]> Creatis software - clitk.git/log
clitk.git
7 years agoTravis cache debug (vtk)
tbaudier [Thu, 3 Aug 2017 07:31:34 +0000 (09:31 +0200)]
Travis cache debug (vtk)

7 years agoTravis cache debug (vtk)
tbaudier [Thu, 3 Aug 2017 07:15:13 +0000 (09:15 +0200)]
Travis cache debug (vtk)

7 years agoAdd clitkPartitionEnergyWindowDicom tool
tbaudier [Tue, 1 Aug 2017 14:52:26 +0000 (16:52 +0200)]
Add clitkPartitionEnergyWindowDicom tool

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Tue, 1 Aug 2017 13:34:41 +0000 (15:34 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoAdd option to variance with only one number
tbaudier [Tue, 1 Aug 2017 13:34:10 +0000 (15:34 +0200)]
Add option to variance with only one number

7 years agoadapt power merge for osx
David Sarrut [Wed, 26 Jul 2017 06:56:51 +0000 (08:56 +0200)]
adapt power merge for osx

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Wed, 26 Jul 2017 06:13:15 +0000 (08:13 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoadapt to osx
David Sarrut [Wed, 26 Jul 2017 06:12:50 +0000 (08:12 +0200)]
adapt to osx

7 years agoImage Orientation with Dicom debug
tbaudier [Mon, 24 Jul 2017 12:28:34 +0000 (14:28 +0200)]
Image Orientation with Dicom debug

7 years agoDebug hdr condition in gate_power_merge.sh
tbaudier [Fri, 23 Jun 2017 08:39:29 +0000 (10:39 +0200)]
Debug hdr condition in gate_power_merge.sh

7 years agoDebug RTStruct offset in z direction with vtk6 (next part)
tbaudier [Wed, 14 Jun 2017 14:40:03 +0000 (16:40 +0200)]
Debug RTStruct offset in z direction with vtk6 (next part)

7 years agoSeparate term to term multiplication and dotproduct with VectorArithm
tbaudier [Mon, 12 Jun 2017 13:04:35 +0000 (15:04 +0200)]
Separate term to term multiplication and dotproduct with VectorArithm

7 years agoRemove warning with VTK7.1
tbaudier [Fri, 9 Jun 2017 14:57:50 +0000 (16:57 +0200)]
Remove warning with VTK7.1

7 years agoenglish mistake
tbaudier [Fri, 9 Jun 2017 14:55:19 +0000 (16:55 +0200)]
english mistake

7 years agoCorrect sorting order in MaskOfIntegratedIntensity tool
tbaudier [Wed, 7 Jun 2017 14:51:41 +0000 (16:51 +0200)]
Correct sorting order in MaskOfIntegratedIntensity tool

7 years agoDebug clitkMaskOfIntegratedIntensityGenericFilter to avoid c++11
tbaudier [Tue, 6 Jun 2017 08:16:18 +0000 (10:16 +0200)]
Debug clitkMaskOfIntegratedIntensityGenericFilter to avoid c++11

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Tue, 6 Jun 2017 06:49:10 +0000 (08:49 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoadd tool to compute MaskOfIntegratedIntensity
David Sarrut [Fri, 2 Jun 2017 11:04:12 +0000 (13:04 +0200)]
add tool to compute MaskOfIntegratedIntensity

7 years agoremove warning
David Sarrut [Fri, 2 Jun 2017 11:03:53 +0000 (13:03 +0200)]
remove warning

7 years agoDebug previous commit with correct include
tbaudier [Thu, 1 Jun 2017 13:38:08 +0000 (15:38 +0200)]
Debug previous commit with correct include

7 years agoAdd clitkImage2DicomDose tool
tbaudier [Thu, 1 Jun 2017 13:25:52 +0000 (15:25 +0200)]
Add clitkImage2DicomDose tool

7 years agoclean useless variables
tbaudier [Thu, 1 Jun 2017 13:25:22 +0000 (15:25 +0200)]
clean useless variables

7 years agoMerge branch 'master' of https://github.com/open-vv/vv
tbaudier [Tue, 23 May 2017 15:00:03 +0000 (17:00 +0200)]
Merge branch 'master' of https://github.com/open-vv/vv

7 years agoDebug RTStruct offset in z direction with vtk6
tbaudier [Tue, 23 May 2017 14:45:05 +0000 (16:45 +0200)]
Debug RTStruct offset in z direction with vtk6

7 years agoRead mhd information and write dicom sequence about energy
tbaudier [Tue, 23 May 2017 14:10:41 +0000 (16:10 +0200)]
Read mhd information and write dicom sequence about energy

7 years agoAdd code to write dicom sequence tag in gateSimulation2Dicom
tbaudier [Fri, 19 May 2017 15:04:29 +0000 (17:04 +0200)]
Add code to write dicom sequence tag in gateSimulation2Dicom

