From: Leonardo Florez-Valencia <florez-l@javeriana.edu.co>
Date: Fri, 1 Apr 2016 19:00:10 +0000 (-0500)
Subject: ...
X-Git-Tag: v0.1~213
X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=commitdiff_plain;h=31c007a5d5a410c96807cedc4efb2acda2489319;p=cpPlugins.git

...
---

diff --git a/lib/cpExtensions/Algorithms/ImageFunctionFilter.h b/lib/cpExtensions/Algorithms/ImageFunctionFilter.h
index 39007a5..731f0f5 100644
--- a/lib/cpExtensions/Algorithms/ImageFunctionFilter.h
+++ b/lib/cpExtensions/Algorithms/ImageFunctionFilter.h
@@ -6,9 +6,6 @@
 #define __CPEXTENSIONS__ALGORITHMS__IMAGEFUNCTIONFILTER__H__
 
 #include <itkImageToImageFilter.h>
-#include <itkImageScanlineConstIterator.h>
-#include <itkImageScanlineIterator.h>
-#include <itkProgressReporter.h>
 
 namespace cpExtensions
 {
@@ -16,73 +13,38 @@ namespace cpExtensions
   {
     /**
      */
-    template< class I, class O, class F >
+    template< class _TInput, class _TOutput, class _TFunction >
     class ImageFunctionFilter
-      : public itk::ImageToImageFilter< I, O >
+      : public itk::ImageToImageFilter< _TInput, _TOutput >
     {
     public:
-      typedef ImageFunctionFilter             Self;
-      typedef itk::ImageToImageFilter< I, O > Superclass;
-      typedef itk::SmartPointer< Self >       Pointer;
-      typedef itk::SmartPointer< const Self > ConstPointer;
+      typedef ImageFunctionFilter                          Self;
+      typedef itk::ImageToImageFilter< _TInput, _TOutput > Superclass;
+      typedef itk::SmartPointer< Self >                    Pointer;
+      typedef itk::SmartPointer< const Self >              ConstPointer;
 
-      typedef I TInputImage;
-      typedef O TOutputImage;
-      typedef F TFunction;
+      typedef _TInput    TInput;
+      typedef _TOutput   TOutput;
+      typedef _TFunction TFunction;
 
-      typedef typename O::RegionType TRegion;
+      typedef typename TOutput::RegionType TRegion;
 
     public:
       itkNewMacro( Self );
       itkTypeMacro( ImageFunctionFilter, itkImageToImageFilter );
 
-      itkGetObjectMacro( Function, F );
-      itkSetObjectMacro( Function, F );
+      itkGetObjectMacro( Function, TFunction );
+      itkSetObjectMacro( Function, TFunction );
 
     protected:
-      ImageFunctionFilter( )
-        : Superclass( )
-        {
-        }
-      virtual ~ImageFunctionFilter( )
-        {
-        }
+      ImageFunctionFilter( );
+      virtual ~ImageFunctionFilter( );
 
+      virtual void BeforeThreadedGenerateData( ) ITK_OVERRIDE;
       virtual void ThreadedGenerateData(
         const TRegion& region,
         itk::ThreadIdType threadId
-        )
-        {
-          const typename TRegion::SizeType& regionSize = region.GetSize( );
-          if( regionSize[ 0 ] == 0 )
-            return;
-          const I* in = this->GetInput( );
-          O* out = this->GetOutput( 0 );
-
-          const size_t nLines = region.GetNumberOfPixels( ) / regionSize[ 0 ];
-          itk::ProgressReporter progress( this, threadId, nLines );
-
-          // Define the iterators
-          itk::ImageScanlineConstIterator< I > inIt( in, region );
-          itk::ImageScanlineIterator< O > outIt( out, region );
-
-          inIt.GoToBegin( );
-          outIt.GoToBegin( );
-          while( !inIt.IsAtEnd( ) )
-          {
-            while( !inIt.IsAtEndOfLine( ) )
-            {
-              outIt.Set( this->m_Function->EvaluateAtIndex( inIt.GetIndex( ) ) );
-              ++inIt;
-              ++outIt;
-
-            } // elihw
-            inIt.NextLine( );
-            outIt.NextLine( );
-            progress.CompletedPixel( );
-
-          } // elihw
-        }
+        ) ITK_OVERRIDE;
 
     private:
       // Purposely not implemented.
@@ -90,7 +52,7 @@ namespace cpExtensions
       void operator=( const Self& );
 
     protected:
-      typename F::Pointer m_Function;
+      typename TFunction::Pointer m_Function;
     };
 
