13x-heart.dcm.XDCM; #OK -gdcmCxxTests testWrite sonataMonaco.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write sonataMonaco.dcm x; vtkgdcmViewer sonataMonaco.dcm.XDCM; #OK xmedcon sonataMonaco.dcm.XDCM; #OK #MultiFrame -gdcmCxxTests testWrite US-MONO2-8-8x-execho.dcm x; -gdcmCxxTests PrintHeader US-MONO2-8-8x-execho.dcm.XDCM; +/home/jpr/JUNK/gdcmbin/bin/Write US-MONO2-8-8x-execho.dcm x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument US-MONO2-8-8x-execho.dcm.XDCM; vtkgdcmViewer US-MONO2-8-8x-execho.dcm.XDCM; # OK xmedcon US-MONO2-8-8x-execho.dcm.XDCM; #OK #RGB -gdcmCxxTests testWrite US-RGB-8-epicard.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write US-RGB-8-epicard.dcm x; echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1"; echo " PhotometricInterpretation=RGB"; vtkgdcmViewer US-RGB-8-epicard.dcm.XDCM; #OK xmedcon US-RGB-8-epicard.dcm.XDCM; #OK -gdcmCxxTests testWrite US-RGB-8-esopecho.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write US-RGB-8-esopecho.dcm x; echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0"; echo " PhotometricInterpretation=RGB", xmedcon US-RGB-8-esopecho.dcm.XDCM; #OK @@ -268,36 +269,36 @@ xmedcon US-RGB-8-esopecho.dcm.XDCM; #OK #-------------------------------------------------------------------------- # (JPEG Lossless) -gdcmCxxTests testWrite CT-MONO2-16-chest.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write CT-MONO2-16-chest.dcm x; vtkgdcmViewer CT-MONO2-16-chest.dcm.XDCM; #OK xmedcon CT-MONO2-16-chest.dcm.XDCM; #OK -gdcmCxxTests testWrite 012345.002.050.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write 012345.002.050.dcm x; vtkgdcmViewer 012345.002.050.dcm.XDCM; #OK xmedcon 012345.002.050.dcm.XDCM; #OK -gdcmCxxTests testWrite gdcm-JPEG-LossLess3a.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-JPEG-LossLess3a.dcm x; vtkgdcmViewer gdcm-JPEG-LossLess3a.dcm.XDCM ; #OK xmedcon gdcm-JPEG-LossLess3a.dcm.XDCM; #OK -gdcmCxxTests testWrite XA-MONO2-8-12x-catheter.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write XA-MONO2-8-12x-catheter.dcm x; vtkgdcmViewer XA-MONO2-8-12x-catheter.dcm.XDCM; #OK -gdcmCxxTests PrintHeader XA-MONO2-8-12x-catheter.dcm.XDCM 2; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument XA-MONO2-8-12x-catheter.dcm.XDCM 2; xmedcon XA-MONO2-8-12x-catheter.dcm.XDCM; #OK -gdcmCxxTests testWrite xa_integris.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write xa_integris.dcm x; echo "a lot of fragments expected here"; vtkgdcmViewer xa_integris.dcm.XDCM #OK xmedcon xa_integris.dcm.XDCM #OK -gdcmCxxTests testWrite 16BitsJpegLosslessGrayScale.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write 16BitsJpegLosslessGrayScale.dcm x; vtkgdcmViewer 16BitsJpegLosslessGrayScale.dcm.XDCM #OK xmedcon 16BitsJpegLosslessGrayScale.dcm.XDCM #OK #comming from GE dlx via VTServer vtkgdcmViewer I9000001.dcm; -gdcmCxxTests testWrite I9000001.dcm x; -gdcmCxxTests PrintHeader I9000001.dcm.XDCM 2; # pixel group NOT FOUND ??!?? +/home/jpr/JUNK/gdcmbin/bin/Write I9000001.dcm x; +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument I9000001.dcm.XDCM 2; # pixel group NOT FOUND ??!?? #black image vtkgdcmViewer I9000001.dcm.XDCM; #no image found @@ -305,30 +306,30 @@ xmedcon I9000001.dcm.XDCM; #JPEG Extended (Process 2 & 4) // 16 bits #----------------------------- -gdcmCxxTests testWrite gdcm-JPEG-Extended.