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Creatis software - clitk.git/log
David Sarrut [Tue, 14 Jan 2014 07:11:30 +0000 (08:11 +0100)]
Trailing spaces
David Sarrut [Tue, 14 Jan 2014 07:10:44 +0000 (08:10 +0100)]
Add dcm extension
David Sarrut [Tue, 14 Jan 2014 07:09:55 +0000 (08:09 +0100)]
Add display matrix option
David Sarrut [Tue, 14 Jan 2014 06:54:55 +0000 (07:54 +0100)]
Remove warning sprintf
David Sarrut [Tue, 14 Jan 2014 06:54:33 +0000 (07:54 +0100)]
Copy macro files for log
David Sarrut [Tue, 14 Jan 2014 06:54:09 +0000 (07:54 +0100)]
Now work for single thread simulation
David Sarrut [Fri, 10 Jan 2014 10:15:18 +0000 (11:15 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 10 Jan 2014 10:14:50 +0000 (11:14 +0100)]
Back to the correct version... Benoit you will be hanged !
Benoît Presles [Thu, 9 Jan 2014 13:43:47 +0000 (14:43 +0100)]
new tool to normalize an image
Simon Rit [Sat, 4 Jan 2014 15:23:43 +0000 (16:23 +0100)]
Detect ITK_USE_SYSTEM_GDCM with target
Simon Rit [Fri, 3 Jan 2014 18:27:28 +0000 (19:27 +0100)]
Remove setmode definition since it was not used and it prevents
Simon Rit [Wed, 18 Dec 2013 15:25:28 +0000 (16:25 +0100)]
Fixed issues with --like option
Simon Rit [Tue, 10 Dec 2013 12:20:48 +0000 (13:20 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Tue, 10 Dec 2013 12:14:15 +0000 (13:14 +0100)]
Updated help of vv command line
Simon Rit [Mon, 9 Dec 2013 20:55:01 +0000 (21:55 +0100)]
Robust detection of GDCM compilation by ITK: made it robust to ITK installation
Benoît Presles [Wed, 27 Nov 2013 09:54:56 +0000 (10:54 +0100)]
inverted IO reader order to solve a bug with vox files
Benoît Presles [Thu, 21 Nov 2013 12:44:39 +0000 (13:44 +0100)]
deleted an extra space in order to be able to grep the results of clitkImageInfo
Benoît Presles [Tue, 12 Nov 2013 09:30:52 +0000 (10:30 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Benoît Presles [Tue, 12 Nov 2013 09:29:58 +0000 (10:29 +0100)]
new tool to normalize image intensity
Simon Rit [Fri, 8 Nov 2013 11:21:48 +0000 (12:21 +0100)]
When clicking on the all button, also propagate fusion and overlay W/L
Simon Rit [Fri, 8 Nov 2013 11:09:55 +0000 (12:09 +0100)]
Added missing init for IO factories
Simon Rit [Thu, 31 Oct 2013 15:47:25 +0000 (16:47 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Thu, 31 Oct 2013 15:47:14 +0000 (16:47 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Thu, 31 Oct 2013 15:46:55 +0000 (16:46 +0100)]
Tool to multiply 4x4 matrices
Simon Rit [Thu, 31 Oct 2013 15:45:21 +0000 (16:45 +0100)]
Option to save VV transform (mhd + .mat) in the new mhd
Simon Rit [Thu, 31 Oct 2013 14:43:11 +0000 (15:43 +0100)]
Merge several run results in one
Simon Rit [Thu, 31 Oct 2013 14:37:12 +0000 (15:37 +0100)]
Allow symbolic links
Benoît Presles [Tue, 29 Oct 2013 18:00:31 +0000 (19:00 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Benoît Presles [Tue, 29 Oct 2013 17:56:40 +0000 (18:56 +0100)]
added the possibility to compute the Laplacian of Gaussian (LoG) of an image
Vivien Delmon [Mon, 28 Oct 2013 12:24:45 +0000 (13:24 +0100)]
Remove itkSetMacro
Vivien Delmon [Mon, 28 Oct 2013 12:23:45 +0000 (13:23 +0100)]
Remove useless include and trailing whitespaces
Vivien Delmon [Fri, 25 Oct 2013 13:44:38 +0000 (15:44 +0200)]
Do not compile clitkDice with ITK < 4
clitkDice needs an itkLabelOverlapMeasuresImageFilter.h that was present
in clitk but has been removed (by David Sarrut !!) in
f4854864b1e9dacf51ffee720eeb4c72edb59e4f
The class is now part of ITK > 4.
