]> Creatis software - clitk.git/log
clitk.git
11 years agoAllow to retrieve and display multiple series.
cervenansky [Fri, 26 Jul 2013 14:45:39 +0000 (16:45 +0200)]
Allow to retrieve and display multiple series.
Temporary storage directory in settings.

11 years agoSort series under Linux
Simon Rit [Fri, 26 Jul 2013 10:50:07 +0000 (12:50 +0200)]
Sort series under Linux

11 years agoMerge branch 'master' into PacsConnection
Simon Rit [Fri, 26 Jul 2013 07:56:24 +0000 (09:56 +0200)]
Merge branch 'master' into PacsConnection

11 years agoMerge branch 'master' into PacsConnection
Simon Rit [Fri, 26 Jul 2013 07:55:28 +0000 (09:55 +0200)]
Merge branch 'master' into PacsConnection

11 years agoAdd tool_install for clitkMergeRootFiles & clitkMergeAsciiDoseActor
David Sarrut [Fri, 26 Jul 2013 06:52:03 +0000 (08:52 +0200)]
Add tool_install for clitkMergeRootFiles & clitkMergeAsciiDoseActor

11 years agoAdd clitkMergeRootFiles
David Sarrut [Fri, 26 Jul 2013 06:47:54 +0000 (08:47 +0200)]
Add clitkMergeRootFiles

11 years agoMoved from repository clitk.private to tools
David Sarrut [Fri, 26 Jul 2013 06:44:39 +0000 (08:44 +0200)]
Moved from repository clitk.private to tools

11 years agomerger works when files are ordered
Pierre Gueth [Thu, 7 Feb 2013 14:35:00 +0000 (15:35 +0100)]
merger works when files are ordered

11 years agoswitched to gjm merger for pet
Pierre Gueth [Thu, 7 Feb 2013 14:01:20 +0000 (15:01 +0100)]
switched to gjm merger for pet

11 years agocopied gatemergemanager from gate-creatis
Pierre Gueth [Thu, 7 Feb 2013 13:37:24 +0000 (14:37 +0100)]
copied gatemergemanager from gate-creatis

11 years agomv file
David Sarrut [Fri, 26 Jul 2013 06:43:32 +0000 (08:43 +0200)]
mv file

11 years agoremove files
David Sarrut [Fri, 26 Jul 2013 06:43:19 +0000 (08:43 +0200)]
remove files

11 years agoMoved from repository clitk.private to tools
David Sarrut [Fri, 26 Jul 2013 06:33:53 +0000 (08:33 +0200)]
Moved from repository clitk.private to tools

11 years agopet merger seams to work
Pierre Gueth [Thu, 7 Feb 2013 15:03:32 +0000 (16:03 +0100)]
pet merger seams to work

11 years agomerger works when files are ordered
Pierre Gueth [Thu, 7 Feb 2013 14:35:00 +0000 (15:35 +0100)]
merger works when files are ordered

11 years agoswitched to gjm merger for pet
Pierre Gueth [Thu, 7 Feb 2013 14:01:20 +0000 (15:01 +0100)]
switched to gjm merger for pet

11 years agomore root merger
Pierre Gueth [Thu, 7 Feb 2013 13:17:09 +0000 (14:17 +0100)]
more root merger

11 years agovariable name set
Pierre Gueth [Mon, 4 Feb 2013 12:18:11 +0000 (13:18 +0100)]
variable name set

11 years agopet output detection
Pierre Gueth [Fri, 1 Feb 2013 15:39:35 +0000 (16:39 +0100)]
pet output detection

11 years agofixed clitkMergeRootFiles build
Pierre Gueth [Fri, 1 Feb 2013 15:31:19 +0000 (16:31 +0100)]
fixed clitkMergeRootFiles build

11 years agoTVirtualPlugin fix for non x system
gueth [Fri, 20 May 2011 14:44:49 +0000 (14:44 +0000)]
TVirtualPlugin fix for non x system

11 years ago- merger for gate
dsarrut [Tue, 30 Mar 2010 14:04:01 +0000 (14:04 +0000)]
- merger for gate

11 years agoAdd clitkMergeAsciiDoseActor
David Sarrut [Fri, 26 Jul 2013 06:24:56 +0000 (08:24 +0200)]
Add clitkMergeAsciiDoseActor

11 years agoMoved from repository clitk.private to tools
David Sarrut [Fri, 26 Jul 2013 06:20:58 +0000 (08:20 +0200)]
Moved from repository clitk.private to tools

