]> Creatis software - clitk.git/log
clitk.git
11 years agoCompatibility
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Compatibility

11 years agoAdd border flag to auto crop
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add border flag to auto crop

11 years agoDisplay k1 and set k1 to relPosFilter
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Display k1 and set k1 to relPosFilter

11 years agoAdd ushort pixel type
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add ushort pixel type

11 years agoAdd line break after display
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add line break after display

11 years agoAdd warning
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add warning

11 years agoAdd short type
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add short type

11 years agoImprove code clarity (hopefully)
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Improve code clarity (hopefully)

11 years agoAdd another operation -ln(I/IO)
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add another operation -ln(I/IO)

11 years agoRemove comments
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove comments

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Mon, 17 Dec 2012 08:26:06 +0000 (09:26 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agoAdded GoToLandmark functionality
Romulo Pinho [Thu, 13 Dec 2012 16:16:02 +0000 (17:16 +0100)]
Added GoToLandmark functionality

- like GoToCursor, but when we double-click a landmark in the landmark panel's table

12 years agoadd "Remove All" landmarks
Romulo Pinho [Thu, 13 Dec 2012 15:31:43 +0000 (16:31 +0100)]
add "Remove All" landmarks

12 years ago(more) robust handling of landmarks in time-sequences
Romulo Pinho [Thu, 13 Dec 2012 15:11:43 +0000 (16:11 +0100)]
(more) robust handling of landmarks in time-sequences

- --landmarks [--sequence] cmd line option (including help message!)
- landmark display follows time-frame
- landmark addition/removal also matches time-frame

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Wed, 12 Dec 2012 07:13:32 +0000 (08:13 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agoadded --landmarks to vv's help message
Romulo Pinho [Thu, 6 Dec 2012 13:06:02 +0000 (14:06 +0100)]
added --landmarks to vv's help message

- we can generate a new release now...

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Thu, 6 Dec 2012 13:02:11 +0000 (14:02 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agoadded new cmd line option: --landmarks
Romulo Pinho [Thu, 6 Dec 2012 13:01:31 +0000 (14:01 +0100)]
added new cmd line option: --landmarks

- guess what it does...

12 years agoadded support to new landmark-file type
Romulo Pinho [Thu, 6 Dec 2012 12:35:17 +0000 (13:35 +0100)]
added support to new landmark-file type

- .pts from Jef's studies

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Tue, 27 Nov 2012 15:21:04 +0000 (16:21 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agoSliceBySlice filter for uchar
David Sarrut [Mon, 26 Nov 2012 06:46:09 +0000 (07:46 +0100)]
SliceBySlice filter for uchar

12 years agoTry to precompile segmentation filter with uchar (faster compil)
David Sarrut [Mon, 26 Nov 2012 06:45:18 +0000 (07:45 +0100)]
Try to precompile segmentation filter with uchar (faster compil)

12 years agoRemove check on image information when loading merged image with time
Simon Rit [Fri, 23 Nov 2012 11:09:45 +0000 (12:09 +0100)]
Remove check on image information when loading merged image with time
from GUI to be consistent with command line. Since we are reslicing
anyway, there is no need to have similar info anymore.

12 years agoMerge branch 'master' of tux.creatis.insa-lyon.fr:clitk
Vivien Delmon [Wed, 21 Nov 2012 08:41:45 +0000 (09:41 +0100)]
Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk

12 years agoAdded ImagX file format from RTK
Simon Rit [Tue, 20 Nov 2012 16:30:21 +0000 (17:30 +0100)]
Added ImagX file format from RTK

12 years agoMerge branch 'master' of tux.creatis.insa-lyon.fr:clitk
Vivien Delmon [Mon, 19 Nov 2012 11:02:48 +0000 (12:02 +0100)]
Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk

12 years agoHandling SYSTEM GDCM build and install trees (correction)
Romulo Pinho [Thu, 15 Nov 2012 09:03:49 +0000 (10:03 +0100)]
Handling SYSTEM GDCM build and install trees (correction)

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Thu, 15 Nov 2012 08:50:48 +0000 (09:50 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agoITK4 compatibility
Romulo Pinho [Thu, 15 Nov 2012 08:30:11 +0000 (09:30 +0100)]
ITK4 compatibility

12 years agohandling SYSTEM_GDCM from build and install trees
Romulo Pinho [Thu, 15 Nov 2012 08:29:27 +0000 (09:29 +0100)]
handling SYSTEM_GDCM from build and install trees

12 years agoAdded support for ESRF reconstructions
Simon Rit [Tue, 13 Nov 2012 17:42:59 +0000 (18:42 +0100)]
Added support for ESRF reconstructions

12 years agoCopied ESRF Edf processing from rtk and use rtk file names to emphasize that they...
Simon Rit [Tue, 13 Nov 2012 17:21:13 +0000 (18:21 +0100)]
Copied ESRF Edf processing from rtk and use rtk file names to emphasize that they are comming from rtk.

