]> Creatis software - clitk.git/log
clitk.git
13 years agoreplace old resize with new CropLikeImage
dsarrut [Thu, 3 Mar 2011 10:13:16 +0000 (10:13 +0000)]
replace old resize with new CropLikeImage

13 years agoadd "CopyInformation" when crop like another image
dsarrut [Thu, 3 Mar 2011 10:12:42 +0000 (10:12 +0000)]
add "CopyInformation" when crop like another image

13 years agocorrect intermediate spacing flag
dsarrut [Thu, 3 Mar 2011 10:12:12 +0000 (10:12 +0000)]
correct intermediate spacing flag

13 years agoreplace SmartPointer with raw pointer for function (recommended)
dsarrut [Thu, 3 Mar 2011 10:11:38 +0000 (10:11 +0000)]
replace SmartPointer with raw pointer for function (recommended)

13 years agoadd getMemoryUsage
dsarrut [Thu, 3 Mar 2011 10:10:53 +0000 (10:10 +0000)]
add getMemoryUsage

13 years agoRemove useless UpdateReslice
srit [Wed, 2 Mar 2011 18:33:20 +0000 (18:33 +0000)]
Remove useless UpdateReslice

13 years agoUse transform for vvImage objects
srit [Wed, 2 Mar 2011 18:32:36 +0000 (18:32 +0000)]
Use transform for vvImage objects

13 years agoSmall changes, need refactoring
srit [Wed, 2 Mar 2011 18:30:19 +0000 (18:30 +0000)]
Small changes, need refactoring

13 years agoEnable resliced images, put in mTransformedVtkImages
srit [Wed, 2 Mar 2011 18:29:09 +0000 (18:29 +0000)]
Enable resliced images, put in mTransformedVtkImages

13 years agoCommand line options --window --level. Both are required to be accounted for.
srit [Tue, 1 Mar 2011 09:36:17 +0000 (09:36 +0000)]
Command line options --window --level. Both are required to be accounted for.

13 years agoNew functionality: button apply windowing to all images
srit [Mon, 28 Feb 2011 18:24:52 +0000 (18:24 +0000)]
New functionality: button apply windowing to all images

13 years agoAdd tip on image file name with absolute path
srit [Mon, 28 Feb 2011 14:44:44 +0000 (14:44 +0000)]
Add tip on image file name with absolute path

13 years agoChange namespace handling for MSVC++ compilation
srit [Sat, 26 Feb 2011 16:47:18 +0000 (16:47 +0000)]
Change namespace handling for MSVC++ compilation

13 years agoBUG: Add PrintMemory Symbol to clitkCommon even if CLITK_MEMORY_INFO is OFF
delmon [Tue, 22 Feb 2011 08:35:07 +0000 (08:35 +0000)]
BUG: Add PrintMemory Symbol to clitkCommon even if CLITK_MEMORY_INFO is OFF

13 years agoChange preset 3 to 400/20 (like in [Chapet et al])
dsarrut [Tue, 22 Feb 2011 07:17:15 +0000 (07:17 +0000)]
Change preset 3 to 400/20 (like in [Chapet et al])

13 years agoCorrect contours position
dsarrut [Tue, 22 Feb 2011 07:16:28 +0000 (07:16 +0000)]
Correct contours position

13 years agoStation8 almost ok.
dsarrut [Tue, 22 Feb 2011 07:14:00 +0000 (07:14 +0000)]
Station8 almost ok.

13 years agocosmetic
dsarrut [Tue, 22 Feb 2011 07:12:45 +0000 (07:12 +0000)]
cosmetic

13 years agoAdd LabelizeAndCountNumberOfObjects
dsarrut [Tue, 22 Feb 2011 07:12:02 +0000 (07:12 +0000)]
Add LabelizeAndCountNumberOfObjects

13 years agoVivien, Simon stop watching these logs !
dsarrut [Tue, 22 Feb 2011 07:08:15 +0000 (07:08 +0000)]
Vivien, Simon stop watching these logs !

13 years agosmall bugs corrections
dsarrut [Thu, 17 Feb 2011 07:59:06 +0000 (07:59 +0000)]
small bugs corrections

13 years agoadd lineseparation
dsarrut [Thu, 17 Feb 2011 07:57:54 +0000 (07:57 +0000)]
add lineseparation

13 years agoremove extractXXX from compilation
dsarrut [Tue, 15 Feb 2011 11:47:13 +0000 (11:47 +0000)]
remove extractXXX from compilation

13 years agocorrect bug when comment
dsarrut [Tue, 15 Feb 2011 11:34:30 +0000 (11:34 +0000)]
correct bug when comment

13 years agocorrect bug when reload
dsarrut [Tue, 15 Feb 2011 11:33:47 +0000 (11:33 +0000)]
correct bug when reload

