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Creatis software - clitk.git/log
David Sarrut [Mon, 26 Nov 2012 06:46:09 +0000 (07:46 +0100)]
SliceBySlice filter for uchar
David Sarrut [Mon, 26 Nov 2012 06:45:18 +0000 (07:45 +0100)]
Try to precompile segmentation filter with uchar (faster compil)
David Sarrut [Tue, 6 Nov 2012 09:32:24 +0000 (10:32 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Tue, 6 Nov 2012 09:23:38 +0000 (10:23 +0100)]
Add option to detect too small segmented structures
David Sarrut [Tue, 6 Nov 2012 09:22:53 +0000 (10:22 +0100)]
Add option to detect too small segmented structures
Romulo Pinho [Mon, 5 Nov 2012 16:44:14 +0000 (17:44 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Mon, 5 Nov 2012 16:42:12 +0000 (17:42 +0100)]
correctly reading contour colours for GDCM 2.x
Romulo Pinho [Mon, 5 Nov 2012 09:18:57 +0000 (10:18 +0100)]
adjusting dependencies
David Sarrut [Fri, 2 Nov 2012 19:35:17 +0000 (12:35 -0700)]
Sorry I push the wrong file
David Sarrut [Fri, 2 Nov 2012 19:25:11 +0000 (12:25 -0700)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Conflicts:
vv/vvMainWindow.cxx
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add nii.gz as file extension
Benoît Presles [Tue, 30 Oct 2012 10:57:16 +0000 (11:57 +0100)]
Added svl file format (Clarity)
Benoît Presles [Tue, 30 Oct 2012 10:53:35 +0000 (11:53 +0100)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Simon Rit [Tue, 30 Oct 2012 10:50:05 +0000 (11:50 +0100)]
Fixed slice error: check that it is in extent before updating extents
David Sarrut [Mon, 29 Oct 2012 15:45:31 +0000 (16:45 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Thu, 25 Oct 2012 10:03:21 +0000 (12:03 +0200)]
bug removal
- correcting iterator regions
Romulo Pinho [Wed, 24 Oct 2012 20:50:13 +0000 (22:50 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Wed, 24 Oct 2012 20:49:22 +0000 (22:49 +0200)]
bug removal
- was accessing pixel neighbours outside the image buffer...
Benoît Presles [Wed, 24 Oct 2012 11:20:16 +0000 (13:20 +0200)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Benoît Presles [Wed, 24 Oct 2012 11:18:32 +0000 (13:18 +0200)]
updated the render window for the labeled landmarks
Simon Rit [Wed, 24 Oct 2012 07:08:23 +0000 (09:08 +0200)]
No typename outside template (MSVC sensitive)
Benoît Presles [Tue, 23 Oct 2012 17:40:55 +0000 (19:40 +0200)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Benoît Presles [Tue, 23 Oct 2012 17:02:58 +0000 (19:02 +0200)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Benoît Presles [Tue, 23 Oct 2012 17:01:59 +0000 (19:01 +0200)]
added labels to landmarks
Simon Rit [Tue, 23 Oct 2012 16:56:26 +0000 (18:56 +0200)]
Clean-up while debugging
Romulo Pinho [Tue, 23 Oct 2012 09:51:00 +0000 (11:51 +0200)]
further changes to solve bug #1714
David Sarrut [Mon, 22 Oct 2012 13:29:26 +0000 (15:29 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Mon, 22 Oct 2012 13:27:26 +0000 (15:27 +0200)]
Fix for Bug #1714: only check on sliders of the visible vvSlicer.