Benoît Presles [Fri, 18 Oct 2013 13:12:34 +0000 (15:12 +0200)]
new tool to compute the laplacian of an image
Benoît Presles [Thu, 17 Oct 2013 16:18:23 +0000 (18:18 +0200)]
deleted an extra quote
Benoît Presles [Thu, 17 Oct 2013 16:11:18 +0000 (18:11 +0200)]
added an optional mask + the possibility to get a normalized output image
Benoît Presles [Wed, 16 Oct 2013 14:05:51 +0000 (16:05 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Benoît Presles [Wed, 16 Oct 2013 14:04:59 +0000 (16:04 +0200)]
gradient magnitude tool
Vivien Delmon [Wed, 9 Oct 2013 09:16:07 +0000 (11:16 +0200)]
Refactor cluster_tools CMakeLists
Simon Rit [Thu, 3 Oct 2013 10:49:47 +0000 (12:49 +0200)]
Simon Rit [Mon, 30 Sep 2013 14:14:29 +0000 (16:14 +0200)]
Add mha in uncertainty files and error message if unhandled file format
Simon Rit [Mon, 30 Sep 2013 14:09:44 +0000 (16:09 +0200)]
Allow for uncertainties which name does not start with output
Simon Rit [Mon, 23 Sep 2013 14:26:00 +0000 (16:26 +0200)]
Remove warning with .mha files
Simon Rit [Mon, 23 Sep 2013 14:21:04 +0000 (16:21 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Fri, 13 Sep 2013 19:36:01 +0000 (21:36 +0200)]
Improved Elastix conversion
Benoît Presles [Fri, 6 Sep 2013 08:03:08 +0000 (10:03 +0200)]
revert the local CLITK_USE_SYSTEM_GDCM path - not wanted to commit it
Benoît Presles [Thu, 5 Sep 2013 17:07:55 +0000 (19:07 +0200)]
Median Filter + some bug corrections in Resample Image Filter
Simon Rit [Wed, 4 Sep 2013 12:31:41 +0000 (14:31 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Vivien Delmon [Wed, 21 Aug 2013 09:54:40 +0000 (11:54 +0200)]
Use IsNormal instead of std::isnormal (C++11)
Vivien Delmon [Wed, 21 Aug 2013 09:32:52 +0000 (11:32 +0200)]
Revert "Remove C++11 call to isnormal"
This reverts commit
a845c6a04ecfeedc8eced5f4051e06ee88c59e90 .
Vivien Delmon [Wed, 21 Aug 2013 09:18:27 +0000 (11:18 +0200)]
Remove C++11 call to isnormal
agata [Wed, 14 Aug 2013 19:11:15 +0000 (21:11 +0200)]
Remove build clitk options in superbuild, add gdcm 2.2.4.
David Sarrut [Mon, 29 Jul 2013 06:07:03 +0000 (08:07 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Mon, 29 Jul 2013 06:05:47 +0000 (08:05 +0200)]
Remove warning on mac (vtk)
Agata Krason [Fri, 26 Jul 2013 15:35:46 +0000 (17:35 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Agata Krason [Fri, 26 Jul 2013 15:33:06 +0000 (17:33 +0200)]
Superbuild : Change version gdcm - 2.2.4, itk 4.4.0 and add make install to VV.
David Sarrut [Fri, 26 Jul 2013 13:39:53 +0000 (15:39 +0200)]
Add cluster_tool scripts in install
David Sarrut [Fri, 26 Jul 2013 13:12:27 +0000 (15:12 +0200)]
First version of gate_make_merge_release (for gatelab)
David Sarrut [Fri, 26 Jul 2013 13:05:15 +0000 (15:05 +0200)]
Add clitkImageUncertainty (for gate dose uncertainty)
David Sarrut [Fri, 26 Jul 2013 13:01:41 +0000 (15:01 +0200)]
Moved from repository clitk.private to tools
gueth [Thu, 3 Mar 2011 15:03:30 +0000 (15:03 +0000)]
uncertainty=100% when no dose in voxel (as in Gate)
schaerer [Thu, 28 Oct 2010 12:42:11 +0000 (12:42 +0000)]
compatibility with the newest gengetopt
dsarrut [Tue, 9 Mar 2010 15:45:11 +0000 (15:45 +0000)]
- make compatible with new signal folder - add common.cmake (to generate ggo files)
schaerer [Tue, 19 Jan 2010 16:02:52 +0000 (16:02 +0000)]
tests_dav
David Sarrut [Fri, 26 Jul 2013 12:57:35 +0000 (14:57 +0200)]
Add computation of statistical uncertainty
David Sarrut [Fri, 26 Jul 2013 06:58:16 +0000 (08:58 +0200)]
