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Creatis software - clitk.git/log
David Sarrut [Mon, 17 Oct 2011 08:43:10 +0000 (10:43 +0200)]
Change mhd to mha
David Sarrut [Mon, 17 Oct 2011 08:40:49 +0000 (10:40 +0200)]
Remove debug
David Sarrut [Mon, 17 Oct 2011 08:40:27 +0000 (10:40 +0200)]
Correct structures names
David Sarrut [Mon, 17 Oct 2011 08:40:20 +0000 (10:40 +0200)]
Correct structures names
David Sarrut [Mon, 17 Oct 2011 08:40:11 +0000 (10:40 +0200)]
Correct structures names
David Sarrut [Mon, 17 Oct 2011 08:39:25 +0000 (10:39 +0200)]
Remove debug
David Sarrut [Mon, 17 Oct 2011 08:39:13 +0000 (10:39 +0200)]
Change mhd to mha
David Sarrut [Mon, 17 Oct 2011 08:38:59 +0000 (10:38 +0200)]
Enhance the warning output
Gauthier Bouilhol [Wed, 12 Oct 2011 11:21:27 +0000 (13:21 +0200)]
create_sequence.sh and dcm_sort_by_field.sh removed
Gauthier Bouilhol [Tue, 11 Oct 2011 14:49:31 +0000 (16:49 +0200)]
clitk header added
dbcache [Tue, 11 Oct 2011 14:38:04 +0000 (16:38 +0200)]
correction in motion mask script
Gauthier Bouilhol [Tue, 11 Oct 2011 14:30:15 +0000 (16:30 +0200)]
now compatible with GDCM 1.x and GDCM 2.x
dbcache [Tue, 11 Oct 2011 12:18:12 +0000 (14:18 +0200)]
correction in motion mask script
Vivien Delmon [Tue, 11 Oct 2011 10:05:29 +0000 (12:05 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Vivien Delmon [Tue, 11 Oct 2011 09:44:37 +0000 (11:44 +0200)]
Make clitkDicomWave2Text compile with itk4
Romulo Pinho [Tue, 11 Oct 2011 09:35:42 +0000 (11:35 +0200)]
removing stray characters from beginning of files
Romulo Pinho [Tue, 11 Oct 2011 08:09:44 +0000 (10:09 +0200)]
Compilation error related to GDCM-2
David Sarrut [Mon, 10 Oct 2011 12:16:20 +0000 (14:16 +0200)]
Remove debug and correct slice position for CaudlaMarginOf BV
David Sarrut [Mon, 10 Oct 2011 12:15:44 +0000 (14:15 +0200)]
Add comment (future changes todo)
David Sarrut [Mon, 10 Oct 2011 12:15:31 +0000 (14:15 +0200)]
Change comments
David Sarrut [Mon, 10 Oct 2011 07:55:57 +0000 (09:55 +0200)]
SaveScreenshotAllSlices : filenames correction and correct update to force the display of ROI.
David Sarrut [Mon, 10 Oct 2011 07:04:51 +0000 (09:04 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Gauthier Bouilhol [Fri, 7 Oct 2011 12:26:33 +0000 (14:26 +0200)]
clitkDicomWave2Text tool added
Romulo Pinho [Fri, 7 Oct 2011 09:45:52 +0000 (11:45 +0200)]
install of motion_amplitude script
Romulo Pinho [Fri, 7 Oct 2011 09:41:51 +0000 (11:41 +0200)]
calculation of an RTstruct's motion amplitude
Romulo Pinho [Thu, 6 Oct 2011 15:17:35 +0000 (17:17 +0200)]
clitkImageStatistics - small robustness issue
Romulo Pinho [Thu, 6 Oct 2011 15:03:06 +0000 (17:03 +0200)]
clitkImageStatistics - support for 4D images
David Sarrut [Wed, 5 Oct 2011 09:05:59 +0000 (11:05 +0200)]
Add an option to the screenshots menu to save all slices (with ROI and transparency)
David Sarrut [Wed, 5 Oct 2011 09:05:27 +0000 (11:05 +0200)]
Remove debug and check that options are correct
David Sarrut [Wed, 5 Oct 2011 09:05:07 +0000 (11:05 +0200)]
Add station 5 and 6
David Sarrut [Wed, 5 Oct 2011 09:04:42 +0000 (11:04 +0200)]
Add Station 5 and 6
David Sarrut [Wed, 5 Oct 2011 09:04:29 +0000 (11:04 +0200)]
Correct bug in support for 4RL
David Sarrut [Wed, 5 Oct 2011 09:04:11 +0000 (11:04 +0200)]
Station 4RL is not ok
David Sarrut [Wed, 5 Oct 2011 09:03:46 +0000 (11:03 +0200)]
