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Creatis software - clitk.git/log
bouilhol [Mon, 22 Nov 2010 17:32:47 +0000 (17:32 +0000)]
works with the new create_mhd_4D.sh
bouilhol [Tue, 9 Nov 2010 13:52:35 +0000 (13:52 +0000)]
don't crash if ther is a "/" in the dicom field
bouilhol [Fri, 5 Nov 2010 00:04:59 +0000 (00:04 +0000)]
clitkDicomToImage added to clitk3
srit [Thu, 4 Nov 2010 18:22:44 +0000 (18:22 +0000)]
Corrected erroneous free when a real RECTILINEAR field is detected
bouilhol [Tue, 26 Oct 2010 15:25:44 +0000 (15:25 +0000)]
*** empty log message ***
bouilhol [Tue, 26 Oct 2010 14:39:05 +0000 (14:39 +0000)]
*** empty log message ***
schaerer [Tue, 26 Oct 2010 13:43:54 +0000 (13:43 +0000)]
temporal median of a sequence of images, to be used for the mid P project
schaerer [Tue, 26 Oct 2010 12:37:54 +0000 (12:37 +0000)]
MIP tool using David's framework
srit [Mon, 25 Oct 2010 16:27:49 +0000 (16:27 +0000)]
Removed warning
srit [Mon, 25 Oct 2010 16:21:29 +0000 (16:21 +0000)]
Removed vc2010 warnings
schaerer [Mon, 25 Oct 2010 14:34:24 +0000 (14:34 +0000)]
cli tool for mip computation
schaerer [Mon, 25 Oct 2010 13:58:33 +0000 (13:58 +0000)]
remove useless txx
srit [Sun, 24 Oct 2010 18:49:45 +0000 (18:49 +0000)]
Removed exception handling at a low level, let them be handled at a higher, e.g. with qt errors. Only update itk pipeline for reading in vvImage to avoid reading unnecessary parts of the image.
schaerer [Sun, 24 Oct 2010 10:22:11 +0000 (10:22 +0000)]
fix warning
srit [Fri, 22 Oct 2010 16:06:20 +0000 (16:06 +0000)]
MS compiler compatibility issues
dsarrut [Fri, 22 Oct 2010 08:40:20 +0000 (08:40 +0000)]
make difference between 2D and 3D with a single slice image (Dim obtained from ITK reader)
dsarrut [Fri, 22 Oct 2010 07:56:30 +0000 (07:56 +0000)]
DB of anatomical features
dsarrut [Fri, 22 Oct 2010 07:56:13 +0000 (07:56 +0000)]
new FillMask with itk filter
dsarrut [Fri, 22 Oct 2010 07:43:56 +0000 (07:43 +0000)]
dummy ui
dsarrut [Fri, 22 Oct 2010 07:42:49 +0000 (07:42 +0000)]
add slider for temporal dim (not used)
dsarrut [Fri, 22 Oct 2010 07:42:20 +0000 (07:42 +0000)]
compile all tools
dsarrut [Fri, 22 Oct 2010 07:40:34 +0000 (07:40 +0000)]
remove debug
dsarrut [Fri, 22 Oct 2010 07:40:20 +0000 (07:40 +0000)]
auto init args ggo
dsarrut [Fri, 22 Oct 2010 07:40:04 +0000 (07:40 +0000)]
updated crop image with itk filter (and no vtk)
dsarrut [Fri, 22 Oct 2010 07:38:05 +0000 (07:38 +0000)]
cosmetic
dsarrut [Fri, 22 Oct 2010 07:37:10 +0000 (07:37 +0000)]
small improvement
dsarrut [Fri, 22 Oct 2010 07:36:34 +0000 (07:36 +0000)]
new FillMask with itk filter
dsarrut [Fri, 22 Oct 2010 07:36:07 +0000 (07:36 +0000)]
remove debug messages
dsarrut [Fri, 22 Oct 2010 07:35:31 +0000 (07:35 +0000)]
add clitkExceptionMacro
dsarrut [Fri, 22 Oct 2010 07:34:46 +0000 (07:34 +0000)]
simplified image pointer (const/non const)
dsarrut [Fri, 22 Oct 2010 07:33:59 +0000 (07:33 +0000)]
new CropImage with AutoCrop and CropLike
dsarrut [Fri, 22 Oct 2010 07:33:19 +0000 (07:33 +0000)]
remove itk:ostringstream dependence
dsarrut [Fri, 22 Oct 2010 07:32:54 +0000 (07:32 +0000)]
cosmetic
dsarrut [Fri, 22 Oct 2010 07:19:27 +0000 (07:19 +0000)]
make explicit write/read on disk
dsarrut [Fri, 22 Oct 2010 07:19:04 +0000 (07:19 +0000)]
remove unused
dsarrut [Fri, 22 Oct 2010 07:18:37 +0000 (07:18 +0000)]
cosmetic
schaerer [Thu, 21 Oct 2010 16:02:37 +0000 (16:02 +0000)]
fix warning
srit [Thu, 21 Oct 2010 12:56:57 +0000 (12:56 +0000)]
Implemented alternative to former split: split on open.
