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Creatis software - clitk.git/log
David Sarrut [Mon, 22 Aug 2016 09:55:04 +0000 (11:55 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Mon, 22 Aug 2016 07:54:02 +0000 (09:54 +0200)]
Debug nii files IO
tbaudier [Tue, 19 Jul 2016 14:55:20 +0000 (16:55 +0200)]
Modifications for Windows compilation
tbaudier [Tue, 12 Jul 2016 13:17:17 +0000 (15:17 +0200)]
Debug VF display
tbaudier [Mon, 11 Jul 2016 13:12:58 +0000 (15:12 +0200)]
Ensure compatibility with VTK5
tbaudier [Fri, 8 Jul 2016 11:21:05 +0000 (13:21 +0200)]
Add --mha tag in clitkDicomRTStruct2Image to allow structure with special characters in the name
David Sarrut [Tue, 5 Jul 2016 11:14:07 +0000 (13:14 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Tue, 5 Jul 2016 09:28:26 +0000 (11:28 +0200)]
Remove a render
Speed up the contour display for ROI
tbaudier [Tue, 5 Jul 2016 09:19:19 +0000 (11:19 +0200)]
Remove Render for ROI and Contours
Seems to speed up the display process when you change of slice or move the pointer
tbaudier [Tue, 5 Jul 2016 08:44:42 +0000 (10:44 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Tue, 5 Jul 2016 08:41:50 +0000 (10:41 +0200)]
Remove Update for ROI and Contours Actors
Seems to slow down the process after clicking on Set All ROI visible and Set All Contours Visible
tbaudier [Tue, 5 Jul 2016 08:29:51 +0000 (10:29 +0200)]
disconnect a signal/slot for ROI
Avoid to call the function twice
tbaudier [Tue, 5 Jul 2016 08:12:51 +0000 (10:12 +0200)]
disconnect a signal/slot for ROI contours
Avoid to call the function twice
David Sarrut [Mon, 27 Jun 2016 13:48:00 +0000 (15:48 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Fri, 24 Jun 2016 15:26:25 +0000 (17:26 +0200)]
COMP: itk v4.10 and c++11
Simon Rit [Fri, 24 Jun 2016 14:42:53 +0000 (16:42 +0200)]
Removed generated files from master branch
Simon Rit [Fri, 24 Jun 2016 14:42:04 +0000 (16:42 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Tue, 21 Jun 2016 07:53:50 +0000 (09:53 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Fri, 17 Jun 2016 13:45:40 +0000 (15:45 +0200)]
Ensure compatibility with VTK6 for Image2DicomRTStruct tool
tbaudier [Tue, 14 Jun 2016 06:24:55 +0000 (08:24 +0200)]
Merge branch 'static'
tbaudier [Tue, 14 Jun 2016 06:24:17 +0000 (08:24 +0200)]
Ensure the static compilation with Qt4
tbaudier [Tue, 14 Jun 2016 06:23:41 +0000 (08:23 +0200)]
Find the correct version of Qt based on the VTK link in CMake
tbaudier [Thu, 9 Jun 2016 08:28:47 +0000 (10:28 +0200)]
Allow to open mhd/jpeg/... images with a static compilation with a .pro file
tbaudier [Thu, 9 Jun 2016 08:10:39 +0000 (10:10 +0200)]
Add clitkConfiguration.h for static compilation with .pro file
tbaudier [Thu, 9 Jun 2016 08:06:35 +0000 (10:06 +0200)]
Add _ggo files for static compilation with .pro file
tbaudier [Thu, 9 Jun 2016 08:05:57 +0000 (10:05 +0200)]
Add vvConfiguration for static compilation with .pro file
tbaudier [Thu, 9 Jun 2016 08:04:43 +0000 (10:04 +0200)]
Add .pro file for static compilation