13 years agoremove option 'remove'
dsarrut [Tue, 15 Feb 2011 11:33:18 +0000 (11:33 +0000)]
remove option 'remove'

13 years agoremove verbose
dsarrut [Tue, 15 Feb 2011 11:33:00 +0000 (11:33 +0000)]
remove verbose

13 years agomorpho math filter
dsarrut [Tue, 15 Feb 2011 11:31:34 +0000 (11:31 +0000)]
morpho math filter

13 years agoStation8
dsarrut [Tue, 15 Feb 2011 11:31:14 +0000 (11:31 +0000)]
Station8

13 years agoadd cache for read image
dsarrut [Tue, 15 Feb 2011 11:30:53 +0000 (11:30 +0000)]
add cache for read image

13 years agocosmetic
dsarrut [Tue, 15 Feb 2011 11:29:59 +0000 (11:29 +0000)]
cosmetic

13 years agocorrect options scheme
dsarrut [Tue, 15 Feb 2011 11:29:37 +0000 (11:29 +0000)]
correct options scheme

13 years agoadd options
dsarrut [Tue, 15 Feb 2011 11:29:05 +0000 (11:29 +0000)]
add options

13 years agoadd default filename + exception on error
dsarrut [Tue, 15 Feb 2011 11:28:40 +0000 (11:28 +0000)]
add default filename + exception on error

13 years agoadd lib dependence to some tools
dsarrut [Tue, 15 Feb 2011 10:52:41 +0000 (10:52 +0000)]
add lib dependence to some tools

13 years agoadd options ('keep object', 'inverse', verbose etc)
dsarrut [Tue, 15 Feb 2011 10:51:53 +0000 (10:51 +0000)]
add options ('keep object', 'inverse', verbose etc)

13 years agocorrection orientation, add 'keep object' option
dsarrut [Tue, 15 Feb 2011 10:51:03 +0000 (10:51 +0000)]
correction orientation, add 'keep object' option

13 years agoadd 'border' option
dsarrut [Tue, 15 Feb 2011 10:46:13 +0000 (10:46 +0000)]
add 'border' option

13 years agoadd 'OR' operation
dsarrut [Tue, 15 Feb 2011 10:45:37 +0000 (10:45 +0000)]
add 'OR' operation

13 years agoadd missing "allocate"
dsarrut [Tue, 15 Feb 2011 10:45:04 +0000 (10:45 +0000)]
add missing "allocate"

13 years agoadd findExtrema, jointSlices
dsarrut [Tue, 15 Feb 2011 10:44:32 +0000 (10:44 +0000)]
add findExtrema, jointSlices

13 years agosimplify, correct default
dsarrut [Tue, 15 Feb 2011 10:44:07 +0000 (10:44 +0000)]
simplify, correct default

13 years agoadd option to display memory usage if statgrab is installed
dsarrut [Tue, 15 Feb 2011 10:41:19 +0000 (10:41 +0000)]
add option to display memory usage if statgrab is installed
add fromString to convert numbers from String

13 years agocorrect bug in string copy
dsarrut [Tue, 15 Feb 2011 10:40:15 +0000 (10:40 +0000)]
correct bug in string copy

13 years agoadd verbose memory
dsarrut [Tue, 15 Feb 2011 10:39:55 +0000 (10:39 +0000)]
add verbose memory

13 years agoremove debug comment
dsarrut [Tue, 15 Feb 2011 10:39:06 +0000 (10:39 +0000)]
remove debug comment

13 years agocosmetic
dsarrut [Tue, 15 Feb 2011 10:38:47 +0000 (10:38 +0000)]
cosmetic

13 years agoadd option to display memory usage if statgrab is installed
dsarrut [Tue, 15 Feb 2011 10:38:29 +0000 (10:38 +0000)]
add option to display memory usage if statgrab is installed

13 years ago*** empty log message ***
dsarrut [Tue, 15 Feb 2011 10:37:27 +0000 (10:37 +0000)]
*** empty log message ***

13 years ago*** empty log message ***
bouilhol [Tue, 15 Feb 2011 09:46:09 +0000 (09:46 +0000)]
*** empty log message ***

13 years agoRemove bug introduced in previeous patch about initial coeficients
delmon [Wed, 26 Jan 2011 12:58:23 +0000 (12:58 +0000)]
Remove bug introduced in previeous patch about initial coeficients

13 years ago*** empty log message ***
bouilhol [Thu, 20 Jan 2011 16:30:03 +0000 (16:30 +0000)]
*** empty log message ***

13 years ago*** empty log message ***
bouilhol [Wed, 19 Jan 2011 21:48:18 +0000 (21:48 +0000)]
*** empty log message ***

