]> Creatis software - clitk.git/log
clitk.git
6 years agoRemove useless variable
tbaudier [Fri, 9 Mar 2018 10:50:34 +0000 (11:50 +0100)]
Remove useless variable

6 years agoAdd saveAs function to save a text file in clitkHistogramImage
tbaudier [Fri, 9 Mar 2018 10:49:15 +0000 (11:49 +0100)]
Add saveAs function to save a text file in clitkHistogramImage

6 years agoclose #57 The origin is modify in autoCrop, do not modify it again in cropFilter
tbaudier [Mon, 5 Mar 2018 10:39:26 +0000 (11:39 +0100)]
close #57 The origin is modify in autoCrop, do not modify it again in cropFilter

6 years agoUpdate Readme.md to add SonarCloud pins
tbaudier [Wed, 14 Feb 2018 12:50:14 +0000 (13:50 +0100)]
Update Readme.md to add SonarCloud pins

6 years agoAdd SonarCloud files
tbaudier [Wed, 14 Feb 2018 11:51:48 +0000 (12:51 +0100)]
Add SonarCloud files

6 years agoUpdate SonarCloud properties
tbaudier [Wed, 14 Feb 2018 10:56:51 +0000 (11:56 +0100)]
Update SonarCloud properties

6 years agoAdd sonarCloud
tbaudier [Wed, 14 Feb 2018 08:09:00 +0000 (09:09 +0100)]
Add sonarCloud

6 years agoAdd sonarCloud
tbaudier [Tue, 13 Feb 2018 15:58:56 +0000 (16:58 +0100)]
Add sonarCloud

6 years agoAdd ITK v4.13.0
tbaudier [Tue, 13 Feb 2018 08:43:27 +0000 (09:43 +0100)]
Add ITK v4.13.0

6 years agoAdd correct travis cache
tbaudier [Mon, 12 Feb 2018 15:05:20 +0000 (16:05 +0100)]
Add correct travis cache

6 years agoUpdate Travis file to manage cache failure
tbaudier [Fri, 9 Feb 2018 15:18:59 +0000 (16:18 +0100)]
Update Travis file to manage cache failure
Add sonarcloud project

6 years agoAdd -e output for qsub in gate_run_submit_cluster
tbaudier [Thu, 8 Feb 2018 14:49:57 +0000 (15:49 +0100)]
Add -e output for qsub in gate_run_submit_cluster

6 years agoclose #56 Remove ITK_Review dependency
tbaudier [Thu, 1 Feb 2018 15:32:09 +0000 (16:32 +0100)]
close #56 Remove ITK_Review dependency
 Change in clitkBLUTDIRGenericFilter from itk::LabelGeometryImageFilter to itk::LabelStatisticsImageFilter

6 years agoAdd new dicom tag in clitkImage2DicomDose
tbaudier [Tue, 30 Jan 2018 14:28:30 +0000 (15:28 +0100)]
Add new dicom tag in clitkImage2DicomDose

6 years agoAdd correct scaling filter for clitkImage2DicomDoseGenericFilter
tbaudier [Mon, 29 Jan 2018 13:56:52 +0000 (14:56 +0100)]
Add correct scaling filter for clitkImage2DicomDoseGenericFilter
Output to unsigned short int for ITK

6 years agoBe sure to have the correct origin in clitkImage2DicomDose output
tbaudier [Fri, 26 Jan 2018 08:24:46 +0000 (09:24 +0100)]
Be sure to have the correct origin in clitkImage2DicomDose output

6 years agoUse ITK-gdcm with clitkImage2DicomDoseGenericFilter
tbaudier [Thu, 25 Jan 2018 14:00:57 +0000 (15:00 +0100)]
Use ITK-gdcm with clitkImage2DicomDoseGenericFilter

6 years agoDebug verbosity in clitkImage2DicomDose
tbaudier [Thu, 25 Jan 2018 12:03:53 +0000 (13:03 +0100)]
Debug verbosity in clitkImage2DicomDose