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-JPEG-Extended.dcm x; vtkgdcmViewer gdcm-JPEG-Extended.dcm.XDCM; #OK xmedcon gdcm-JPEG-Extended.dcm.XDCM; #OK -gdcmCxxTests testWrite jpeglossy1.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write jpeglossy1.dcm x; vtkgdcmViewer jpeglossy1.dcm.XDCM #OK xmedcon jpeglossy1.dcm.XDCM #OK #JPEG Baseline (Process 14) #-------------------------- -gdcmCxxTests testWrite MR-MONO2-12-shoulder.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write MR-MONO2-12-shoulder.dcm x; vtkgdcmViewer MR-MONO2-12-shoulder.dcm.XDCM; #OK xmedcon MR-MONO2-12-shoulder.dcm.XDCM; #OK #fichier format ecat. -#gdcmCxxTests testWrite imageEcat.ecat r +#/home/jpr/JUNK/gdcmbin/bin/Write imageEcat.ecat r #JPEG Lossy 8 bits #================= #JPEG Baseline (Process 1) #------------------------- # Bracco Files -gdcmCxxTests testWrite US.1.2.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write US.1.2.dcm x; echo "expected : A lot of Fragments (40), nb Frames = 40 ;-)"; echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0"; echo " PhotometricInterpretation=YBR_FULL_422"; @@ -336,24 +337,24 @@ vtkgdcmViewer US.1.2.dcm.XDCM; #OK xmedcon US.1.2.dcm.XDCM; #OK #Sequoia Acusson U11 -gdcmCxxTests testWrite CLIP0001-Sequoia-U11.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write CLIP0001-Sequoia-U11.dcm x; vtkgdcmViewer CLIP0001-Sequoia-U11.dcm.XDCM; #OK xmedcon CLIP0001-Sequoia-U11.dcm.XDCM; #OK #RLE Lossless #------------- -gdcmCxxTests testWrite canadaAloka.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write canadaAloka.dcm x; echo "expected pixelType=8U SamplesPerPixel=1"; echo " PlanarConfiguration=0 PhotometricInterpretation=MONOCHROME2"; echo " nb Frames (DIMZ) : 1"; vtkgdcmViewer canadaAloka.dcm.XDCM; # OK xmedcon canadaAloka.dcm.XDCM; #OK -gdcmCxxTests testWrite jpeglossy1.dcm x; # equal to ??? +/home/jpr/JUNK/gdcmbin/bin/Write jpeglossy1.dcm x; # equal to ??? vtkgdcmViewer jpeglossy1.dcm.XDCM; #OK xmedcon jpeglossy1.dcm.XDCM; #OK -gdcmCxxTests testWrite FMAG0001.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write FMAG0001.dcm x; echo "expected pixelType=8U SamplesPerPixel=3"; echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL"; echo " nb Frames (DIMZ) : 1"; @@ -363,13 +364,13 @@ xmedcon FMAG0001.dcm.XDCM; #OK vtkgdcmViewer QMAG0001.dcm; #OK xmedcon QMAG0001.dcm; #original breaks xmedcon #warning: Unknown PhotometricInterpretation -gdcmCxxTests testWrite QMAG0001.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write QMAG0001.dcm x; echo "expected pixelType=8U SamplesPerPixel=3"; echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL"; vtkgdcmViewer QMAG0001.dcm.XDCM; #OK xmedcon QMAG0001.dcm.XDCM; #OK -gdcmCxxTests testWrite US-PAL-8-10x-echo.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write US-PAL-8-10x-echo.dcm x; echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0"; echo " PhotometricInterpretation=PALETTE COLOR"; echo " nb Frames (DIMZ): 10"; @@ -378,12 +379,12 @@ echo " Reading 10 'single fragment' Segments (ouf!)"; vtkgdcmViewer US-PAL-8-10x-echo.dcm.XDCM; # SEG FAULT xmedcon US-PAL-8-10x-echo.dcm.XDCM; #OK -gdcmCxxTests testWrite 8BitsRunLengthGrayScale.