srit [Wed, 20 Oct 2010 15:01:03 +0000 (15:01 +0000)]
Implemented new vvImage scheme: the itk to vtk image converter is now kept as a class member for improved memory handling.
srit [Wed, 20 Oct 2010 14:59:13 +0000 (14:59 +0000)]
Removed action split image from menu, will be reimplemented as a read option
srit [Wed, 20 Oct 2010 14:56:47 +0000 (14:56 +0000)]
Disable tools crop and rigid registration
schaerer [Wed, 20 Oct 2010 13:34:18 +0000 (13:34 +0000)]
itkv4 compatibility
schaerer [Tue, 19 Oct 2010 13:08:05 +0000 (13:08 +0000)]
space-proofness
srit [Fri, 15 Oct 2010 15:37:37 +0000 (15:37 +0000)]
Corrected use of vtkSmartPointers and mistakes in constructor / destructor
dsarrut [Fri, 15 Oct 2010 06:15:46 +0000 (06:15 +0000)]
add clitkCommon.h
dsarrut [Fri, 15 Oct 2010 06:15:21 +0000 (06:15 +0000)]
-add dependencies for all autotools
schaerer [Thu, 14 Oct 2010 13:33:00 +0000 (13:33 +0000)]
fix linking problem
dsarrut [Thu, 14 Oct 2010 09:53:54 +0000 (09:53 +0000)]
change include (itkMacro) to help compilation with ITK4
schaerer [Wed, 13 Oct 2010 15:20:04 +0000 (15:20 +0000)]
mechanism for handling tool dependencies in a modular way.
We still need to describe those dependencies more finely
schaerer [Wed, 13 Oct 2010 15:06:56 +0000 (15:06 +0000)]
separate tools from the rest
srit [Tue, 12 Oct 2010 21:30:15 +0000 (21:30 +0000)]
Removed vtkGridTransform and turned off vtkImageReslice with a define
dsarrut [Mon, 11 Oct 2010 14:55:50 +0000 (14:55 +0000)]
add clitkCommon.h
srit [Wed, 6 Oct 2010 15:39:21 +0000 (15:39 +0000)]
lrint is still not portable
srit [Wed, 6 Oct 2010 15:38:45 +0000 (15:38 +0000)]
ostream does not handle std::string (check http://www.cplusplus.com/reference/iostream/ostream/operator%3C%3C/)
schaerer [Tue, 5 Oct 2010 18:00:15 +0000 (18:00 +0000)]
revived old fast_make script / clean some dependencies
schaerer [Tue, 5 Oct 2010 14:17:13 +0000 (14:17 +0000)]
remove unused file
schaerer [Tue, 5 Oct 2010 14:16:36 +0000 (14:16 +0000)]
create clitkDD.h to avoid the heavy dependency on clitkCommon.h only for DD
schaerer [Tue, 5 Oct 2010 13:26:37 +0000 (13:26 +0000)]
allow the user to chose the axis along which to compute the mip
schaerer [Tue, 5 Oct 2010 13:01:03 +0000 (13:01 +0000)]
move clitkConfiguration.h out of clitkCommon to avoid costly recompilations
fix harmless warning
dsarrut [Tue, 5 Oct 2010 12:27:57 +0000 (12:27 +0000)]
- remove unuseful file
dsarrut [Tue, 5 Oct 2010 09:31:39 +0000 (09:31 +0000)]
*** empty log message ***
dsarrut [Tue, 5 Oct 2010 09:31:29 +0000 (09:31 +0000)]
new Airway filter (experimental)
dsarrut [Tue, 5 Oct 2010 09:31:03 +0000 (09:31 +0000)]
separate airway tracking from extract lung
dsarrut [Tue, 5 Oct 2010 09:30:30 +0000 (09:30 +0000)]
remove debug DD
dsarrut [Tue, 5 Oct 2010 09:30:11 +0000 (09:30 +0000)]
correct bug (copy message)
dsarrut [Mon, 4 Oct 2010 08:06:30 +0000 (08:06 +0000)]
documentation for tree.hh
dsarrut [Mon, 4 Oct 2010 08:06:16 +0000 (08:06 +0000)]
manage tree structures
dsarrut [Mon, 4 Oct 2010 08:05:25 +0000 (08:05 +0000)]
manage anatomical features DB