Correct PrintOptions
David Sarrut [Wed, 5 Oct 2011 09:02:45 +0000 (11:02 +0200)]
Add "SliceBySliceBuildLineSegmentAccordingToMinimalDistanceBetweenStructures" (and win the best price for the longest function name in clitk)
Romulo Pinho [Tue, 4 Oct 2011 14:40:04 +0000 (16:40 +0200)]
clitkImageStatistics supports multi-channel images
David Sarrut [Tue, 4 Oct 2011 07:25:04 +0000 (09:25 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Romulo Pinho [Mon, 3 Oct 2011 15:26:54 +0000 (17:26 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Romulo Pinho [Mon, 3 Oct 2011 15:26:28 +0000 (17:26 +0200)]
more changes related to fusion control
Romulo Pinho [Mon, 3 Oct 2011 15:24:40 +0000 (17:24 +0200)]
corrections in overlay opacity and threshold
David Sarrut [Mon, 3 Oct 2011 06:27:21 +0000 (08:27 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
mpech [Thu, 29 Sep 2011 14:08:44 +0000 (16:08 +0200)]
how to make nightly builds and to test tools
mpech [Thu, 29 Sep 2011 13:57:06 +0000 (15:57 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
David Sarrut [Thu, 29 Sep 2011 10:53:48 +0000 (12:53 +0200)]
Add checking of the options
David Sarrut [Thu, 29 Sep 2011 05:27:02 +0000 (07:27 +0200)]
remove options for some stations
David Sarrut [Thu, 29 Sep 2011 05:26:29 +0000 (07:26 +0200)]
New version of S3P (simpler)
David Sarrut [Thu, 29 Sep 2011 05:25:55 +0000 (07:25 +0200)]
Add S4ARL station extraction
David Sarrut [Thu, 29 Sep 2011 05:25:27 +0000 (07:25 +0200)]
small bug (current step number)
David Sarrut [Thu, 29 Sep 2011 05:25:08 +0000 (07:25 +0200)]
Remove VertebralBody
David Sarrut [Thu, 29 Sep 2011 05:24:31 +0000 (07:24 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Gauthier Bouilhol [Wed, 28 Sep 2011 16:56:42 +0000 (18:56 +0200)]
sorted directory is put outside the original one
Gauthier Bouilhol [Wed, 28 Sep 2011 16:55:51 +0000 (18:55 +0200)]
print directory when no phase found
mpech [Wed, 28 Sep 2011 15:10:21 +0000 (17:10 +0200)]
test for warpImage 3d
David Sarrut [Wed, 28 Sep 2011 14:37:25 +0000 (16:37 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
mpech [Wed, 28 Sep 2011 14:25:35 +0000 (16:25 +0200)]
forgot to uncomment...
mpech [Wed, 28 Sep 2011 14:23:57 +0000 (16:23 +0200)]
when a tool failed, no mhd was produced but the test still succeeded.
mpech [Wed, 28 Sep 2011 12:48:26 +0000 (14:48 +0200)]
testing tools doesnt require vv
mpech [Wed, 28 Sep 2011 09:25:17 +0000 (11:25 +0200)]
cl was not valid for setBackground
David Sarrut [Wed, 28 Sep 2011 05:47:18 +0000 (07:47 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Gauthier Bouilhol [Tue, 27 Sep 2011 16:15:11 +0000 (18:15 +0200)]
search prefix and suffix
mpech [Tue, 27 Sep 2011 14:40:27 +0000 (16:40 +0200)]
clitkSetBackground and renaming binarize
Simon Rit [Mon, 26 Sep 2011 15:18:48 +0000 (17:18 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
mpech [Mon, 26 Sep 2011 09:25:08 +0000 (11:25 +0200)]
mhd files are compared ignoring the ITK_InputFilterName line added by itkv4
David Sarrut [Mon, 26 Sep 2011 07:08:38 +0000 (09:08 +0200)]
Now inherit from clitkStructuresExtractionFilter
David Sarrut [Mon, 26 Sep 2011 07:08:21 +0000 (09:08 +0200)]
Now inherit from clitkStructuresExtractionFilter
David Sarrut [Mon, 26 Sep 2011 07:08:00 +0000 (09:08 +0200)]
Simplification of options
David Sarrut [Mon, 26 Sep 2011 07:07:48 +0000 (09:07 +0200)]