tbaudier [Thu, 9 Jun 2016 08:04:12 +0000 (10:04 +0200)]
Add VTK_MODULE_INIT
tbaudier [Thu, 9 Jun 2016 08:02:22 +0000 (10:02 +0200)]
Ensure headers compatibility for static compilation
tbaudier [Thu, 9 Jun 2016 08:00:28 +0000 (10:00 +0200)]
Ensure CLITK_EXPERIMENTAL is defined
(needed for static compilation)
David Sarrut [Tue, 7 Jun 2016 09:20:33 +0000 (11:20 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Brent Huisman [Mon, 6 Jun 2016 08:56:27 +0000 (10:56 +0200)]
ADDED: a version of the job submission script that does not copy the data-dir. Useful for large data-dirs
David Sarrut [Mon, 23 May 2016 06:18:48 +0000 (08:18 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
tbaudier [Wed, 18 May 2016 13:49:36 +0000 (15:49 +0200)]
Fix profile tool with image with a negative spacing
tbaudier [Wed, 18 May 2016 08:39:39 +0000 (10:39 +0200)]
Debug ROI display
if contour display was checked and ROI unchecked, the ROI was displayed
Now just contours are displayed
tbaudier [Tue, 15 Mar 2016 08:02:34 +0000 (09:02 +0100)]
Ensure compatibility with ITK < v4.7
tbaudier [Mon, 14 Mar 2016 09:57:41 +0000 (10:57 +0100)]
Add volume to clitkImageStatistics
tbaudier [Thu, 10 Mar 2016 16:41:03 +0000 (17:41 +0100)]
Ensure compatibility with VTK < v5.10
tbaudier [Thu, 10 Mar 2016 15:58:22 +0000 (16:58 +0100)]
Ensure compatibility with VTK6 in vvSlicer
tbaudier [Thu, 10 Mar 2016 14:45:12 +0000 (15:45 +0100)]
Debug fusion/overlay display with VTK5
tbaudier [Thu, 10 Mar 2016 08:37:38 +0000 (09:37 +0100)]
Add a tag to preserve UID and private DICOM tags for clitkWriteDicomSeries (see previous commit)
tbaudier [Wed, 9 Mar 2016 16:21:10 +0000 (17:21 +0100)]
Ensure to have the same series UID while writing a Dicom serie
tbaudier [Wed, 9 Mar 2016 14:11:43 +0000 (15:11 +0100)]
Add a tolerance when calculate euler angle with rigid transformation
tbaudier [Wed, 9 Mar 2016 13:36:22 +0000 (14:36 +0100)]
With the resample tool, ensure to have the same transformation after the resampling in vv
tbaudier [Wed, 9 Mar 2016 12:50:25 +0000 (13:50 +0100)]
Ensure compatibility between Qt5.5 and Qt5.x or less
tbaudier [Wed, 9 Mar 2016 08:58:16 +0000 (09:58 +0100)]
Debug Resample tool
tbaudier [Mon, 7 Mar 2016 08:42:17 +0000 (09:42 +0100)]
Avoid to open more than one overlay/fusion/vf per image with command line
tbaudier [Wed, 2 Mar 2016 15:49:11 +0000 (16:49 +0100)]
Debug 4D ROI
tbaudier [Wed, 2 Mar 2016 10:28:28 +0000 (11:28 +0100)]
Debug signal/slot in vvToolBinarize
tbaudier [Wed, 2 Mar 2016 10:03:34 +0000 (11:03 +0100)]
Debug vf display
tbaudier [Mon, 29 Feb 2016 08:41:14 +0000 (09:41 +0100)]
Undo the current transformation before cropping and Redo after it
tbaudier [Fri, 26 Feb 2016 12:51:49 +0000 (13:51 +0100)]
Avoid crash with non-orthogonal matrices
tbaudier [Thu, 25 Feb 2016 15:16:23 +0000 (16:16 +0100)]
Ensure to have the correct value with transformed image in the sliders
tbaudier [Thu, 25 Feb 2016 14:25:33 +0000 (15:25 +0100)]
Change the origin of registered cropped image in clitkCropImage