indent
David Sarrut [Fri, 26 Jul 2013 06:52:03 +0000 (08:52 +0200)]
Add tool_install for clitkMergeRootFiles & clitkMergeAsciiDoseActor
David Sarrut [Fri, 26 Jul 2013 06:47:54 +0000 (08:47 +0200)]
Add clitkMergeRootFiles
David Sarrut [Fri, 26 Jul 2013 06:44:39 +0000 (08:44 +0200)]
Moved from repository clitk.private to tools
Pierre Gueth [Thu, 7 Feb 2013 14:35:00 +0000 (15:35 +0100)]
merger works when files are ordered
Pierre Gueth [Thu, 7 Feb 2013 14:01:20 +0000 (15:01 +0100)]
switched to gjm merger for pet
Pierre Gueth [Thu, 7 Feb 2013 13:37:24 +0000 (14:37 +0100)]
copied gatemergemanager from gate-creatis
David Sarrut [Fri, 26 Jul 2013 06:43:32 +0000 (08:43 +0200)]
mv file
David Sarrut [Fri, 26 Jul 2013 06:43:19 +0000 (08:43 +0200)]
remove files
David Sarrut [Fri, 26 Jul 2013 06:33:53 +0000 (08:33 +0200)]
Moved from repository clitk.private to tools
Pierre Gueth [Thu, 7 Feb 2013 15:03:32 +0000 (16:03 +0100)]
pet merger seams to work
Pierre Gueth [Thu, 7 Feb 2013 14:35:00 +0000 (15:35 +0100)]
merger works when files are ordered
Pierre Gueth [Thu, 7 Feb 2013 14:01:20 +0000 (15:01 +0100)]
switched to gjm merger for pet
Pierre Gueth [Thu, 7 Feb 2013 13:17:09 +0000 (14:17 +0100)]
more root merger
Pierre Gueth [Mon, 4 Feb 2013 12:18:11 +0000 (13:18 +0100)]
variable name set
Pierre Gueth [Fri, 1 Feb 2013 15:39:35 +0000 (16:39 +0100)]
pet output detection
Pierre Gueth [Fri, 1 Feb 2013 15:31:19 +0000 (16:31 +0100)]
fixed clitkMergeRootFiles build
gueth [Fri, 20 May 2011 14:44:49 +0000 (14:44 +0000)]
TVirtualPlugin fix for non x system
dsarrut [Tue, 30 Mar 2010 14:04:01 +0000 (14:04 +0000)]
- merger for gate
David Sarrut [Fri, 26 Jul 2013 06:24:56 +0000 (08:24 +0200)]
Add clitkMergeAsciiDoseActor
David Sarrut [Fri, 26 Jul 2013 06:20:58 +0000 (08:20 +0200)]
Moved from repository clitk.private to tools
dsarrut [Tue, 30 Mar 2010 14:04:01 +0000 (14:04 +0000)]
- merger for gate
David Sarrut [Fri, 26 Jul 2013 06:18:16 +0000 (08:18 +0200)]
Fix compile issue (add include <iterator>)
David Sarrut [Fri, 26 Jul 2013 05:56:17 +0000 (07:56 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Thu, 25 Jul 2013 15:31:03 +0000 (17:31 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Thu, 25 Jul 2013 12:04:17 +0000 (14:04 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Agata Krason [Thu, 25 Jul 2013 11:02:17 +0000 (13:02 +0200)]
Add to superbuild gdcm and option clitk registration, segmentation and tools.
David Sarrut [Thu, 25 Jul 2013 09:32:39 +0000 (11:32 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Thu, 25 Jul 2013 08:51:23 +0000 (10:51 +0200)]
Tool to inverse a matrix
Simon Rit [Thu, 25 Jul 2013 08:50:04 +0000 (10:50 +0200)]
Move matrix to string conversion to common library
Agata Krason [Thu, 25 Jul 2013 07:25:20 +0000 (09:25 +0200)]
Add to VV superbuild gdcm option.
Simon Rit [Wed, 24 Jul 2013 22:06:59 +0000 (00:06 +0200)]
Allow reading .elx file for rigid transformations, i.e. the result of
Simon Rit [Wed, 24 Jul 2013 22:04:34 +0000 (00:04 +0200)]
Used euler3DTransform instead of CenteredEulerTransform. Similar result
David Sarrut [Wed, 24 Jul 2013 15:05:51 +0000 (17:05 +0200)]
Add define to avoir vtk warning on mac
David Sarrut [Wed, 24 Jul 2013 15:05:26 +0000 (17:05 +0200)]
Add define to avoid vtk warning on mac
Simon Rit [Wed, 24 Jul 2013 15:04:09 +0000 (17:04 +0200)]
Go from matrix to elastix file
git://git.creatis.insa-lyon.fr / clitk.git / log