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Creatis software - clitk.git/log
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
First version to convert image to dicomrtstruct
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove gdcm dep
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove debug
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Use vtkGDCMPolyDataReader to read mesh
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Indicate that shift cuold be used on mac to grab image
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Allow to combine multiple elastix transfo
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Compile with both itk3 and itk4
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
remove file present in (system) gdcm
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Read with vtkGDCMPolyDataReader
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Read dicom-rt with vtkGDCMPolyDataReader
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add gdcm lib is compiled with system gdcm
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Check if itk was compiled with system_gdcm
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove unused option
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Change tool description
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Replace old gdcm code with vtkGDCMPolyData
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
for vvToolROIManager, add link with gdcm-vtk
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Check if use system gdcm to include vtkGDCMPolyData
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove verbose debug
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add variable CLITK_USE_SYSTEM_GDCM
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add libvtkgdcm to clitkDicomRTStructLib
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add option to link with external gdcm (forrt-struct + itk4)
David Sarrut [Tue, 21 May 2013 06:50:16 +0000 (08:50 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Benoît Presles [Thu, 16 May 2013 09:47:41 +0000 (11:47 +0200)]
Fixed bug with CMakeLists and VTK
rblanc [Wed, 15 May 2013 15:01:10 +0000 (17:01 +0200)]
added an option to transform vtk meshes with tool clitkTransformLandmarks
U-PC-de-Rémi\Rémi [Tue, 7 May 2013 16:04:50 +0000 (18:04 +0200)]
Made the mesh decimation optional, and tunable. If on, the resulting mesh may have problems and can be unreadable by transformix
David Sarrut [Wed, 24 Apr 2013 06:21:28 +0000 (08:21 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
rblanc [Mon, 22 Apr 2013 16:47:42 +0000 (18:47 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
rblanc [Mon, 22 Apr 2013 16:47:38 +0000 (18:47 +0200)]
fusion sequence: artificially thicken the US images to avoid slices being *hidden behind*, and fixed some errors with close/reload
David Sarrut [Fri, 19 Apr 2013 11:22:58 +0000 (13:22 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Vivien Delmon [Thu, 18 Apr 2013 15:48:45 +0000 (17:48 +0200)]
Apply log before casting back to pixel type
Vivien Delmon [Thu, 18 Apr 2013 15:34:10 +0000 (17:34 +0200)]
Remove class instanciation in header file.
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Deal with options --like and --spacinglike at the same time
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add option "spacinglike"
David Sarrut [Mon, 8 Apr 2013 06:18:35 +0000 (08:18 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add option to read Elastix transform (3D affine)
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Fix deprecated warning (Begin -> GoToBegin)
rblanc [Tue, 2 Apr 2013 14:34:41 +0000 (16:34 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
rblanc [Tue, 2 Apr 2013 14:34:33 +0000 (16:34 +0200)]
updated clitkBinaryImageToMesh, added the possibility to write a vtkPolyData output file + fixed documentation
rblanc [Tue, 2 Apr 2013 13:47:30 +0000 (15:47 +0200)]
small fixes in fusion sequence visualization mode
David Sarrut [Tue, 2 Apr 2013 08:17:06 +0000 (10:17 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
add nbewnew parameters to SliceBySliceSetBackgroundFromLineSeparation
Benoît Presles [Fri, 29 Mar 2013 15:27:49 +0000 (16:27 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Benoît Presles [Fri, 29 Mar 2013 15:26:58 +0000 (16:26 +0100)]
added metadata to vv
François Smekens [Wed, 20 Mar 2013 17:31:00 +0000 (18:31 +0100)]
Fixed problem with unsigned short
Simon Rit [Wed, 20 Mar 2013 15:30:40 +0000 (16:30 +0100)]
Xrad image reader
Benoît Presles [Thu, 7 Mar 2013 10:09:48 +0000 (11:09 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Wed, 6 Mar 2013 12:25:01 +0000 (13:25 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Tue, 5 Mar 2013 14:43:37 +0000 (15:43 +0100)]
mode is not mandatory since a default value is provided
Simon Rit [Tue, 5 Mar 2013 10:54:08 +0000 (11:54 +0100)]
Improved robustness with Esrf reader
Vivien Delmon [Tue, 5 Mar 2013 09:29:39 +0000 (10:29 +0100)]
Add (nightly) to NSIS_DISPLAY_NAME for vv install on windows
Vivien Delmon [Mon, 4 Mar 2013 16:14:38 +0000 (17:14 +0100)]
Add bin directory to the start menu link for windows
David Sarrut [Mon, 4 Mar 2013 15:44:55 +0000 (16:44 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Vivien Delmon [Mon, 4 Mar 2013 15:29:30 +0000 (16:29 +0100)]
Add CMake entry to compile clitkMaskLandmarks
Vivien Delmon [Mon, 4 Mar 2013 15:26:14 +0000 (16:26 +0100)]
Remove manual RPATH settings
- RPATH are set in the main CMakeLists.txt by this line:
SET(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE)
Vivien Delmon [Mon, 4 Mar 2013 15:03:11 +0000 (16:03 +0100)]
Add a nightly option to allow install of both vv and vv-nightly
Vivien Delmon [Mon, 4 Mar 2013 14:52:20 +0000 (15:52 +0100)]
Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk
Vivien Delmon [Mon, 4 Mar 2013 14:51:41 +0000 (15:51 +0100)]
Add -no-glib to qt flags
Simon Rit [Mon, 4 Mar 2013 06:43:22 +0000 (07:43 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Mon, 4 Mar 2013 06:41:53 +0000 (07:41 +0100)]
Rolled back to middle slice on first load
Simon Rit [Sat, 2 Mar 2013 15:18:25 +0000 (16:18 +0100)]
Rolled back default tab to images
Benoît Presles [Wed, 27 Feb 2013 17:52:30 +0000 (18:52 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Vivien Delmon [Wed, 27 Feb 2013 14:51:50 +0000 (15:51 +0100)]
Add a way to deactivate libstatgrab when installed.