13 years agoAbort if no phase found
bouilhol [Wed, 19 Jan 2011 20:47:09 +0000 (20:47 +0000)]
Abort if no phase found

13 years agoRemoved specific autoscale for unsigned_char and short
srit [Mon, 17 Jan 2011 14:48:58 +0000 (14:48 +0000)]
Removed specific autoscale for unsigned_char and short

13 years agoUse MultipleBSplineDeformableTransform instead of BSplineDeformableTransform in
delmon [Tue, 11 Jan 2011 10:40:18 +0000 (10:40 +0000)]
Use MultipleBSplineDeformableTransform instead of BSplineDeformableTransform in
clitkBLUTDIR, allowing the user to register different regions of an image at
the same time.

13 years agoAdd a boolean to Reset the jacobian memory just when it is needed.
delmon [Tue, 11 Jan 2011 10:37:42 +0000 (10:37 +0000)]
Add a boolean to Reset the jacobian memory just when it is needed.
Add SetJacobianImageData and friendship with MultipleBSplineDeformableTransform
to facilitate and optimise wrapping.

13 years agoAdd a new Transformation that wraps multiple BSplineDeformableTransform to be
delmon [Tue, 11 Jan 2011 10:25:42 +0000 (10:25 +0000)]
Add a new Transformation that wraps multiple BSplineDeformableTransform to be
able to optimize them at the same time.

13 years agoResample mask to overcome the bug with mask that doesn't have the same
delmon [Thu, 6 Jan 2011 09:13:37 +0000 (09:13 +0000)]
Resample mask to overcome the bug with mask that doesn't have the same
resolution as the fixed image.

13 years agoToggle interpolation for fusion and overlay actors to (when applicable)
srit [Thu, 16 Dec 2010 18:04:21 +0000 (18:04 +0000)]
Toggle interpolation for fusion and overlay actors to (when applicable)

13 years agoUse itkLabelGeometryImageFilter instead of itkLabelStatisticsImageFilter it
delmon [Thu, 16 Dec 2010 14:51:47 +0000 (14:51 +0000)]
Use itkLabelGeometryImageFilter instead of itkLabelStatisticsImageFilter it
seems more intuitive to extract a bounding box and propably less expensive.

13 years agovarious update
dsarrut [Wed, 15 Dec 2010 09:05:00 +0000 (09:05 +0000)]
various update

13 years agotest
dsarrut [Wed, 15 Dec 2010 09:04:29 +0000 (09:04 +0000)]
test

13 years agobetter manage resizing roi tool
dsarrut [Wed, 15 Dec 2010 08:55:40 +0000 (08:55 +0000)]
better manage resizing roi tool

13 years agovarious update
dsarrut [Wed, 15 Dec 2010 08:54:58 +0000 (08:54 +0000)]
various update

13 years agoadd short type
dsarrut [Wed, 15 Dec 2010 08:54:35 +0000 (08:54 +0000)]
add short type

13 years agoadd test
dsarrut [Wed, 15 Dec 2010 08:54:23 +0000 (08:54 +0000)]
add test

13 years agoadd enlarge capability
dsarrut [Wed, 15 Dec 2010 08:54:02 +0000 (08:54 +0000)]
add enlarge capability

13 years agoadd crop flag
dsarrut [Wed, 15 Dec 2010 08:53:36 +0000 (08:53 +0000)]
add crop flag

13 years agoadd relativeposition tool
dsarrut [Wed, 15 Dec 2010 08:52:56 +0000 (08:52 +0000)]
add relativeposition tool

13 years agoremove debug
dsarrut [Wed, 15 Dec 2010 08:50:49 +0000 (08:50 +0000)]
remove debug

13 years agoremove debug, new orientation option
dsarrut [Wed, 15 Dec 2010 08:50:00 +0000 (08:50 +0000)]
remove debug, new orientation option

13 years agonew crop like (allow to enlarge image)
dsarrut [Wed, 15 Dec 2010 08:49:14 +0000 (08:49 +0000)]
new crop like (allow to enlarge image)

13 years agoresizeImageLike
dsarrut [Wed, 15 Dec 2010 08:48:55 +0000 (08:48 +0000)]
resizeImageLike

13 years agoadd autocrop and options
dsarrut [Wed, 15 Dec 2010 08:48:37 +0000 (08:48 +0000)]
add autocrop and options

13 years agocosmetic
dsarrut [Wed, 15 Dec 2010 08:48:03 +0000 (08:48 +0000)]
cosmetic

13 years agoadd exception if error
dsarrut [Wed, 15 Dec 2010 08:47:28 +0000 (08:47 +0000)]
add exception if error

13 years agoManually add a dependency on clitkAffineRegistration_ggo.h for
delmon [Wed, 8 Dec 2010 16:54:56 +0000 (16:54 +0000)]
Manually add a dependency on clitkAffineRegistration_ggo.h for
clitkGenericAffineTransform.cxx in order to include the rule to generate it in
the makefile.