Romulo Pinho [Fri, 19 Oct 2012 09:52:27 +0000 (11:52 +0200)]
VV: added links to Read/Save state
David Sarrut [Fri, 19 Oct 2012 07:41:26 +0000 (09:41 +0200)]
Change comment for buggy part
David Sarrut [Fri, 19 Oct 2012 07:40:05 +0000 (09:40 +0200)]
Default opacity is now 0.5
David Sarrut [Fri, 19 Oct 2012 07:39:40 +0000 (09:39 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Thu, 18 Oct 2012 08:07:56 +0000 (10:07 +0200)]
vv: corrected tree column updates when maximizing view
David Sarrut [Thu, 18 Oct 2012 07:57:48 +0000 (09:57 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Thu, 18 Oct 2012 07:37:37 +0000 (09:37 +0200)]
VV panning: middlebutton = left button + shift
- a change made specially for mac owners and their mice-without-middle-button issues... ;-)
Romulo Pinho [Thu, 18 Oct 2012 07:07:30 +0000 (09:07 +0200)]
updated help message concerning window/level cmd line option
David Sarrut [Wed, 17 Oct 2012 10:55:39 +0000 (12:55 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Conflicts:
vv/vv.cxx
vv/vvSlicerManager.cxx
vv/vvSlicerManagerCommand.cxx
David Sarrut [Wed, 17 Oct 2012 10:48:34 +0000 (12:48 +0200)]
Add option to detect too small CCL (stomach)
Romulo Pinho [Wed, 17 Oct 2012 10:41:40 +0000 (12:41 +0200)]
window/level in read/save state
Romulo Pinho [Wed, 17 Oct 2012 09:39:56 +0000 (11:39 +0200)]
accepts multiple window/level in cmd-line
- window/level is applied to set of images (sequences too) appearing before the window/level
- useful when opening, eg, different modalities at the same time
Romulo Pinho [Tue, 16 Oct 2012 21:18:37 +0000 (23:18 +0200)]
preserve crosshair position when changing orientation
- it used to jump to the slice in the middle of the volume
Romulo Pinho [Tue, 16 Oct 2012 14:40:04 +0000 (16:40 +0200)]
maximizes the selected slicer
- before it was just the NW one.
Romulo Pinho [Mon, 15 Oct 2012 08:44:25 +0000 (10:44 +0200)]
gdcm 1.X compatibility
Simon Rit [Wed, 10 Oct 2012 08:26:39 +0000 (10:26 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Conflicts:
vv/vv.cxx
Simon Rit [Wed, 3 Oct 2012 08:16:16 +0000 (10:16 +0200)]
Fix for MSVC CPack
Simon Rit [Mon, 1 Oct 2012 14:56:38 +0000 (16:56 +0200)]
Various fixes
Simon Rit [Mon, 1 Oct 2012 14:52:21 +0000 (16:52 +0200)]
Updated version for new release
Simon Rit [Mon, 1 Oct 2012 14:44:05 +0000 (16:44 +0200)]
Fix for old versions of gcc
Romulo Pinho [Mon, 1 Oct 2012 13:19:16 +0000 (15:19 +0200)]
corrections post- "-h" addition in VV
Romulo Pinho [Mon, 1 Oct 2012 08:35:37 +0000 (10:35 +0200)]
added "-h" for help option VV
Simon Rit [Fri, 28 Sep 2012 13:04:34 +0000 (15:04 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Fri, 28 Sep 2012 13:03:17 +0000 (15:03 +0200)]
Sync gengetopt cmake files with rtk
dbcache [Fri, 28 Sep 2012 11:27:26 +0000 (13:27 +0200)]
use of relative path for default study/series description
Romulo Pinho [Fri, 28 Sep 2012 09:57:47 +0000 (11:57 +0200)]
error in dicom key setting...
Romulo Pinho [Thu, 27 Sep 2012 15:47:59 +0000 (17:47 +0200)]
default values for study's/series' ID, time, date, number, description
dbcache [Thu, 27 Sep 2012 14:55:43 +0000 (16:55 +0200)]
GDCM 1.x compatibility
Romulo Pinho [Thu, 27 Sep 2012 14:10:23 +0000 (16:10 +0200)]
newStudyUID forces newSeriesUID
- also some bug corrections...
dbcache [Thu, 27 Sep 2012 13:17:45 +0000 (15:17 +0200)]
corrections...
dbcache [Thu, 27 Sep 2012 12:43:42 +0000 (14:43 +0200)]
GDCM 1.x compatibility
Romulo Pinho [Thu, 27 Sep 2012 12:41:45 +0000 (14:41 +0200)]
create new files for new dicom study/series
Romulo Pinho [Tue, 25 Sep 2012 16:07:20 +0000 (18:07 +0200)]
auto generate dicom file UIDs when new series/study is specified
Romulo Pinho [Tue, 25 Sep 2012 10:04:40 +0000 (12:04 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Tue, 25 Sep 2012 10:03:53 +0000 (12:03 +0200)]
gdcm 1.x compatibility
Simon Rit [Mon, 24 Sep 2012 13:20:30 +0000 (15:20 +0200)]
First version of the superbuild CMakeLists.txt.