11 years ago- merger for gate
dsarrut [Tue, 30 Mar 2010 14:04:01 +0000 (14:04 +0000)]
- merger for gate

11 years agoFix compile issue (add include <iterator>)
David Sarrut [Fri, 26 Jul 2013 06:18:16 +0000 (08:18 +0200)]
Fix compile issue (add include <iterator>)

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 26 Jul 2013 05:56:17 +0000 (07:56 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Thu, 25 Jul 2013 15:31:03 +0000 (17:31 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Thu, 25 Jul 2013 12:04:17 +0000 (14:04 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoAdd to superbuild gdcm and option clitk registration, segmentation and tools.
Agata Krason [Thu, 25 Jul 2013 11:02:17 +0000 (13:02 +0200)]
Add to superbuild gdcm and  option clitk registration, segmentation and tools.

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Thu, 25 Jul 2013 09:32:39 +0000 (11:32 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoTool to inverse a matrix
Simon Rit [Thu, 25 Jul 2013 08:51:23 +0000 (10:51 +0200)]
Tool to inverse a matrix

11 years agoMove matrix to string conversion to common library
Simon Rit [Thu, 25 Jul 2013 08:50:04 +0000 (10:50 +0200)]
Move matrix to string conversion to common library

11 years agoAdd to VV superbuild gdcm option.
Agata Krason [Thu, 25 Jul 2013 07:25:20 +0000 (09:25 +0200)]
Add to VV superbuild gdcm option.

11 years agoAllow reading .elx file for rigid transformations, i.e. the result of
Simon Rit [Wed, 24 Jul 2013 22:06:59 +0000 (00:06 +0200)]
Allow reading .elx file for rigid transformations, i.e. the result of
Elastix' registration.

11 years agoUsed euler3DTransform instead of CenteredEulerTransform. Similar result
Simon Rit [Wed, 24 Jul 2013 22:04:34 +0000 (00:04 +0200)]
Used euler3DTransform instead of CenteredEulerTransform. Similar result
but more consistent with Elastix.

11 years agoAdd define to avoir vtk warning on mac
David Sarrut [Wed, 24 Jul 2013 15:05:51 +0000 (17:05 +0200)]
Add define to avoir vtk warning on mac

11 years agoAdd define to avoid vtk warning on mac
David Sarrut [Wed, 24 Jul 2013 15:05:26 +0000 (17:05 +0200)]
Add define to avoid vtk warning on mac

11 years agoGo from matrix to elastix file
Simon Rit [Wed, 24 Jul 2013 15:04:09 +0000 (17:04 +0200)]
Go from matrix to elastix file

11 years agoWhen resampling, keeping the same origin seems wrong because the origin
Simon Rit [Wed, 24 Jul 2013 11:29:54 +0000 (13:29 +0200)]
When resampling, keeping the same origin seems wrong because the origin
is not the corner of the image but the center of the first pixel

11 years agoMoved Elastix stuff to a separate file
Simon Rit [Wed, 24 Jul 2013 11:26:03 +0000 (13:26 +0200)]
Moved Elastix stuff to a separate file

11 years agoAdded missing include
Simon Rit [Wed, 24 Jul 2013 09:50:03 +0000 (11:50 +0200)]
Added missing include

11 years agoMerge branch 'PacsConnection' of ssh://git.creatis.insa-lyon.fr/clitk into PacsConnection
cervenansky [Wed, 24 Jul 2013 09:25:56 +0000 (11:25 +0200)]
Merge branch 'PacsConnection' of ssh://git.creatis.insa-lyon.fr/clitk into PacsConnection

11 years agosort files in lexicographical order
cervenansky [Wed, 24 Jul 2013 09:23:13 +0000 (11:23 +0200)]
sort files in lexicographical order

11 years agoMerge branch 'master' into PacsConnection
Simon Rit [Tue, 23 Jul 2013 09:42:53 +0000 (11:42 +0200)]
Merge branch 'master' into PacsConnection

11 years agoFixes for linux compilation
Simon Rit [Tue, 23 Jul 2013 09:25:12 +0000 (11:25 +0200)]
Fixes for linux compilation

11 years agoAdd clitkDice tool
David Sarrut [Mon, 22 Jul 2013 13:04:10 +0000 (15:04 +0200)]
Add clitkDice tool

11 years agoSet clitkDice tool into public repo
David Sarrut [Mon, 22 Jul 2013 13:01:46 +0000 (15:01 +0200)]
Set clitkDice tool into public repo

11 years agoUpdated dice tool
David Sarrut [Mon, 22 Jul 2013 12:57:05 +0000 (14:57 +0200)]
Updated dice tool