6 years agoDescribe clitkUnsharpMask
tbaudier [Thu, 25 Jan 2018 08:57:19 +0000 (09:57 +0100)]
Describe clitkUnsharpMask

6 years agoAdd localization of max and min in clitkImageStatistics
tbaudier [Tue, 23 Jan 2018 14:56:59 +0000 (15:56 +0100)]
Add localization of max and min in clitkImageStatistics

6 years agoException when tag is not found
tbaudier [Mon, 15 Jan 2018 10:36:32 +0000 (11:36 +0100)]
Exception when tag is not found

6 years agoPrecision on clitkBlurImage help
tbaudier [Fri, 12 Jan 2018 15:35:00 +0000 (16:35 +0100)]
Precision on clitkBlurImage help

6 years agoDebug default value when dividing by 0 in clitkImageArithm
tbaudier [Thu, 11 Jan 2018 08:58:01 +0000 (09:58 +0100)]
Debug default value when dividing by 0 in clitkImageArithm

6 years agoCOMP: fix test logic for ITK version which failed with the new ITK v5
Simon Rit [Tue, 2 Jan 2018 15:13:18 +0000 (16:13 +0100)]
COMP: fix test logic for ITK version which failed with the new ITK v5

6 years agoCOMP: renamed min max macros which are no longer allowed
Simon Rit [Tue, 2 Jan 2018 15:11:52 +0000 (16:11 +0100)]
COMP: renamed min max macros which are no longer allowed

Problem showed up on mac os:
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/__undef_min_max:29:2:
warning: : macro max is incompatible with C++.  #undefing max

7 years agoInitialize mConcatenatedFusionTransform
tbaudier [Tue, 5 Dec 2017 13:21:09 +0000 (14:21 +0100)]
Initialize mConcatenatedFusionTransform

7 years agoUpdate README
tbaudier [Fri, 24 Nov 2017 15:27:25 +0000 (16:27 +0100)]
Update README

7 years agoUpdate README with installation instructions
tbaudier [Fri, 17 Nov 2017 15:31:22 +0000 (16:31 +0100)]
Update README with installation instructions

7 years agoUpdate README with installation instructions
tbaudier [Fri, 17 Nov 2017 15:28:02 +0000 (16:28 +0100)]
Update README with installation instructions

7 years agoUpdate clitk for travis
tbaudier [Fri, 17 Nov 2017 11:39:54 +0000 (12:39 +0100)]
Update clitk for travis

7 years agoUpdate itk for travis
tbaudier [Fri, 17 Nov 2017 08:26:39 +0000 (09:26 +0100)]
Update itk for travis

7 years agoUpdate travis file for VTK
tbaudier [Thu, 16 Nov 2017 16:03:21 +0000 (17:03 +0100)]
Update travis file for VTK

7 years agoclitkDicom2Image with imaging machine coordinate system (Identity matrix) by default
tbaudier [Thu, 16 Nov 2017 16:02:20 +0000 (17:02 +0100)]
clitkDicom2Image with imaging machine coordinate system (Identity matrix) by default
Add an option to have it with patient coordinate system

7 years agoOpen Dicom with imaging machine coordinate system (Identity matrix) by default
tbaudier [Thu, 16 Nov 2017 14:49:32 +0000 (15:49 +0100)]
Open Dicom with imaging machine coordinate system (Identity matrix) by default
Add a check box to open it with patient coordinate system

7 years agoClear previous commits for clitkDicom2Image
tbaudier [Thu, 9 Nov 2017 13:33:05 +0000 (14:33 +0100)]
Clear previous commits for clitkDicom2Image

7 years agoDebug clitkDicom2Image with focal_origin option
tbaudier [Thu, 9 Nov 2017 13:22:47 +0000 (14:22 +0100)]
Debug clitkDicom2Image with focal_origin option