   } // ecapseman
@@ -98,7 +60,7 @@ namespace cpExtensions
 } // ecapseman
 
 #ifndef ITK_MANUAL_INSTANTIATION
-// TODO: #include <cpExtensions/Algorithms/ImageFunctionFilter.hxx>
+#include <cpExtensions/Algorithms/ImageFunctionFilter.hxx>
 #endif // ITK_MANUAL_INSTANTIATION
 
 #endif // __CPEXTENSIONS__ALGORITHMS__IMAGEFUNCTIONFILTER__H__
diff --git a/lib/cpExtensions/Algorithms/ImageFunctionFilter.hxx b/lib/cpExtensions/Algorithms/ImageFunctionFilter.hxx
new file mode 100644
index 0000000..c96c092
--- /dev/null
+++ b/lib/cpExtensions/Algorithms/ImageFunctionFilter.hxx
@@ -0,0 +1,67 @@
+// -------------------------------------------------------------------------
+// @author Leonardo Florez-Valencia (florez-l@javeriana.edu.co)
+// -------------------------------------------------------------------------
+
+#ifndef __CPEXTENSIONS__ALGORITHMS__IMAGEFUNCTIONFILTER__HXX__
+#define __CPEXTENSIONS__ALGORITHMS__IMAGEFUNCTIONFILTER__HXX__
+
+#include <itkMacro.h>
+#include <itkImageRegionConstIteratorWithIndex.h>
+#include <itkImageRegionIteratorWithIndex.h>
+#include <itkProgressReporter.h>
+
+// -------------------------------------------------------------------------
+template< class _TInput, class _TOutput, class _TFilter >
+cpExtensions::Algorithms::ImageFunctionFilter< _TInput, _TOutput, _TFilter >::
+ImageFunctionFilter( )
+  : Superclass( )
+{
+}
+
+// -------------------------------------------------------------------------
+template< class _TInput, class _TOutput, class _TFilter >
+cpExtensions::Algorithms::ImageFunctionFilter< _TInput, _TOutput, _TFilter >::
+~ImageFunctionFilter( )
+{
+}
+
+// -------------------------------------------------------------------------
+template< class _TInput, class _TOutput, class _TFilter >
+void cpExtensions::Algorithms::ImageFunctionFilter< _TInput, _TOutput, _TFilter >::
+BeforeThreadedGenerateData( )
+{
+  if( this->m_Function.IsNull( ) )
+    itkExceptionMacro( << "Please set a valid itk::ImageFunction" );
+  this->m_Function->SetInputImage( this->GetInput( ) );
+}
+
+// -------------------------------------------------------------------------
+template< class _TInput, class _TOutput, class _TFilter >
+void cpExtensions::Algorithms::ImageFunctionFilter< _TInput, _TOutput, _TFilter >::
+ThreadedGenerateData( const TRegion& region, itk::ThreadIdType threadId )
+{
+  const typename TRegion::SizeType& regionSize = region.GetSize( );
+  if( regionSize[ 0 ] == 0 )
+    return;
+  const _TInput* in = this->GetInput( );
+  _TOutput* out = this->GetOutput( 0 );
+
+  itk::ProgressReporter pr( this, threadId, region.GetNumberOfPixels( ) );
+
+  // Define the iterators
+  itk::ImageRegionConstIteratorWithIndex< TInput > iIt( in, region );
+  itk::ImageRegionIteratorWithIndex< TOutput > oIt( out, region );
+
+  iIt.GoToBegin( );
+  oIt.GoToBegin( );
+  for( ; !iIt.IsAtEnd( ) && !oIt.IsAtEnd( ); ++iIt, ++oIt )
+  {
+    oIt.Set( this->m_Function->EvaluateAtIndex( iIt.GetIndex( ) ) );
+    pr.CompletedPixel( );
+
+  } // rof
+}
+
+#endif // __CPEXTENSIONS__ALGORITHMS__IMAGEFUNCTIONFILTER__HXX__
+
+// eof - $RCSfile$