11 years agoCompatibility
David Sarrut [Thu, 24 Jan 2013 06:53:55 +0000 (07:53 +0100)]
Compatibility

11 years agoMoved from repository clitk to clitk.private/tests_dav
David Sarrut [Fri, 3 Feb 2012 07:13:51 +0000 (08:13 +0100)]
Moved from repository clitk to clitk.private/tests_dav

11 years agoUpdated version with new itk filter
David Sarrut [Mon, 22 Jul 2013 12:56:33 +0000 (14:56 +0200)]
Updated version with new itk filter

11 years agoRemove itk filter which is now inside itk
David Sarrut [Mon, 22 Jul 2013 12:10:26 +0000 (14:10 +0200)]
Remove itk filter which is now inside itk

11 years agoAdd missing clitkElastixTransformToMatrix
David Sarrut [Fri, 19 Jul 2013 07:54:06 +0000 (09:54 +0200)]
Add missing clitkElastixTransformToMatrix

11 years agoAdd missing clitkElastixTransformToMatrix
David Sarrut [Fri, 19 Jul 2013 07:53:55 +0000 (09:53 +0200)]
Add missing clitkElastixTransformToMatrix

11 years agoFirst version to submit jobs on a single multithread machine (if no qsub command...
David Sarrut [Thu, 18 Jul 2013 09:15:11 +0000 (11:15 +0200)]
First version to submit jobs on a single multithread machine (if no qsub command exist)

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Thu, 18 Jul 2013 08:52:25 +0000 (10:52 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoChange the default fgate name to gate
David Sarrut [Thu, 18 Jul 2013 06:39:27 +0000 (08:39 +0200)]
Change the default fgate name to gate

11 years agoclean move directory
cervenansky [Wed, 17 Jul 2013 21:44:20 +0000 (23:44 +0200)]
clean move directory

11 years agoadd move directory to store dicom files
cervenansky [Wed, 17 Jul 2013 16:44:45 +0000 (18:44 +0200)]
add move directory to store dicom files

11 years agoAdd needed merger for stat file (python)
David Sarrut [Wed, 17 Jul 2013 14:44:37 +0000 (16:44 +0200)]
Add needed merger for stat file (python)

11 years agoadd move a single image
cervenansky [Wed, 17 Jul 2013 14:26:11 +0000 (16:26 +0200)]
add move a single image

11 years agoput queries in Factory
cervenansky [Wed, 17 Jul 2013 09:03:38 +0000 (11:03 +0200)]
put queries in Factory

11 years agoclean
cervenansky [Wed, 17 Jul 2013 08:05:36 +0000 (10:05 +0200)]
clean

11 years agoadd cmove for all levels
cervenansky [Wed, 17 Jul 2013 07:25:01 +0000 (09:25 +0200)]
add cmove for all levels

11 years agosimplify query/retrieve calls
cervenansky [Tue, 16 Jul 2013 10:08:50 +0000 (12:08 +0200)]
simplify query/retrieve calls

11 years agocleanup
cervenansky [Mon, 15 Jul 2013 12:45:33 +0000 (14:45 +0200)]
cleanup

11 years agoAdd patient ID and patient name search available.
cervenansky [Mon, 15 Jul 2013 12:36:37 +0000 (14:36 +0200)]
Add patient ID and patient name search available.

11 years agoset VV Dicom client parameter
cervenansky [Mon, 15 Jul 2013 08:51:02 +0000 (10:51 +0200)]
set VV Dicom client parameter

11 years agomove works for patient retrieve.
cervenansky [Fri, 12 Jul 2013 14:07:11 +0000 (16:07 +0200)]
move works for patient retrieve.
Need to work around to smooth things.

11 years agoset bc scale by default to 30 decimals in mergeDosePerEnergy
Marc Vila-Oliva [Thu, 11 Jul 2013 13:01:22 +0000 (15:01 +0200)]
set bc scale by default to 30 decimals in mergeDosePerEnergy

11 years agoremove double patients in PatientTree
cervenansky [Tue, 9 Jul 2013 09:26:58 +0000 (11:26 +0200)]
remove double patients in PatientTree

11 years agomodify settings save
cervenansky [Tue, 9 Jul 2013 09:14:19 +0000 (11:14 +0200)]
modify settings save

11 years agoUpdate README.md
dsarrut [Mon, 8 Jul 2013 09:15:40 +0000 (11:15 +0200)]
Update README.md

11 years agoCreate README.md
dsarrut [Mon, 8 Jul 2013 09:14:54 +0000 (11:14 +0200)]
Create README.md