7 years agoToward write sequence dicom tags
tbaudier [Thu, 18 May 2017 15:19:54 +0000 (17:19 +0200)]
Toward write sequence dicom tags

7 years agoUpdate GateSimulation2Dicom tool with test functions
tbaudier [Wed, 17 May 2017 14:54:57 +0000 (16:54 +0200)]
Update GateSimulation2Dicom tool with test functions

7 years agoclean clitkGateSimulation2DicomGenericFilter
tbaudier [Mon, 15 May 2017 15:43:41 +0000 (17:43 +0200)]
clean clitkGateSimulation2DicomGenericFilter

7 years agoRemove unapplicable clitk tool in CMakeLists
tbaudier [Mon, 15 May 2017 14:26:21 +0000 (16:26 +0200)]
Remove unapplicable clitk tool in CMakeLists

7 years agoAdd GateSimulation2Dicom tool
tbaudier [Mon, 15 May 2017 13:33:00 +0000 (15:33 +0200)]
Add GateSimulation2Dicom tool

7 years agoAdd binaries to the readme.md
tbaudier [Tue, 9 May 2017 08:16:00 +0000 (10:16 +0200)]
Add binaries to the readme.md

7 years agoUpdate clitkProfileImage Tool
tbaudier [Tue, 9 May 2017 08:03:43 +0000 (10:03 +0200)]
Update clitkProfileImage Tool
Add output to the tool (like with the GUI)
Change the first and second input to vox (correct now)

7 years agoAdd clitkCommon to include ITK_OVERVIEW for older ITK versions
tbaudier [Thu, 27 Apr 2017 08:01:58 +0000 (10:01 +0200)]
Add clitkCommon to include ITK_OVERVIEW for older ITK versions

7 years agoDefine ITK_OVERRIDE for itk 4.5
tbaudier [Wed, 26 Apr 2017 15:35:07 +0000 (17:35 +0200)]
Define ITK_OVERRIDE for itk 4.5

7 years agoRemove warnings with c++11
tbaudier [Wed, 26 Apr 2017 13:18:01 +0000 (15:18 +0200)]
Remove warnings with c++11

7 years agoDebug c++11
tbaudier [Wed, 26 Apr 2017 12:21:48 +0000 (14:21 +0200)]
Debug c++11

7 years agoTowards c++11
tbaudier [Wed, 26 Apr 2017 11:53:15 +0000 (13:53 +0200)]
Towards c++11
Remove bugs and warnings

7 years agoTravis: towards c++11 with vv
tbaudier [Wed, 26 Apr 2017 08:20:10 +0000 (10:20 +0200)]
Travis: towards c++11 with vv

7 years agoRamove warnings with C++11
tbaudier [Wed, 26 Apr 2017 08:08:11 +0000 (10:08 +0200)]
Ramove warnings with C++11
Add ITK_OVERRIDE

7 years agoTravis: toward c++11 with itk
tbaudier [Tue, 25 Apr 2017 15:05:44 +0000 (17:05 +0200)]
Travis: toward c++11 with itk

7 years agoTravis: Toward c++11 with vtk
tbaudier [Tue, 25 Apr 2017 12:49:47 +0000 (14:49 +0200)]
Travis: Toward c++11 with vtk

7 years agoRemove warnings with travis compilators
tbaudier [Mon, 24 Apr 2017 15:13:54 +0000 (17:13 +0200)]
Remove warnings with travis compilators
gcc & clang

7 years agoupdate travis file
tbaudier [Mon, 24 Apr 2017 09:36:01 +0000 (11:36 +0200)]
update travis file

7 years agoUpdate qt4 installation for Mac on Travis
tbaudier [Fri, 21 Apr 2017 07:22:32 +0000 (09:22 +0200)]
Update qt4 installation for Mac on Travis

7 years agoUpdate qt4 installation for Mac on Travis
tbaudier [Fri, 21 Apr 2017 07:07:46 +0000 (09:07 +0200)]
Update qt4 installation for Mac on Travis

7 years agoChange auto_ptr to shared_ptr with c++11
tbaudier [Thu, 20 Apr 2017 14:25:20 +0000 (16:25 +0200)]
Change auto_ptr to shared_ptr with c++11
Avoid warnings

7 years agoRemove warnings
tbaudier [Thu, 20 Apr 2017 13:37:38 +0000 (15:37 +0200)]
Remove warnings
Change QtDesigner/QDesignerExportWidget to QtUiPlugin/QDesignerExportWidget

7 years agoAdd BSpline order consideration in clitkConvertBLUTCoeffsToVFFilter
tbaudier [Wed, 29 Mar 2017 10:44:57 +0000 (12:44 +0200)]
Add BSpline order consideration in clitkConvertBLUTCoeffsToVFFilter