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Wed, 8 Nov 2017 12:35:58 +0000 (13:35 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoFix init for clitk image formats
Simon Rit [Wed, 8 Nov 2017 12:35:08 +0000 (13:35 +0100)]
Fix init for clitk image formats

7 years agoDebug #54
tbaudier [Wed, 25 Oct 2017 09:15:39 +0000 (11:15 +0200)]
Debug #54

7 years agoAdd include
tbaudier [Fri, 6 Oct 2017 11:56:01 +0000 (13:56 +0200)]
Add include

7 years agoRemove warning with VTK8.1
tbaudier [Fri, 6 Oct 2017 10:36:08 +0000 (12:36 +0200)]
Remove warning with VTK8.1

7 years agoUpdate to OpenGL2
tbaudier [Fri, 6 Oct 2017 08:40:16 +0000 (10:40 +0200)]
Update to OpenGL2

7 years agoUpdate SplitFilename function
tbaudier [Wed, 4 Oct 2017 12:41:40 +0000 (14:41 +0200)]
Update SplitFilename function

7 years agoDebug #54
tbaudier [Wed, 4 Oct 2017 11:51:15 +0000 (13:51 +0200)]
Debug #54

7 years agoAdd ;
tbaudier [Wed, 4 Oct 2017 09:20:35 +0000 (11:20 +0200)]
Add ;

7 years agoTry to debug RTStruct with rotation matrix
tbaudier [Wed, 4 Oct 2017 08:07:33 +0000 (10:07 +0200)]
Try to debug RTStruct with rotation matrix
Work for clitkDicomRTStruct2ImageFilter not for vv

7 years agoReslice axis for overlay, fusion and vf
tbaudier [Tue, 26 Sep 2017 09:58:45 +0000 (11:58 +0200)]
Reslice axis for overlay, fusion and vf

7 years agoReslice with correct spacing
tbaudier [Tue, 26 Sep 2017 09:26:02 +0000 (11:26 +0200)]
Reslice with correct spacing

7 years agoAdd table of content to doc on wiki
tbaudier [Tue, 26 Sep 2017 07:56:28 +0000 (09:56 +0200)]
Add table of content to doc on wiki

7 years agoAdd doc tool for th wiki
tbaudier [Mon, 25 Sep 2017 15:15:03 +0000 (17:15 +0200)]
Add doc tool for th wiki

7 years agoAdd information for clitkBlur
tbaudier [Mon, 25 Sep 2017 14:46:41 +0000 (16:46 +0200)]
Add information for clitkBlur

7 years agoChange permission right access when installing for registration and segmentation...
tbaudier [Thu, 14 Sep 2017 14:29:04 +0000 (16:29 +0200)]
Change permission right access when installing for registration and segmentation tools

7 years agoChange permission right access when installing for cluster tools and vv
tbaudier [Thu, 14 Sep 2017 14:23:41 +0000 (16:23 +0200)]
Change permission right access when installing for cluster tools and vv

7 years agoChange permission right access
tbaudier [Thu, 14 Sep 2017 14:23:16 +0000 (16:23 +0200)]
Change permission right access

7 years agoAdd adaptive tag to clitkAffineTransform for the transition with clitkResampleImage
tbaudier [Thu, 24 Aug 2017 09:08:26 +0000 (11:08 +0200)]
Add adaptive tag to clitkAffineTransform for the transition with clitkResampleImage

7 years agoRemove warnings with VTK8
tbaudier [Tue, 22 Aug 2017 13:37:56 +0000 (15:37 +0200)]
Remove warnings with VTK8

7 years agoRemove clitkResampleImage
tbaudier [Wed, 9 Aug 2017 13:14:14 +0000 (15:14 +0200)]
Remove clitkResampleImage

7 years agoAdd gaussian filtering options into clitkAffineTransform
tbaudier [Wed, 9 Aug 2017 11:51:42 +0000 (13:51 +0200)]
Add gaussian filtering options into clitkAffineTransform

7 years agoAdd Direction options in clitkAffineTransform
tbaudier [Wed, 9 Aug 2017 09:35:26 +0000 (11:35 +0200)]
Add Direction options in clitkAffineTransform