Benoît Presles [Tue, 26 Feb 2013 17:45:03 +0000 (18:45 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Tue, 26 Feb 2013 14:28:12 +0000 (15:28 +0100)]
Revert "new tool: clitkDicomRTDose2Image"
This reverts commit
9c1d9afdf7f7f89aecc989b0a159d22a3745cfe2.
Romulo Pinho [Tue, 26 Feb 2013 14:24:20 +0000 (15:24 +0100)]
corrected RTDOSE I/O with GDCM 2.x
Romulo Pinho [Tue, 26 Feb 2013 10:51:04 +0000 (11:51 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
rblanc [Tue, 26 Feb 2013 09:40:52 +0000 (10:40 +0100)]
updated experimental fusion sequence visualization mode to enable temporal linking
Romulo Pinho [Tue, 26 Feb 2013 09:07:56 +0000 (10:07 +0100)]
new tool: clitkDicomRTDose2Image
- takes into account the scale factor not used by clitkDicom2Image
Benoît Presles [Mon, 25 Feb 2013 16:51:59 +0000 (17:51 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Vivien Delmon [Mon, 25 Feb 2013 16:50:19 +0000 (17:50 +0100)]
Patch ggo doc
Vivien Delmon [Mon, 25 Feb 2013 16:49:37 +0000 (17:49 +0100)]
Patch ggo doc
Vivien Delmon [Mon, 25 Feb 2013 16:47:56 +0000 (17:47 +0100)]
Add svl to supported image types
Vivien Delmon [Mon, 25 Feb 2013 16:35:08 +0000 (17:35 +0100)]
New tool to keep points in a mask
Vivien Delmon [Mon, 25 Feb 2013 16:34:46 +0000 (17:34 +0100)]
Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk
Vivien Delmon [Mon, 25 Feb 2013 16:32:34 +0000 (17:32 +0100)]
Conflict GDCM / private feature
- Unregister GDCM and register it after clitk readers so it's called
after private features
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add setRadius option
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
In SliceBySliceSetBackgroundFromLineSeparation add keepIfEqual option
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove debug message
Benoît Presles [Mon, 18 Feb 2013 08:41:57 +0000 (09:41 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Wed, 13 Feb 2013 15:47:52 +0000 (16:47 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Wed, 13 Feb 2013 15:24:00 +0000 (16:24 +0100)]
Portability issue: two files had the same names except for the case
Romulo Pinho [Wed, 13 Feb 2013 12:30:35 +0000 (13:30 +0100)]
allows negative values in VV's image/scalar arithm tool
Benoît Presles [Mon, 11 Feb 2013 08:51:15 +0000 (09:51 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Mon, 11 Feb 2013 06:51:50 +0000 (07:51 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Fri, 8 Feb 2013 12:21:14 +0000 (13:21 +0100)]
clitkDicomRTStruct2Image: small correction in help message
Romulo Pinho [Fri, 8 Feb 2013 12:13:13 +0000 (13:13 +0100)]
clitkDicomRTStruct2Image: new features
- support conversion given ROI name or substring
Romulo Pinho [Tue, 5 Feb 2013 00:10:15 +0000 (01:10 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Tue, 5 Feb 2013 00:05:52 +0000 (01:05 +0100)]
addition of verbose messages
Romulo Pinho [Tue, 5 Feb 2013 00:03:56 +0000 (01:03 +0100)]
removing debug messages
Benoît Presles [Mon, 4 Feb 2013 18:22:31 +0000 (19:22 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 1 Feb 2013 16:00:35 +0000 (17:00 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Pierre Gueth [Fri, 1 Feb 2013 15:29:52 +0000 (16:29 +0100)]
fixed root cmake lookup
Simon Rit [Fri, 1 Feb 2013 08:11:06 +0000 (09:11 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Conflicts:
vv/vvSlicer.cxx
Simon Rit [Fri, 1 Feb 2013 07:45:30 +0000 (08:45 +0100)]
Changes rounding to nearest slice with a comment to explain that the
slice might never be visible (bug #1883).
Simon Rit [Fri, 1 Feb 2013 07:45:30 +0000 (08:45 +0100)]
Rolled back to previous rounding to reslice overlay/fusion.
David Sarrut [Fri, 1 Feb 2013 06:59:30 +0000 (07:59 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Thu, 31 Jan 2013 22:12:33 +0000 (23:12 +0100)]
VectorArithm: make Norm(0) = 0
Romulo Pinho [Thu, 31 Jan 2013 15:27:16 +0000 (16:27 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Thu, 31 Jan 2013 15:26:19 +0000 (16:26 +0100)]
support different series in a single dicom folder in Dicom2Image
Romulo Pinho [Thu, 31 Jan 2013 15:23:41 +0000 (16:23 +0100)]
added clitkVectorArithm tool (correction in commit)
- removed all vector support from clitkImageArithm
git://git.creatis.insa-lyon.fr / clitk.git / log