7 years agoAdded --noniimeta option to cancel metadata changes with nifti file
Simon Rit [Tue, 28 Mar 2017 19:12:10 +0000 (21:12 +0200)]
Added --noniimeta option to cancel metadata changes with nifti file
format

7 years agoDebug clitkConvertBLUTCoeffsToVFFilter with ITK > v4.6
tbaudier [Thu, 23 Mar 2017 15:20:15 +0000 (16:20 +0100)]
Debug clitkConvertBLUTCoeffsToVFFilter with ITK > v4.6

7 years agoTake into account directions into clitk warp tool
tbaudier [Tue, 21 Mar 2017 16:24:44 +0000 (17:24 +0100)]
Take into account directions into clitk warp tool

7 years agoTaking into account VF Transform
tbaudier [Tue, 21 Mar 2017 13:45:35 +0000 (14:45 +0100)]
Taking into account VF Transform

7 years agoAdd gate_job_ccin2p3.job to installed cluster tools
tbaudier [Fri, 17 Mar 2017 15:49:30 +0000 (16:49 +0100)]
Add gate_job_ccin2p3.job to installed cluster tools

7 years agoWith clitkImageCreate, copy the transformMatrix of the mhd file
tbaudier [Thu, 16 Mar 2017 14:48:54 +0000 (15:48 +0100)]
With clitkImageCreate, copy the transformMatrix of the mhd file

7 years agoCopy the orientation matrix for clitkSplitImage
tbaudier [Thu, 16 Mar 2017 13:33:39 +0000 (14:33 +0100)]
Copy the orientation matrix for clitkSplitImage
For 4D Images and a splitting along the time (last) dimension only

7 years agoAdd more decimals for Window/Level spin boxes
tbaudier [Wed, 15 Mar 2017 15:55:08 +0000 (16:55 +0100)]
Add more decimals for Window/Level spin boxes

7 years agoChange the notation style in the fusion legend bar
tbaudier [Wed, 15 Mar 2017 15:17:09 +0000 (16:17 +0100)]
Change the notation style in the fusion legend bar

7 years agoDebug libstatgrab
tbaudier [Tue, 14 Mar 2017 16:31:16 +0000 (17:31 +0100)]
Debug libstatgrab
With previous commits, we have to use libstatgrab version >=0.90 now

7 years agoAdd flag for clitk memory usage
tbaudier [Fri, 10 Mar 2017 13:33:29 +0000 (14:33 +0100)]
Add flag for clitk memory usage

7 years agochange int to size_t
David Sarrut [Fri, 10 Mar 2017 12:13:40 +0000 (13:13 +0100)]
change int to size_t

7 years agoprevent the use of the superbuild (to remove ?)
David Sarrut [Fri, 10 Mar 2017 12:13:19 +0000 (13:13 +0100)]
prevent the use of the superbuild (to remove ?)

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 10 Mar 2017 09:32:46 +0000 (10:32 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoBe sure to have memory consuption in kB, MB, GB instead of kibibytes, ...
tbaudier [Wed, 1 Mar 2017 15:50:59 +0000 (16:50 +0100)]
Be sure to have memory consuption in kB, MB, GB instead of kibibytes, ...

7 years agoWrite B instead of b for Bytes
tbaudier [Wed, 1 Mar 2017 08:04:03 +0000 (09:04 +0100)]
Write B instead of b for Bytes

7 years agoUndo commit 10a10f801f12d2cea51dd564a67003971ad66269
tbaudier [Tue, 28 Feb 2017 15:45:30 +0000 (16:45 +0100)]
Undo commit 10a10f801f12d2cea51dd564a67003971ad66269
Memory consuption ok now

7 years agoUncomment libstatgrab dependency
tbaudier [Tue, 28 Feb 2017 15:43:49 +0000 (16:43 +0100)]
Uncomment libstatgrab dependency

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Tue, 21 Feb 2017 07:31:49 +0000 (08:31 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoMerge branch 'histogramme'
tbaudier [Mon, 20 Feb 2017 15:55:00 +0000 (16:55 +0100)]
Merge branch 'histogramme'

7 years agoAdd interactions with window/level bars in the histogram tool
tbaudier [Mon, 20 Feb 2017 15:52:52 +0000 (16:52 +0100)]
Add interactions with window/level bars in the histogram tool

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 17 Feb 2017 06:58:34 +0000 (07:58 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years ago Copy transform matrix for NVector Image in vv
tbaudier [Thu, 16 Feb 2017 16:17:51 +0000 (17:17 +0100)]
 Copy transform matrix for NVector Image in vv

7 years agoCopy transform matrix in clitk4DImageToNVectorImage tool
tbaudier [Thu, 16 Feb 2017 10:34:38 +0000 (11:34 +0100)]
Copy transform matrix in clitk4DImageToNVectorImage tool