Cosmetic
David Sarrut [Mon, 26 Sep 2011 07:07:31 +0000 (09:07 +0200)]
Adapted with RelativePostion list management
David Sarrut [Mon, 26 Sep 2011 07:07:09 +0000 (09:07 +0200)]
Add dependence with RelativePosition ggo
David Sarrut [Mon, 26 Sep 2011 07:06:48 +0000 (09:06 +0200)]
Remove debug messages
David Sarrut [Mon, 26 Sep 2011 07:06:35 +0000 (09:06 +0200)]
Remove debug
David Sarrut [Mon, 26 Sep 2011 07:05:51 +0000 (09:05 +0200)]
Cosmetic
David Sarrut [Mon, 26 Sep 2011 07:05:30 +0000 (09:05 +0200)]
Small options modification
David Sarrut [Mon, 26 Sep 2011 07:05:04 +0000 (09:05 +0200)]
Comment ImageToDicomRT because does not work
David Sarrut [Mon, 26 Sep 2011 07:04:33 +0000 (09:04 +0200)]
File to manage a list of RelativePosition filters
David Sarrut [Mon, 26 Sep 2011 07:04:02 +0000 (09:04 +0200)]
Extraction of S1RL
David Sarrut [Mon, 26 Sep 2011 07:03:33 +0000 (09:03 +0200)]
Change "UseASingleObjectConnectedComponentBySlice" by "UseTheLargestObjectCCL"
David Sarrut [Mon, 26 Sep 2011 07:01:56 +0000 (09:01 +0200)]
Add "Or" function
David Sarrut [Mon, 26 Sep 2011 07:01:31 +0000 (09:01 +0200)]
Add PrintOptions and change orientation type names
David Sarrut [Mon, 26 Sep 2011 07:00:50 +0000 (09:00 +0200)]
Add VerboseImageSize flag
David Sarrut [Mon, 26 Sep 2011 07:00:23 +0000 (09:00 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
dbcache [Thu, 22 Sep 2011 12:42:38 +0000 (14:42 +0200)]
installation of more scripts
mpech [Wed, 21 Sep 2011 15:52:55 +0000 (17:52 +0200)]
morphoMath tests
mpech [Wed, 21 Sep 2011 14:31:21 +0000 (16:31 +0200)]
test for lung3d.mhd
mpech [Wed, 21 Sep 2011 09:29:06 +0000 (11:29 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
David Sarrut [Wed, 21 Sep 2011 07:51:29 +0000 (09:51 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
Romulo Pinho [Tue, 20 Sep 2011 16:47:52 +0000 (18:47 +0200)]
support for mha images
mpech [Tue, 20 Sep 2011 15:28:53 +0000 (17:28 +0200)]
comparing raw files automatically. refFile can end with .mhd or not
mpech [Tue, 20 Sep 2011 13:53:11 +0000 (15:53 +0200)]
add tests for imageArithm
Romulo Pinho [Mon, 19 Sep 2011 11:56:11 +0000 (13:56 +0200)]
undoing StructureSet-related patch
Simon Rit [Sat, 17 Sep 2011 21:08:09 +0000 (17:08 -0400)]
Attempt to manually adjust the layout of the overlay panel for fusion to minimize its width
Simon Rit [Fri, 16 Sep 2011 16:29:36 +0000 (18:29 +0200)]
Files were not opened in binary mode which caused problems with vox files under windows
Simon Rit [Fri, 16 Sep 2011 16:22:02 +0000 (18:22 +0200)]
Do both OuputDebugString and standard output for DD on Windows
Romulo Pinho [Fri, 16 Sep 2011 09:23:42 +0000 (11:23 +0200)]
Bug/issue 704
David Sarrut [Fri, 16 Sep 2011 09:18:50 +0000 (11:18 +0200)]
Merge branch 'master' of /home/dsarrut/clitk3.server
mpech [Fri, 16 Sep 2011 09:12:43 +0000 (11:12 +0200)]
replacing \r\n by \n in generated mhd files when running toolTestRunner
Simon Rit [Wed, 14 Sep 2011 11:18:24 +0000 (13:18 +0200)]
No .gitignore file Joël! Put .gitignore in your .gitignore file.
Romulo Pinho [Tue, 13 Sep 2011 15:36:36 +0000 (17:36 +0200)]
finer control over fusion transparency
Romulo Pinho [Tue, 13 Sep 2011 14:07:22 +0000 (16:07 +0200)]
applying another patch from Joel
Romulo Pinho [Tue, 13 Sep 2011 08:39:33 +0000 (10:39 +0200)]
patches sent from Joel Schaerer
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