Romulo Pinho [Fri, 21 Sep 2012 15:46:20 +0000 (17:46 +0200)]
new options to auto-generate dcm series UIDs
David Sarrut [Wed, 19 Sep 2012 07:01:20 +0000 (09:01 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Tue, 18 Sep 2012 08:33:57 +0000 (10:33 +0200)]
Lungs window/level is now the same as in FOCAL
- (1700,-300)
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
small cout bug (cast bg to int instead of char)
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Cosmetic
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Cosmetic
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Replace floor by rint to correct link error in vv
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add -h option
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Correct bug when the user cancel the color selection
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Set the contour to the same color than the overlay.
Correct bug when the user cancel the color selection.
David Sarrut [Wed, 12 Sep 2012 13:32:08 +0000 (15:32 +0200)]
Remove unused files
Simon Rit [Thu, 6 Sep 2012 10:09:14 +0000 (12:09 +0200)]
The merge of copy/pasted code did not account for the fact it had not
been copy pasted
Simon Rit [Thu, 6 Sep 2012 07:53:08 +0000 (09:53 +0200)]
Allow for overlay images with differing temporal length
Simon Rit [Thu, 6 Sep 2012 07:29:29 +0000 (09:29 +0200)]
Fixed reset after sequence reading bug and put copy/pasted code in
function
Simon Rit [Wed, 5 Sep 2012 16:13:08 +0000 (18:13 +0200)]
Open overlay sequence as sequence
Simon Rit [Tue, 4 Sep 2012 11:13:07 +0000 (13:13 +0200)]
Managed opening sequence of overlay images. Parser is ready for
fusion/vf/contour
Simon Rit [Tue, 4 Sep 2012 11:11:44 +0000 (13:11 +0200)]
Fix transform update in sequence of overlay/fusion
Simon Rit [Tue, 4 Sep 2012 09:01:03 +0000 (11:01 +0200)]
Account for reslicing transform in overlay and fusion (contours and vf
have not been tested, TODO)
Simon Rit [Tue, 4 Sep 2012 07:57:57 +0000 (09:57 +0200)]
Fixed bug with linked temporal images
Simon Rit [Tue, 4 Sep 2012 07:29:20 +0000 (09:29 +0200)]
Merge /home/bpresles/Documents/US-IGRT/vv
Benoît Presles [Tue, 4 Sep 2012 07:27:31 +0000 (09:27 +0200)]
us vox reader
Benoît Presles [Tue, 4 Sep 2012 07:24:19 +0000 (09:24 +0200)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
David Sarrut [Mon, 3 Sep 2012 14:55:54 +0000 (16:55 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Mon, 3 Sep 2012 10:51:51 +0000 (12:51 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Mon, 3 Sep 2012 10:45:27 +0000 (12:45 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Mon, 3 Sep 2012 08:26:25 +0000 (10:26 +0200)]
itk4 compatibility
David Sarrut [Mon, 3 Sep 2012 07:39:03 +0000 (09:39 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add possibility to resize/resample mask like input image
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Allow region from a different image type
Simon Rit [Fri, 31 Aug 2012 13:08:04 +0000 (15:08 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Gauthier Bouilhol [Fri, 31 Aug 2012 13:07:37 +0000 (15:07 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Gauthier Bouilhol [Fri, 31 Aug 2012 13:06:15 +0000 (15:06 +0200)]
VF supported (SR)
Simon Rit [Fri, 31 Aug 2012 09:38:18 +0000 (11:38 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Thu, 30 Aug 2012 10:36:48 +0000 (12:36 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Thu, 30 Aug 2012 10:36:24 +0000 (12:36 +0200)]
support for new pixel types
Romulo Pinho [Thu, 30 Aug 2012 10:35:58 +0000 (12:35 +0200)]
support for new pixel types
- removed midP stuff