tbaudier [Tue, 23 Feb 2016 13:45:27 +0000 (14:45 +0100)]
Fix the profile line display with transformation
tbaudier [Tue, 23 Feb 2016 12:53:50 +0000 (13:53 +0100)]
The profile points follow the current transform
tbaudier [Tue, 23 Feb 2016 12:21:52 +0000 (13:21 +0100)]
Fix the coordinates of new landmarks
when images are already registered
tbaudier [Tue, 23 Feb 2016 11:00:03 +0000 (12:00 +0100)]
Updare the Window & Level spin boxes in the main window
when the Window/Level are set up with --window and --level tags
tbaudier [Tue, 23 Feb 2016 10:12:15 +0000 (11:12 +0100)]
Landmarks move with the image during registration
tbaudier [Mon, 22 Feb 2016 14:44:58 +0000 (15:44 +0100)]
Consistency of information between Info Pannel and Cursor Position Overlay
Now the position is correct (in voxel) event with an anistropic image
tbaudier [Mon, 22 Feb 2016 14:14:27 +0000 (15:14 +0100)]
Debug LandmarkPanel
> Display the correct intensity value (after a transformation in the panel)
> With 2 images, the panel doesn't move anymore while the mouse move to another image
tbaudier [Fri, 19 Feb 2016 15:29:21 +0000 (16:29 +0100)]
Consistency of information between Info Pannel and Cursor Position Overlay
> Now the position in voxel is the same and change with transformation (as the value and not the position in mm)
tbaudier [Fri, 19 Feb 2016 10:54:18 +0000 (11:54 +0100)]
Add Ctrl+O shortcut to open an image
tbaudier [Fri, 19 Feb 2016 10:36:51 +0000 (11:36 +0100)]
Debug for MacOSX Retina
tbaudier [Fri, 19 Feb 2016 10:23:45 +0000 (11:23 +0100)]
Debug the use of transformation matrix .mat
tbaudier [Fri, 19 Feb 2016 09:02:30 +0000 (10:02 +0100)]
Ensure the compilation with Qt4
tbaudier [Thu, 18 Feb 2016 16:07:29 +0000 (17:07 +0100)]
Ensure compatibility between VTK5 & VTK6
tbaudier [Thu, 18 Feb 2016 14:51:40 +0000 (15:51 +0100)]
Improve code reading in the CMakeLists.txt
To distinguish Qt4 and Qt5
tbaudier [Thu, 18 Feb 2016 14:24:54 +0000 (15:24 +0100)]
Remove ITK3 and ITK4.2 tests and dependencies
Now, minimum required version is ITK4.3
tbaudier [Thu, 18 Feb 2016 11:11:35 +0000 (12:11 +0100)]
Ensure to have the same Direction for input and label images for clitkImageStatistics
tbaudier [Thu, 18 Feb 2016 09:26:31 +0000 (10:26 +0100)]
Debug MacOSX Display with Profile Tool
tbaudier [Thu, 18 Feb 2016 09:13:13 +0000 (10:13 +0100)]
Merge branch 'VTK6_Qt5' of git.creatis.insa-lyon.fr:clitk into VTK6_Qt5
tbaudier [Thu, 18 Feb 2016 09:09:38 +0000 (10:09 +0100)]
Debug --contour while opening
Simon Rit [Thu, 18 Feb 2016 06:38:49 +0000 (07:38 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk into VTK6_Qt5
Simon Rit [Wed, 17 Feb 2016 16:32:10 +0000 (17:32 +0100)]
Both the lower and the upper extent of the roi for the w feature should be in the maximum extent
tbaudier [Wed, 17 Feb 2016 09:12:56 +0000 (10:12 +0100)]
Merge branch 'VTK6_Qt5' of git.creatis.insa-lyon.fr:clitk into VTK6_Qt5
tbaudier [Wed, 17 Feb 2016 09:08:50 +0000 (10:08 +0100)]
Debug wrong extent with local windowing (w) outside of the image