13 years agoAdd missing ifdef ITK_USE_OPTIMISED_REGISTRATION_METHODS present in the H file
delmon [Wed, 8 Dec 2010 14:06:06 +0000 (14:06 +0000)]
Add missing ifdef ITK_USE_OPTIMISED_REGISTRATION_METHODS present in the H file
but not in the TXX file.

13 years agoRemoved unfinished work of Jef
srit [Mon, 6 Dec 2010 15:40:02 +0000 (15:40 +0000)]
Removed unfinished work of Jef

13 years agoCopy to "unsorted" directory if dicom key not found
bouilhol [Wed, 24 Nov 2010 13:49:01 +0000 (13:49 +0000)]
Copy to "unsorted" directory if dicom key not found

13 years agoworks even if there are several "/" "\" or "*" in the dicom field and even if there...
bouilhol [Mon, 22 Nov 2010 17:35:42 +0000 (17:35 +0000)]
works even if there are several "/" "\" or "*" in the dicom field and even if there are several fields with the same name

13 years agoworks with the new create_mhd_4D.sh
bouilhol [Mon, 22 Nov 2010 17:32:47 +0000 (17:32 +0000)]
works with the new create_mhd_4D.sh

14 years agodon't crash if ther is a "/" in the dicom field
bouilhol [Tue, 9 Nov 2010 13:52:35 +0000 (13:52 +0000)]
don't crash if ther is a "/" in the dicom field

14 years agoclitkDicomToImage added to clitk3
bouilhol [Fri, 5 Nov 2010 00:04:59 +0000 (00:04 +0000)]
clitkDicomToImage added to clitk3

14 years agoCorrected erroneous free when a real RECTILINEAR field is detected
srit [Thu, 4 Nov 2010 18:22:44 +0000 (18:22 +0000)]
Corrected erroneous free when a real RECTILINEAR field is detected

14 years ago*** empty log message ***
bouilhol [Tue, 26 Oct 2010 15:25:44 +0000 (15:25 +0000)]
*** empty log message ***

14 years ago*** empty log message ***
bouilhol [Tue, 26 Oct 2010 14:39:05 +0000 (14:39 +0000)]
*** empty log message ***

14 years agotemporal median of a sequence of images, to be used for the mid P project
schaerer [Tue, 26 Oct 2010 13:43:54 +0000 (13:43 +0000)]
temporal median of a sequence of images, to be used for the mid P project

14 years agoMIP tool using David's framework
schaerer [Tue, 26 Oct 2010 12:37:54 +0000 (12:37 +0000)]
MIP tool using David's framework

14 years agoRemoved warning
srit [Mon, 25 Oct 2010 16:27:49 +0000 (16:27 +0000)]
Removed warning

14 years agoRemoved vc2010 warnings
srit [Mon, 25 Oct 2010 16:21:29 +0000 (16:21 +0000)]
Removed vc2010 warnings

14 years agocli tool for mip computation
schaerer [Mon, 25 Oct 2010 14:34:24 +0000 (14:34 +0000)]
cli tool for mip computation

14 years agoremove useless txx
schaerer [Mon, 25 Oct 2010 13:58:33 +0000 (13:58 +0000)]
remove useless txx

14 years agoRemoved exception handling at a low level, let them be handled at a higher, e.g....
srit [Sun, 24 Oct 2010 18:49:45 +0000 (18:49 +0000)]
Removed exception handling at a low level, let them be handled at a higher, e.g. with qt errors. Only update itk pipeline for reading in vvImage to avoid reading unnecessary parts of the image.

14 years agofix warning
schaerer [Sun, 24 Oct 2010 10:22:11 +0000 (10:22 +0000)]
fix warning

14 years agoMS compiler compatibility issues
srit [Fri, 22 Oct 2010 16:06:20 +0000 (16:06 +0000)]
MS compiler compatibility issues

14 years agomake difference between 2D and 3D with a single slice image (Dim obtained from ITK...
dsarrut [Fri, 22 Oct 2010 08:40:20 +0000 (08:40 +0000)]
make difference between 2D and 3D with a single slice image (Dim obtained from ITK reader)

14 years agoDB of anatomical features
dsarrut [Fri, 22 Oct 2010 07:56:30 +0000 (07:56 +0000)]
DB of anatomical features

14 years agonew FillMask with itk filter
dsarrut [Fri, 22 Oct 2010 07:56:13 +0000 (07:56 +0000)]
new FillMask with itk filter