From: dsarrut Date: Thu, 11 Feb 2010 12:29:21 +0000 (+0000) Subject: ggo correction X-Git-Tag: v1.2.0~811 X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=commitdiff_plain;h=b813adf97551bade7df572a1dbcd59f08b972f68;p=clitk.git ggo correction --- diff --git a/tools/clitkAffineTransform.ggo b/tools/clitkAffineTransform.ggo index ac8c2d0..ba03536 100644 --- a/tools/clitkAffineTransform.ggo +++ b/tools/clitkAffineTransform.ggo @@ -1,5 +1,5 @@ #File clitkAffineTransform.ggo -Package "clitkAffineTransform" +package "clitkAffineTransform" version "1.0" purpose "Resample with or without affine transform of 2D, 3D, 4D images or vector fields" diff --git a/tools/clitkAverageTemporalDimension.ggo b/tools/clitkAverageTemporalDimension.ggo index f8b3342..1e2d917 100644 --- a/tools/clitkAverageTemporalDimension.ggo +++ b/tools/clitkAverageTemporalDimension.ggo @@ -1,5 +1,5 @@ #File clitkAverageTemporalDimension.ggo -Package "clitkAverageTemporalDimension" +package "clitkAverageTemporalDimension" version "1.0" purpose "Average the last dimension to an (n-1)D image. Input is either nD or multiple (n-1)D image or DVF" diff --git a/tools/clitkDicomInfo.ggo b/tools/clitkDicomInfo.ggo index 02351ea..27786a4 100644 --- a/tools/clitkDicomInfo.ggo +++ b/tools/clitkDicomInfo.ggo @@ -1,5 +1,5 @@ # file DicomInfos.ggo -Package "clitk" +package "clitk" version "read and print Dicom header" option "config" - "Config file" string no diff --git a/tools/clitkGuerreroVentilation.ggo b/tools/clitkGuerreroVentilation.ggo index 26a4ff8..9dfdbda 100644 --- a/tools/clitkGuerreroVentilation.ggo +++ b/tools/clitkGuerreroVentilation.ggo @@ -1,5 +1,5 @@ #File clitkGuerreroVentilation.ggo -Package "clitkGuerreroVentilation" +package "clitkGuerreroVentilation" version "1.0" purpose "Compute the ventilation image from a motion compensated image and the reference (end-expiration) image" diff --git a/tools/clitkImageArithm.ggo b/tools/clitkImageArithm.ggo index d3d5ef6..69a7aba 100644 --- a/tools/clitkImageArithm.ggo +++ b/tools/clitkImageArithm.ggo @@ -1,5 +1,5 @@ #File clitkImageArithm.ggo -Package "clitkImageArithm" +package "clitkImageArithm" version "1.0" purpose "Perform an arithmetic operation (+-*/ ...) using two images or using an image and a scalar value." diff --git a/tools/clitkImageConvert.ggo b/tools/clitkImageConvert.ggo index e3c7507..22e3291 100644 --- a/tools/clitkImageConvert.ggo +++ b/tools/clitkImageConvert.ggo @@ -1,5 +1,5 @@ # file clitkImageConvert.ggo -Package "clitkImageConvert" +package "clitkImageConvert" version "1.0" purpose "Convert an image into another image.\n\tAllow to change the file format and/or the pixel type. \n\tKnown file formats 2D: jpeg png bmp tif mhd hdr vox dcm \n\tKnown file formats 3D: mhd vox hdr dcm\n\tKnown file formats 4D: mhd \n\tKnown images: 2D 3D or 4D, schar, uchar, short, ushort, int, float and double \nYou can also specify multiple inputs (i.e. \"-i a.mhd,b.mhd,c.mhd\" or \"a.mhd b.mhd ...\" without the '-i' option) having the same size and dimension to build a (n+1)D image." diff --git a/tools/clitkImageCreate.ggo b/tools/clitkImageCreate.ggo index 6ba482c..f197de7 100644 --- a/tools/clitkImageCreate.ggo +++ b/tools/clitkImageCreate.ggo @@ -1,5 +1,5 @@ #File clitkImageCreate.ggo -Package "clitkImageCreate" +package "clitkImageCreate" version "1.0" purpose "Create a new singled value filled image (pixeltype is float, use clitkImageConvert to change)." diff --git a/tools/clitkImageExtractLine.ggo b/tools/clitkImageExtractLine.ggo index 917c7aa..988c0f5 100644 --- a/tools/clitkImageExtractLine.ggo +++ b/tools/clitkImageExtractLine.ggo @@ -1,5 +1,5 @@ #File clitkImageExtractLine.ggo -Package "clitkImageExtractLine" +package "clitkImageExtractLine" version "1.0" purpose "Extract 1D values along a line (in voxels). 3D only." diff --git a/tools/clitkImageFillRegion.ggo b/tools/clitkImageFillRegion.ggo index ebde2b9..e0baa88 100644 --- a/tools/clitkImageFillRegion.ggo +++ b/tools/clitkImageFillRegion.ggo @@ -1,5 +1,5 @@ #File clitkImageFillRegion.ggo -Package "clitkImageFillRegion" +package "clitkImageFillRegion" version "1.0" purpose "Fill a region (rectangular or ellipsoide) with a value inside an image." diff --git a/tools/clitkImageInfo.ggo b/tools/clitkImageInfo.ggo index 0c058fa..53bdc05 100644 --- a/tools/clitkImageInfo.ggo +++ b/tools/clitkImageInfo.ggo @@ -1,5 +1,5 @@ # file clitkImageInfo.ggo -Package "clitkImageInfo" +package "clitkImageInfo" version "1.0" purpose "Display information on images." diff --git a/tools/clitkImageResample.ggo b/tools/clitkImageResample.ggo index 5d9dde5..b36e394 100644 --- a/tools/clitkImageResample.ggo +++ b/tools/clitkImageResample.ggo @@ -1,5 +1,5 @@ #File clitkImageResample.ggo -Package "clitkImageResample" +package "clitkImageResample" version "1.0" purpose "Resample an image. You can specify the interpolation, you can apply a Gaussian filter before." @@ -12,6 +12,6 @@ option "order" b "BSpline ordre (range 0-5)" int no default="3" option "sampling" s "BLUT sampling value" int no default="30" option "size" - "Number of pixels of each coordonate" int no multiple default="0" option "spacing" - "Spacing in mm between pixels" float no multiple default="0.0" -option "gauss" g "Apply Gaussian before (sigma in mm)" float no multiple default="1.0" +option "gauss" g "Apply Gaussian before (sigma in mm) ; no Gaussian if not given" float no multiple default="1.0" option "default" d "Default pixel value" float no default = "0.0" diff --git a/tools/clitkInvertVF.ggo b/tools/clitkInvertVF.ggo index da3ca8b..54c1e21 100644 --- a/tools/clitkInvertVF.ggo +++ b/tools/clitkInvertVF.ggo @@ -2,8 +2,8 @@ #Author: Jef Vandemeulebroucke #Date : Tue 15 June 16.35 -Package "clitk" -Version "Read a DVF and invert it using a linear splat to the target, or by subsumpling the input grid and matching it to the output grid" +package "clitk" +version "Read a DVF and invert it using a linear splat to the target, or by subsumpling the input grid and matching it to the output grid" option "config" - "Config file" string no option "verbose" v "Verbose" flag off diff --git a/tools/clitkSetBackground.ggo b/tools/clitkSetBackground.ggo index c69413b..26d4d38 100644 --- a/tools/clitkSetBackground.ggo +++ b/tools/clitkSetBackground.ggo @@ -1,5 +1,5 @@ #File clitkSetBackground.ggo -Package "clitkSetBackground" +package "clitkSetBackground" version "1.0" purpose "" diff --git a/tools/clitkSignalFilter.ggo b/tools/clitkSignalFilter.ggo index 5067fcd..de47d83 100644 --- a/tools/clitkSignalFilter.ggo +++ b/tools/clitkSignalFilter.ggo @@ -1,6 +1,6 @@ #File clitkSignalFilter.ggo -Package "clitk" -Version "Pass an filter on an signal" +package "clitk" +version "Pass an filter on an signal" option "config" - "Config file" string no option "verbose" v "Verbose" flag off diff --git a/tools/clitkSignalMeanPositionTracking.ggo b/tools/clitkSignalMeanPositionTracking.ggo index a1a7939..b3cb8e3 100644 --- a/tools/clitkSignalMeanPositionTracking.ggo +++ b/tools/clitkSignalMeanPositionTracking.ggo @@ -1,5 +1,5 @@ #File clitkSignalMeanPositionTracking.ggo -Package "clitkSignalMeanPositionTracking" +package "clitkSignalMeanPositionTracking" version "1.0" purpose "See Ruan 2008, compute mean position from a signal" diff --git a/tools/clitkSplitImage.ggo b/tools/clitkSplitImage.ggo index 03d77d8..b68eddf 100644 --- a/tools/clitkSplitImage.ggo +++ b/tools/clitkSplitImage.ggo @@ -1,5 +1,5 @@ #File clitkSplitImage.ggo -Package "clitkSplitImage" +package "clitkSplitImage" version "1.0" purpose "Split an image into n images along a dimension" diff --git a/tools/clitkVFMerge.ggo b/tools/clitkVFMerge.ggo index 0b073c7..2e425d8 100644 --- a/tools/clitkVFMerge.ggo +++ b/tools/clitkVFMerge.ggo @@ -2,8 +2,8 @@ #Author: Jef Vandemeulebroucke #Date : Tue 15 June 16.35 -Package "clitk" -Version "Read a bunch of vector fields (.mhd, .vf, ..) and turn them into a higher dimension vector field (.mhd, ...)" +package "clitk" +version "Read a bunch of vector fields (.mhd, .vf, ..) and turn them into a higher dimension vector field (.mhd, ...)" option "config" - "Config file" string no option "output" o "Output VF filename" string yes diff --git a/tools/clitkWarpImage.ggo b/tools/clitkWarpImage.ggo index 596c0aa..8a572c4 100644 --- a/tools/clitkWarpImage.ggo +++ b/tools/clitkWarpImage.ggo @@ -1,5 +1,5 @@ #File clitkWarpImage.ggo -Package "clitkWarpImage" +package "clitkWarpImage" version "1.0" purpose "Warp an image. Output will have the extent (origin+ spacing*size) of the input." diff --git a/tools/clitkWriteDicomSeries.ggo b/tools/clitkWriteDicomSeries.ggo index 7885274..edf4de4 100644 --- a/tools/clitkWriteDicomSeries.ggo +++ b/tools/clitkWriteDicomSeries.ggo @@ -1,5 +1,5 @@ #File clitkWriteDicomSeries.ggo -Package "clitkWriteDicomSeries" +package "clitkWriteDicomSeries" version "1.0" purpose "" diff --git a/tools/clitkZeroVF.ggo b/tools/clitkZeroVF.ggo index 82c941f..f314858 100644 --- a/tools/clitkZeroVF.ggo +++ b/tools/clitkZeroVF.ggo @@ -2,8 +2,8 @@ #Author: Joel Schaerer ##Date : Tue 15 March 16.35 -Package "clitk" -Version "Read a vector fields (.mhd, .vf, ..) and zero it" +package "clitk" +version "Read a vector fields (.mhd, .vf, ..) and zero it" option "config" - "Config file" string no option "input" i "Input VF filename" string yes