dsarrut [Mon, 4 Oct 2010 08:04:16 +0000 (08:04 +0000)]
error are now handled by exception
dsarrut [Mon, 4 Oct 2010 08:03:34 +0000 (08:03 +0000)]
add Anatomical DB to library
dsarrut [Mon, 4 Oct 2010 08:03:04 +0000 (08:03 +0000)]
now dump anatomical info (carina position) into a DB
dsarrut [Mon, 4 Oct 2010 07:54:45 +0000 (07:54 +0000)]
read carina position into DB
dsarrut [Mon, 4 Oct 2010 07:54:23 +0000 (07:54 +0000)]
add lower limits for lung (experimental)
dsarrut [Mon, 4 Oct 2010 07:52:56 +0000 (07:52 +0000)]
now dump anatomical info (carina position) into a DB
dsarrut [Mon, 4 Oct 2010 07:51:58 +0000 (07:51 +0000)]
add anatomical feature DB capability to a filter
dsarrut [Mon, 4 Oct 2010 07:49:21 +0000 (07:49 +0000)]
remove debug code
dsarrut [Mon, 4 Oct 2010 07:48:42 +0000 (07:48 +0000)]
add "get number of connected components" function
dsarrut [Mon, 4 Oct 2010 07:47:46 +0000 (07:47 +0000)]
add exception file
dsarrut [Mon, 4 Oct 2010 07:46:52 +0000 (07:46 +0000)]
error are now handled by exception
dsarrut [Mon, 4 Oct 2010 07:46:34 +0000 (07:46 +0000)]
Exception for error management
schaerer [Tue, 28 Sep 2010 11:23:12 +0000 (11:23 +0000)]
changes for CTest
srit [Wed, 22 Sep 2010 09:10:24 +0000 (09:10 +0000)]
Skip last level corrections
dsarrut [Wed, 22 Sep 2010 03:23:29 +0000 (03:23 +0000)]
add skipLastPyramidLevel option
srit [Tue, 21 Sep 2010 10:33:46 +0000 (10:33 +0000)]
Removed unused txx file
grevillot [Tue, 21 Sep 2010 09:37:33 +0000 (09:37 +0000)]
*** empty log message ***
srit [Thu, 16 Sep 2010 15:53:54 +0000 (15:53 +0000)]
Fusion window / level was rounded to int for no good reason
srit [Thu, 16 Sep 2010 15:53:15 +0000 (15:53 +0000)]
Fusion windows level is now 4 decimals
srit [Thu, 16 Sep 2010 15:51:10 +0000 (15:51 +0000)]
Attempt to solve Kumar's issue
srit [Thu, 16 Sep 2010 15:47:28 +0000 (15:47 +0000)]
Reformat with astyle, Kumar had to convert it to dos style
srit [Thu, 16 Sep 2010 13:45:42 +0000 (13:45 +0000)]
Problem with slot in previous commit. Corrected based on overlay example
srit [Thu, 16 Sep 2010 13:29:04 +0000 (13:29 +0000)]
Parsing fusion image from command line
srit [Thu, 16 Sep 2010 12:37:34 +0000 (12:37 +0000)]
Changed headers
srit [Thu, 16 Sep 2010 10:45:45 +0000 (10:45 +0000)]
Modified padding for empire
schaerer [Thu, 16 Sep 2010 08:38:15 +0000 (08:38 +0000)]
support for spaces in file names
srit [Wed, 15 Sep 2010 14:51:26 +0000 (14:51 +0000)]
Do pad before connecting components
srit [Wed, 15 Sep 2010 08:16:51 +0000 (08:16 +0000)]
There were some f***** differences between clitk2 and clitk3 in the BLUT. Tried to take clitk2 version which is more recent according to cvs. They don't look big but they have an effect. Please check!
srit [Mon, 13 Sep 2010 16:40:00 +0000 (16:40 +0000)]
Removed unrequired library linking
schaerer [Fri, 10 Sep 2010 12:51:37 +0000 (12:51 +0000)]
a hopefully better option parser for vv
srit [Fri, 10 Sep 2010 12:38:23 +0000 (12:38 +0000)]
Try to adapt the filter to Jef's clitk2 solution.
schaerer [Thu, 9 Sep 2010 15:32:19 +0000 (15:32 +0000)]
support for the precise flexmap