11 years agoAdd tool to convert Elastix param into matrix file
David Sarrut [Mon, 8 Jul 2013 09:01:00 +0000 (11:01 +0200)]
Add tool to convert Elastix param into matrix file

11 years agopacs only if clitk_use_system_gdcm is defined
cervenansky [Fri, 5 Jul 2013 15:20:49 +0000 (17:20 +0200)]
pacs only if clitk_use_system_gdcm is defined

11 years agoAdd pacs classes
cervenansky [Fri, 5 Jul 2013 14:27:40 +0000 (16:27 +0200)]
Add pacs classes

11 years agoon_importData
cervenansky [Fri, 5 Jul 2013 14:21:40 +0000 (16:21 +0200)]
on_importData

11 years agoImagesModel correction
cervenansky [Fri, 5 Jul 2013 12:44:30 +0000 (14:44 +0200)]
ImagesModel correction

11 years agoSettings dialog to add new dicom server
cervenansky [Fri, 5 Jul 2013 12:19:47 +0000 (14:19 +0200)]
Settings dialog to add new dicom server

11 years agoDicom server connection
cervenansky [Fri, 5 Jul 2013 12:18:43 +0000 (14:18 +0200)]
Dicom server connection

11 years agoRolled back to Pierre's version of stat merger
Simon Rit [Fri, 5 Jul 2013 07:18:39 +0000 (09:18 +0200)]
Rolled back to Pierre's version of stat merger

11 years agomerge details
Pierre Gueth [Thu, 24 Jan 2013 13:09:59 +0000 (14:09 +0100)]
merge details

11 years agoadded hdr image to power_merge
Pierre Gueth [Wed, 1 Jun 2011 13:48:43 +0000 (15:48 +0200)]
added hdr image to power_merge

11 years agomerging
Pierre Gueth [Fri, 20 May 2011 13:53:38 +0000 (15:53 +0200)]
merging

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Marc Vila-Oliva [Thu, 4 Jul 2013 17:38:57 +0000 (19:38 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agonew script for merging dose per energy files
Marc Vila-Oliva [Thu, 4 Jul 2013 17:06:58 +0000 (19:06 +0200)]
new script for merging dose per energy files

11 years agoadded DosePerEnergy merger and modified filename for mergeStats
Marc Vila-Oliva [Thu, 4 Jul 2013 17:05:45 +0000 (19:05 +0200)]
added DosePerEnergy merger and modified filename for mergeStats

11 years agoMade .mat reading robust to non matrix files (e.g., Gate material files)
Simon Rit [Thu, 4 Jul 2013 16:36:54 +0000 (18:36 +0200)]
Made .mat reading robust to non matrix files (e.g., Gate material files)

11 years agoCorrected cluster job to move current output before deleting the rest of
Simon Rit [Tue, 2 Jul 2013 21:21:56 +0000 (23:21 +0200)]
Corrected cluster job to move current output before deleting the rest of
the macro files

11 years agoSeeds are now given in mm (not in pixels ; bug)
David Sarrut [Mon, 1 Jul 2013 10:00:00 +0000 (12:00 +0200)]
Seeds are now given in mm (not in pixels ; bug)

11 years agocorrections for recent version of gdcm
cervenansky [Mon, 1 Jul 2013 07:36:22 +0000 (09:36 +0200)]
corrections for recent version of gdcm

11 years agoAdd option to display series and filename
David Sarrut [Mon, 1 Jul 2013 07:00:35 +0000 (09:00 +0200)]
Add option to display series and filename

11 years agoCompile PACS stuff only if GDCM system is used
Simon Rit [Fri, 28 Jun 2013 09:03:09 +0000 (11:03 +0200)]
Compile PACS stuff only if GDCM system is used

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 28 Jun 2013 08:28:31 +0000 (10:28 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agofirst developments for PacsConnection
cervenansky [Fri, 28 Jun 2013 08:24:10 +0000 (10:24 +0200)]
first developments for PacsConnection

11 years agoAdded trap as suggested by Fabrice
Simon Rit [Thu, 27 Jun 2013 14:31:05 +0000 (16:31 +0200)]
Added trap as suggested by Fabrice

11 years agoForce 1 thread only
Simon Rit [Thu, 27 Jun 2013 14:30:42 +0000 (16:30 +0200)]
Force 1 thread only

11 years agoModified to use .bashrc settings as default
Simon Rit [Thu, 27 Jun 2013 14:25:25 +0000 (16:25 +0200)]
Modified to use .bashrc settings as default