Simon Rit [Tue, 16 Feb 2016 21:39:21 +0000 (22:39 +0100)]
Fix for retina display
http://public.kitware.com/pipermail/vtkusers/2015-February/090117.html
Simon Rit [Tue, 16 Feb 2016 21:17:45 +0000 (22:17 +0100)]
Mark all unusual cmake options as advanced
tbaudier [Thu, 11 Feb 2016 09:43:39 +0000 (10:43 +0100)]
Can open Dicom RTStruct without an external gdcm
tbaudier [Tue, 9 Feb 2016 10:34:57 +0000 (11:34 +0100)]
Change the origin of selected point for Profile to the center of the voxel
tbaudier [Mon, 8 Feb 2016 15:51:19 +0000 (16:51 +0100)]
Ensure compatibility with VTK7
tbaudier [Mon, 8 Feb 2016 15:28:44 +0000 (16:28 +0100)]
Change voxel position into double
tbaudier [Mon, 8 Feb 2016 10:47:44 +0000 (11:47 +0100)]
Ensure compatibility with VTK6
tbaudier [Fri, 5 Feb 2016 15:58:27 +0000 (16:58 +0100)]
Compute the distance from the first point in the Profile Tool and display it in the X-axis of the profile chart
tbaudier [Fri, 5 Feb 2016 15:57:24 +0000 (16:57 +0100)]
Merge branch 'VTK6_Qt5' into VTK6_Qt5_LineProfile
Conflicts:
vv/vvToolProfile.cxx
tbaudier [Fri, 5 Feb 2016 14:24:13 +0000 (15:24 +0100)]
Change the name of the axis in the profile tool
Add comments for the SetOpacity(0.995)
Try to debug the focus problem with Mac and with the F1 shortcut
tbaudier [Tue, 2 Feb 2016 14:20:23 +0000 (15:20 +0100)]
Change the computation of the Extent for Overlay, Fusion and VF
Add an updateDisplayExtent after loadind Overlay, Fusion and VF
tbaudier [Tue, 2 Feb 2016 13:12:54 +0000 (14:12 +0100)]
Merge branch 'VTK6_Qt5' of git.creatis.insa-lyon.fr:clitk into VTK6_Qt5
tbaudier [Tue, 2 Feb 2016 13:10:25 +0000 (14:10 +0100)]
Avoid Warnings with QtDesigner include and Qt5
In vvSlicerManager.cxx: Debug: when opening a second image, all slicer were updated, not only the first
Simon Rit [Tue, 2 Feb 2016 09:53:27 +0000 (10:53 +0100)]
Removed trailing semi-colon
Simon Rit [Tue, 2 Feb 2016 09:53:01 +0000 (10:53 +0100)]
Removed copy paste
Simon Rit [Tue, 2 Feb 2016 09:51:03 +0000 (10:51 +0100)]
Removed mat file from experimental
tbaudier [Mon, 1 Feb 2016 13:37:09 +0000 (14:37 +0100)]
Merge branch 'VTK6_Qt5' into VTK6_Qt5_LineProfile
tbaudier [Mon, 1 Feb 2016 13:26:20 +0000 (14:26 +0100)]
Ensure the compilation with Qt4 and Qt5
tbaudier [Mon, 1 Feb 2016 07:38:48 +0000 (08:38 +0100)]
Display a line between the 2 profile points.
Debug problem of extent
+ Try to debug the line display with landmark
tbaudier [Wed, 20 Jan 2016 16:06:03 +0000 (17:06 +0100)]
Debug a segmentation fault during exit with an opened Profile window
Add shortcuts for selection of the 2 points for profile (Ctrl+1 or Ctrl+2)
tbaudier [Wed, 20 Jan 2016 11:00:11 +0000 (12:00 +0100)]
Display a line between Profile points
vvSlicer has to inherit from QObject to send signals
tbaudier [Tue, 12 Jan 2016 10:10:34 +0000 (11:10 +0100)]
Merge branch 'VTK6_Qt5_4DROI' into VTK6_Qt5
tbaudier [Tue, 12 Jan 2016 10:10:02 +0000 (11:10 +0100)]
Add remove one selected ROI button
Correct Select All Contour button (ROI) behavior