7 years agoAdd clitkUpdateVRTagDicom tool
tbaudier [Tue, 8 Aug 2017 13:07:37 +0000 (15:07 +0200)]
Add clitkUpdateVRTagDicom tool

7 years agoupdate travis file with vv
tbaudier [Fri, 4 Aug 2017 15:43:10 +0000 (17:43 +0200)]
update travis file with vv

7 years agoupdate travis file with itk
tbaudier [Fri, 4 Aug 2017 11:52:48 +0000 (13:52 +0200)]
update travis file with itk

7 years agoUpdate cache with travis
tbaudier [Fri, 4 Aug 2017 07:14:16 +0000 (09:14 +0200)]
Update cache with travis

7 years agoUpdate Travis file with itk
tbaudier [Thu, 3 Aug 2017 12:40:40 +0000 (14:40 +0200)]
Update Travis file with itk

7 years agoIntegrate MaskOfIntegratedIntensity into clitkBinarizeImage
tbaudier [Thu, 3 Aug 2017 12:40:04 +0000 (14:40 +0200)]
Integrate MaskOfIntegratedIntensity into clitkBinarizeImage

7 years agoTry to debug Qt installation on travis
tbaudier [Thu, 3 Aug 2017 11:44:34 +0000 (13:44 +0200)]
Try to debug Qt installation on travis

7 years agoWrite the correct output tag in clitkPartitionEnergyWindowDicomGenericFilter
tbaudier [Thu, 3 Aug 2017 09:50:21 +0000 (11:50 +0200)]
Write the correct output tag in clitkPartitionEnergyWindowDicomGenericFilter

7 years agoTravis cache debug (vtk)
tbaudier [Thu, 3 Aug 2017 07:53:47 +0000 (09:53 +0200)]
Travis cache debug (vtk)

7 years agoTravis cache debug (vtk)
tbaudier [Thu, 3 Aug 2017 07:39:08 +0000 (09:39 +0200)]
Travis cache debug (vtk)

7 years agoTravis cache debug (vtk)
tbaudier [Thu, 3 Aug 2017 07:31:34 +0000 (09:31 +0200)]
Travis cache debug (vtk)

7 years agoTravis cache debug (vtk)
tbaudier [Thu, 3 Aug 2017 07:15:13 +0000 (09:15 +0200)]
Travis cache debug (vtk)

7 years agoAdd clitkPartitionEnergyWindowDicom tool
tbaudier [Tue, 1 Aug 2017 14:52:26 +0000 (16:52 +0200)]
Add clitkPartitionEnergyWindowDicom tool

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Tue, 1 Aug 2017 13:34:41 +0000 (15:34 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoAdd option to variance with only one number
tbaudier [Tue, 1 Aug 2017 13:34:10 +0000 (15:34 +0200)]
Add option to variance with only one number

7 years agoadapt power merge for osx
David Sarrut [Wed, 26 Jul 2017 06:56:51 +0000 (08:56 +0200)]
adapt power merge for osx

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Wed, 26 Jul 2017 06:13:15 +0000 (08:13 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoadapt to osx
David Sarrut [Wed, 26 Jul 2017 06:12:50 +0000 (08:12 +0200)]
adapt to osx

7 years agoImage Orientation with Dicom debug
tbaudier [Mon, 24 Jul 2017 12:28:34 +0000 (14:28 +0200)]
Image Orientation with Dicom debug

7 years agoDebug hdr condition in gate_power_merge.sh
tbaudier [Fri, 23 Jun 2017 08:39:29 +0000 (10:39 +0200)]
Debug hdr condition in gate_power_merge.sh

7 years agoDebug RTStruct offset in z direction with vtk6 (next part)
tbaudier [Wed, 14 Jun 2017 14:40:03 +0000 (16:40 +0200)]
Debug RTStruct offset in z direction with vtk6 (next part)