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write 8BitsRunLengthGrayScale.dcm x; echo "expected : correct Gray image"; vtkgdcmViewer 8BitsRunLengthGrayScale.dcm.XDCM; #OK xmedcon 8BitsRunLengthGrayScale.dcm.XDCM; #OK -gdcmCxxTests testWrite 8BitsRunLengthColor.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write 8BitsRunLengthColor.dcm x; echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=2"; echo " PhotometricInterpretation=PALETTE COLOR"; vtkgdcmViewer 8BitsRunLengthColor.dcm.XDCM; # SEG FAULT @@ -392,7 +393,7 @@ xmedcon 8BitsRunLengthColor.dcm.XDCM; #OK #RLE 16 bits --> Try to find some more images -gdcmCxxTests testWrite 16BitsRunLengthGrayScale.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write 16BitsRunLengthGrayScale.dcm x; echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0"; echo " PhotometricInterpretation=MONOCHROME2"; vtkgdcmViewer 16BitsRunLengthGrayScale.dcm.XDCM; @@ -402,12 +403,12 @@ xmedcon 16BitsRunLengthGrayScale.dcm.XDCM; #OK #-------------------------- #(break xmedcon) xmedcon 00191113.dcm; #No images found -gdcmCxxTests testWrite 00191113.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write 00191113.dcm x; vtkgdcmViewer 00191113.dcm.XDCM; #OK xmedcon 00191113.dcm.XDCM; #OK xmedcon DermaColorLossLess.dcm; #breaks xmedcon : No images found -gdcmCxxTests testWrite DermaColorLossLess.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write DermaColorLossLess.dcm x; xmedcon DermaColorLossLess.dcm.XDCM; #breaks xmedcon #Feb 02 19:33:16 log[2619]: warning: Tag with uneven length #Feb 02 19:33:16 log[2619]: warning: No transfer syntax found @@ -418,7 +419,7 @@ vtkgdcmViewer DermaColorLossLess.dcm.XDCM #OK affimdcm filein=RadBWLossLess.dcm; #OK vtkgdcmViewer RadBWLossLess.dcm; #OK xmedcon RadBWLossLess.dcm; # breaks :error: No images found -gdcmCxxTests testWrite RadBWLossLess.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write RadBWLossLess.dcm x; vtkgdcmViewer RadBWLossLess.dcm.XDCM; #OK xmedcon RadBWLossLess.dcm.XDCM; #error: No images found @@ -427,29 +428,29 @@ xmedcon RadBWLossLess.dcm.XDCM; #error: No images found #Rectangular old 24 Bits image vtkgdcmViewer gdcm-RGB-LibIDORect.acr; # OK -gdcmCxxTests testWrite gdcm-RGB-LibIDORect.acr x; +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-RGB-LibIDORect.acr x; vtkgdcmViewer gdcm-RGB-LibIDORect.acr.XDCM; xmedcon gdcm-RGB-LibIDORect.acr.XDCM; # breaks : large Bit Allocated (24) #TODO transform '24 bit images' into 8 bits + samples per pixel = 3 #MR GE GENESIS_SIGNA Palo Alto -gdcmCxxTests testWrite DicomSampleNastyGEImage.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write DicomSampleNastyGEImage.dcm x; echo " expected : warning uneven length (13) for 0008|103e"; vtkgdcmViewer DicomSampleNastyGEImage.dcm.XDCM; #OK xmedcon DicomSampleNastyGEImage.dcm.XDCM; #OK #MR Philips NTSCAN Hop. Neuro Lyon -gdcmCxxTests PrintHeader philipsMR-lossy.ima #OK +/home/jpr/JUNK/gdcmbin/bin/gdcmTests PrintDocument philipsMR-lossy.ima #OK xmedcon philipsMR-lossy.ima; #original breaks xmedcon vtkgdcmViewer philipsMR-lossy.ima; #Original OK -gdcmCxxTests testWrite philipsMR-lossy.ima x; +/home/jpr/JUNK/gdcmbin/bin/Write philipsMR-lossy.ima x; echo "WAS expected : 'Bogus Huffman table definition' on philipsMR-lossy.ima"; echo "IS expected : 'JERR_BAD_HUFF_TABLE sym 16 (>15)' but the show goes on"; vtkgdcmViewer philipsMR-lossy.ima.XDCM; # BLACK IMAGE xmedcon philipsMR-lossy.ima.XDCM; #OK #CT Siemens Hop. Salengro Lille -gdcmCxxTests testWrite gdcm-JPEG-LossLess3a.