From: Eduardo DAVILA <eduardo.davila@creatis.insa-lyon.fr>
Date: Thu, 12 Nov 2020 10:06:53 +0000 (+0100)
Subject: mhdb
X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?a=commitdiff_plain;h=d285b5ec732ee1bd21d54dcc545eb8b2ab232617;p=bbtk.git

mhdb
---

diff --git a/packages/vtk/src/bbvtkMetaImageWriter.cxx b/packages/vtk/src/bbvtkMetaImageWriter.cxx
index 7478b1d..ee36755 100644
--- a/packages/vtk/src/bbvtkMetaImageWriter.cxx
+++ b/packages/vtk/src/bbvtkMetaImageWriter.cxx
@@ -7,6 +7,13 @@
 #include <vtkExtractVOI.h> 
 #include <vtkMetaImageWriter.h> 
 
+#include "vtkJSONImageWriter.h"
+#include "vtkXMLImageDataWriter.h"
+#include "vtkXMLDataSetWriter.h"
+#include "vtkDataSetWriter.h"
+#include "vtkPDataSetWriter.h"
+#include "vtkXMLWriter.h"
+
 namespace bbvtk
 {
 
@@ -31,17 +38,18 @@ void MetaImageWriter::Save_mhdb( std::string filename  , vtkImageData* img ,int
 	int bsz=ceil((double)dim[2]/(double)sizeB);
 	int voi[6];
 	std::string filenameBlock;	
+	std::string filenameBlockVti;	
 	if (filename.substr(filename.size()-5) == ".mhdb")  
 	{ 
 		std::string cmd;
-		cmd="rm -rf "+filename;
+//		cmd="rm -rf "+filename;
 		system( cmd.c_str() );
 		cmd="mkdir "+filename;
 		system( cmd.c_str() );
 	} 
 	
 	std::string fileinfoname=filename+"/info.dat";
-	FILE *ff=fopen(fileinfoname.c_str(),"r");
+	FILE *ff=fopen(fileinfoname.c_str(),"w");
   	  fprintf(ff,"SizeBlock = %d\n",sizeB);
   	  fprintf(ff,"DimSize = %d %d %d\n" , dim[0],dim[1],dim[2] );
   	  fprintf(ff,"ElementType = %d\n", elementType );
@@ -68,14 +76,25 @@ void MetaImageWriter::Save_mhdb( std::string filename  , vtkImageData* img ,int
 				extract->UpdateWholeExtent();
 				extract->Modified();
 				extract->Update();
+				filenameBlock		=filename+"/mhdb-"+ std::to_string(i)+"-"+ std::to_string(j)+"-"+ std::to_string(k)+".mha";
 			   	vtkMetaImageWriter* w = vtkMetaImageWriter::New();
 				w->SetInputData( extract->GetOutput() );
 				w->SetCompression(true);  
 				w->SetFileDimensionality(bbGetInputIn()->GetDataDimension()); 	// NTU
-				filenameBlock=filename+"/mhdb-"+ std::to_string(i)+"-"+ std::to_string(j)+"-"+ std::to_string(k)+".mhd";
 				w->SetFileName( filenameBlock.c_str() );  
 				w->Write();
 				w->Delete();
+				
+				filenameBlockVti=filenameBlock+"-ZLib.vti";
+				vtkXMLImageDataWriter *writer = vtkXMLImageDataWriter::New();
+				writer->SetDataModeToBinary();
+				writer->SetCompressionLevel(5);
+				writer->SetCompressorTypeToZLib();
+				writer->SetFileName( filenameBlockVti.c_str() );
+ 				writer->SetInputData( bbGetInputIn() );
+				writer->Write();
+
+				
 				extract->Delete();
 			} // for k
 		} // for j