7 years agoSeparate term to term multiplication and dotproduct with VectorArithm
tbaudier [Mon, 12 Jun 2017 13:04:35 +0000 (15:04 +0200)]
Separate term to term multiplication and dotproduct with VectorArithm

7 years agoRemove warning with VTK7.1
tbaudier [Fri, 9 Jun 2017 14:57:50 +0000 (16:57 +0200)]
Remove warning with VTK7.1

7 years agoenglish mistake
tbaudier [Fri, 9 Jun 2017 14:55:19 +0000 (16:55 +0200)]
english mistake

7 years agoCorrect sorting order in MaskOfIntegratedIntensity tool
tbaudier [Wed, 7 Jun 2017 14:51:41 +0000 (16:51 +0200)]
Correct sorting order in MaskOfIntegratedIntensity tool

7 years agoDebug clitkMaskOfIntegratedIntensityGenericFilter to avoid c++11
tbaudier [Tue, 6 Jun 2017 08:16:18 +0000 (10:16 +0200)]
Debug clitkMaskOfIntegratedIntensityGenericFilter to avoid c++11

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Tue, 6 Jun 2017 06:49:10 +0000 (08:49 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoadd tool to compute MaskOfIntegratedIntensity
David Sarrut [Fri, 2 Jun 2017 11:04:12 +0000 (13:04 +0200)]
add tool to compute MaskOfIntegratedIntensity

7 years agoremove warning
David Sarrut [Fri, 2 Jun 2017 11:03:53 +0000 (13:03 +0200)]
remove warning

7 years agoDebug previous commit with correct include
tbaudier [Thu, 1 Jun 2017 13:38:08 +0000 (15:38 +0200)]
Debug previous commit with correct include

7 years agoAdd clitkImage2DicomDose tool
tbaudier [Thu, 1 Jun 2017 13:25:52 +0000 (15:25 +0200)]
Add clitkImage2DicomDose tool

7 years agoclean useless variables
tbaudier [Thu, 1 Jun 2017 13:25:22 +0000 (15:25 +0200)]
clean useless variables

7 years agoMerge branch 'master' of https://github.com/open-vv/vv
tbaudier [Tue, 23 May 2017 15:00:03 +0000 (17:00 +0200)]
Merge branch 'master' of https://github.com/open-vv/vv

7 years agoDebug RTStruct offset in z direction with vtk6
tbaudier [Tue, 23 May 2017 14:45:05 +0000 (16:45 +0200)]
Debug RTStruct offset in z direction with vtk6

7 years agoRead mhd information and write dicom sequence about energy
tbaudier [Tue, 23 May 2017 14:10:41 +0000 (16:10 +0200)]
Read mhd information and write dicom sequence about energy

7 years agoAdd code to write dicom sequence tag in gateSimulation2Dicom
tbaudier [Fri, 19 May 2017 15:04:29 +0000 (17:04 +0200)]
Add code to write dicom sequence tag in gateSimulation2Dicom

7 years agoToward write sequence dicom tags
tbaudier [Thu, 18 May 2017 15:19:54 +0000 (17:19 +0200)]
Toward write sequence dicom tags

7 years agoUpdate GateSimulation2Dicom tool with test functions
tbaudier [Wed, 17 May 2017 14:54:57 +0000 (16:54 +0200)]
Update GateSimulation2Dicom tool with test functions

7 years agoclean clitkGateSimulation2DicomGenericFilter
tbaudier [Mon, 15 May 2017 15:43:41 +0000 (17:43 +0200)]
clean clitkGateSimulation2DicomGenericFilter

7 years agoRemove unapplicable clitk tool in CMakeLists
tbaudier [Mon, 15 May 2017 14:26:21 +0000 (16:26 +0200)]
Remove unapplicable clitk tool in CMakeLists

7 years agoAdd GateSimulation2Dicom tool
tbaudier [Mon, 15 May 2017 13:33:00 +0000 (15:33 +0200)]
Add GateSimulation2Dicom tool