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-JPEG-LossLess3a.dcm x; echo "expected : wrong sequence delimiter (b00c,0eb6) at end of pixels"; echo "xmedcon says 'error: Unexpected end of file'"; vtkgdcmViewer gdcm-JPEG-LossLess3a.dcm.XDCM; #OK; needs 'R' for display @@ -458,7 +459,7 @@ xmedcon gdcm-JPEG-LossLess3a.dcm.XDCM; #OK #CR Philips Thoravision Hop Cardio Lyon affimdcm filein=gdcm-JPEG-LossLessThoravision.dcm; # OK, wrong image as usual xmedcon gdcm-JPEG-LossLessThoravision.dcm; #original seg faults xmedcon -gdcmCxxTests testWrite gdcm-JPEG-LossLessThoravision.dcm x; #breaks ; +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-JPEG-LossLessThoravision.dcm x; #breaks ; echo "expected : 147 fragments,length : 29860 + 145*32760 + 14416"; echo "breaks xmedcom, breaks e-film"; echo "WAS expected : hashed image -with jLBJpeg-"; @@ -466,7 +467,7 @@ echo "IS expected : Seg Fault"; xmedcon gdcm-JPEG-LossLessThoravision.dcm.XDCM; # NOT CHECKED #MR Picker ST. ANTHONY HOSPITAL -gdcmCxxTests testWrite MR.6799.1.dcm x; #equal to ??? +/home/jpr/JUNK/gdcmbin/bin/Write MR.6799.1.dcm x; #equal to ??? echo "OK; DICOM Image with NO Preamble"; vtkgdcmViewer MR.6799.1.dcm.XDCM; #OK xmedcon MR.6799.1.dcm.XDCM; #OK @@ -474,7 +475,7 @@ xmedcon MR.6799.1.dcm.XDCM; #OK #Segmented Palette Color LUT Data xmedcon gdcm-US-ALOKA-16.dcm; #breaks # Missing CLUT vtkgdcmViewer gdcm-US-ALOKA-16.dcm3; #OK -gdcmCxxTests testWrite gdcm-US-ALOKA-16.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write gdcm-US-ALOKA-16.dcm x; echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0"; echo " PhotometricInterpretation=PALETTE COLOR"; echo "expected : Gray image since 'Segmented xxx Palette Color LUT Data' not yet taken into account"; @@ -487,20 +488,20 @@ xmedcon gdcm-US-ALOKA-16.dcm.XDCM; #breaks #Feb 03 13:40:19 log[26999]: error: No images found # bugged Siemens 'Leonardo' image -gdcmCxxTests testWrite 8078283Leonardo.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write 8078283Leonardo.dcm x; xmedcon 8078283Leonardo.dcm.XDCM; #OK #CT McTwin Elscint C.H.R.U LILLE C.HURIEZ xmedcon MxTwinLossLess.dcm; #breaks No images found vtkgdcmViewer MxTwinLossLess.dcm; #OK - gdcmCxxTests testWrite MxTwinLossLess.dcm x; + /home/jpr/JUNK/gdcmbin/bin/Write MxTwinLossLess.dcm x; vtkgdcmViewer MxTwinLossLess.dcm.XDCM; #OK xmedcon MxTwinLossLess.dcm.XDCM #breaks # MRI image from VPRO burned CD vtkgdcmViewer mriThruVPRO.dcm; # Tasteless SHIT xmedcon mriThruVPRO.dcm; # pas mieux -gdcmCxxTests testWrite mriThruVPRO.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write mriThruVPRO.dcm x; vtkgdcmViewer mriThruVPRO.dcm.XDCM; echo "expected : tasteless SHIT !" echo "breaks Siemens Leonardo viewer . JPEG encoding is bugged?" @@ -509,6 +510,6 @@ echo "breaks Siemens Leonardo viewer . JPEG encoding is bugged?" # due to H table, a SeQuence is tagged with 0 length # when using gdcmFile::WriteDcmXXX xmedcon fromTheralys.dcm; # Original breaks xmedcon -gdcmCxxTests testWrite fromTheralys.dcm x; +/home/jpr/JUNK/gdcmbin/bin/Write fromTheralys.dcm x; vtkgdcmViewer fromTheralys.dcm.XDCM; # OK xmedcon fromTheralys.dcm.XDCM; # OK diff --git a/jpeglossles1.dcm b/jpeglossles1.dcm deleted file mode 100644 index 70680d1..0000000 Binary files a/jpeglossles1.dcm and /dev/null differ