7 years agoCopy transform matrix in clitkNVectorImageTo4DImage tool
tbaudier [Thu, 16 Feb 2017 10:24:32 +0000 (11:24 +0100)]
Copy transform matrix in clitkNVectorImageTo4DImage tool

7 years agoAdd window/level lines in histogram tool
tbaudier [Wed, 15 Feb 2017 16:09:34 +0000 (17:09 +0100)]
Add window/level lines in histogram tool

7 years agochange Qt5 travis path
tbaudier [Mon, 13 Feb 2017 08:46:11 +0000 (09:46 +0100)]
change Qt5 travis path

7 years agoMerge branch 'master' of https://github.com/open-vv/vv
tbaudier [Fri, 10 Feb 2017 15:17:09 +0000 (16:17 +0100)]
Merge branch 'master' of https://github.com/open-vv/vv

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Fri, 10 Feb 2017 15:14:29 +0000 (16:14 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoAdd histogram tool
tbaudier [Fri, 10 Feb 2017 15:13:21 +0000 (16:13 +0100)]
Add histogram tool

7 years agoClean up of David's commits
Simon Rit [Thu, 9 Feb 2017 14:28:54 +0000 (15:28 +0100)]
Clean up of David's commits

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Thu, 9 Feb 2017 10:21:15 +0000 (11:21 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoMerge branch 'master' of https://github.com/open-vv/vv
David Sarrut [Thu, 9 Feb 2017 09:27:19 +0000 (10:27 +0100)]
Merge branch 'master' of https://github.com/open-vv/vv

7 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Thu, 9 Feb 2017 09:24:09 +0000 (10:24 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

7 years agoreplace remote rsync with local
David Sarrut [Thu, 9 Feb 2017 09:13:38 +0000 (10:13 +0100)]
replace remote rsync with local

7 years agoallow to merge hdr also
David Sarrut [Thu, 9 Feb 2017 09:09:17 +0000 (10:09 +0100)]
allow to merge hdr also

7 years agochange path to usr/local + sps option
David Sarrut [Thu, 9 Feb 2017 09:08:34 +0000 (10:08 +0100)]
change path to usr/local + sps option

7 years agoTravis: Change Qt5 version
tbaudier [Thu, 26 Jan 2017 09:18:55 +0000 (10:18 +0100)]
Travis: Change Qt5 version
Force to use Qt5.5.1 instead of the updated brew formula

7 years agoSave correct landmarks coordinates with transformation
tbaudier [Wed, 25 Jan 2017 11:01:22 +0000 (12:01 +0100)]
Save correct landmarks coordinates with transformation

7 years agoUpdate Landmark coordinates with transformation matrix
tbaudier [Tue, 24 Jan 2017 14:59:06 +0000 (15:59 +0100)]
Update Landmark coordinates with transformation matrix

7 years agobuild vv with travis
tbaudier [Tue, 24 Jan 2017 07:42:08 +0000 (08:42 +0100)]
build vv with travis

7 years agoIncrease cache timeout for travis
tbaudier [Mon, 23 Jan 2017 15:44:21 +0000 (16:44 +0100)]
Increase cache timeout for travis

7 years agocompile vv with travis
tbaudier [Mon, 23 Jan 2017 14:26:06 +0000 (15:26 +0100)]
compile vv with travis

7 years agoBuild itk in travis
tbaudier [Mon, 23 Jan 2017 07:27:26 +0000 (08:27 +0100)]
Build itk in travis

7 years agotravis build vtk
tbaudier [Fri, 20 Jan 2017 13:41:00 +0000 (14:41 +0100)]
travis build vtk

7 years agoChange cmake flags vot VTK5.10 in travis file
tbaudier [Fri, 20 Jan 2017 12:51:07 +0000 (13:51 +0100)]
Change cmake flags vot VTK5.10 in travis file

7 years agojust build vv with travis
tbaudier [Fri, 20 Jan 2017 11:00:17 +0000 (12:00 +0100)]
just build vv with travis
without tools
in order to save time

7 years agobuild vv for travis
tbaudier [Thu, 19 Jan 2017 15:13:07 +0000 (16:13 +0100)]
build vv for travis

7 years agoForce gdcm to find spacing
tbaudier [Thu, 19 Jan 2017 14:47:37 +0000 (15:47 +0100)]
Force gdcm to find spacing
Used with preclinical CT image to find the z-spacing

7 years agoAdd itk in travis
tbaudier [Thu, 19 Jan 2017 08:06:23 +0000 (09:06 +0100)]
Add itk in travis
Add travis logo in README.md

7 years agochange vtk version 6.0 to 5.10
tbaudier [Wed, 18 Jan 2017 10:26:26 +0000 (11:26 +0100)]
change vtk version 6.0 to 5.10