12 years agoCopied His processing from rtk and use rtk file names to emphasize that they are...
Simon Rit [Tue, 13 Nov 2012 16:30:43 +0000 (17:30 +0100)]
Copied His processing from rtk and use rtk file names to emphasize that they are comming from rtk.

12 years agoCopied Hnd processing from rtk and use rtk file names to emphasize that they are...
Simon Rit [Tue, 13 Nov 2012 16:27:35 +0000 (17:27 +0100)]
Copied Hnd processing from rtk and use rtk file names to emphasize that they are comming from rtk.

12 years agoadded support for more VF file types
Romulo Pinho [Fri, 9 Nov 2012 10:28:14 +0000 (11:28 +0100)]
added support for more VF file types

12 years agoRemoved git tag on VV to compile HEAD
Simon Rit [Fri, 9 Nov 2012 10:15:39 +0000 (11:15 +0100)]
Removed git tag on VV to compile HEAD

12 years agocompilation issues
Romulo Pinho [Thu, 8 Nov 2012 08:27:00 +0000 (09:27 +0100)]
compilation issues

- simplification of RPATH assignment when make-installing
- handling the use of ITK with USE_SYSTEM_GDCM

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Tue, 6 Nov 2012 09:32:24 +0000 (10:32 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agoAdd option to detect too small segmented structures
David Sarrut [Tue, 6 Nov 2012 09:23:38 +0000 (10:23 +0100)]
Add option to detect too small segmented structures

12 years agoAdd option to detect too small segmented structures
David Sarrut [Tue, 6 Nov 2012 09:22:53 +0000 (10:22 +0100)]
Add option to detect too small segmented structures

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Mon, 5 Nov 2012 16:44:14 +0000 (17:44 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agocorrectly reading contour colours for GDCM 2.x
Romulo Pinho [Mon, 5 Nov 2012 16:42:12 +0000 (17:42 +0100)]
correctly reading contour colours for GDCM 2.x

12 years agoadjusting dependencies
Romulo Pinho [Mon, 5 Nov 2012 09:18:57 +0000 (10:18 +0100)]
adjusting dependencies

12 years agoSorry I push the wrong file
David Sarrut [Fri, 2 Nov 2012 19:35:17 +0000 (12:35 -0700)]
Sorry I push the wrong file

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 2 Nov 2012 19:25:11 +0000 (12:25 -0700)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

Conflicts:
vv/vvMainWindow.cxx

12 years agoAdd nii.gz as file extension
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add nii.gz as file extension

12 years agoMerge branch 'master' of tux.creatis.insa-lyon.fr:clitk
Vivien Delmon [Wed, 31 Oct 2012 10:11:10 +0000 (11:11 +0100)]
Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk

12 years agoAdded svl file format (Clarity)
Benoît Presles [Tue, 30 Oct 2012 10:57:16 +0000 (11:57 +0100)]
Added svl file format (Clarity)

12 years agoMerge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Benoît Presles [Tue, 30 Oct 2012 10:53:35 +0000 (11:53 +0100)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk

12 years agoFixed slice error: check that it is in extent before updating extents
Simon Rit [Tue, 30 Oct 2012 10:50:05 +0000 (11:50 +0100)]
Fixed slice error: check that it is in extent before updating extents

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Mon, 29 Oct 2012 15:45:31 +0000 (16:45 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agobug removal
Romulo Pinho [Thu, 25 Oct 2012 10:03:21 +0000 (12:03 +0200)]
bug removal

- correcting iterator regions

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Romulo Pinho [Wed, 24 Oct 2012 20:50:13 +0000 (22:50 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agobug removal
Romulo Pinho [Wed, 24 Oct 2012 20:49:22 +0000 (22:49 +0200)]
bug removal

- was accessing pixel neighbours outside the image buffer...

12 years agoMerge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Benoît Presles [Wed, 24 Oct 2012 11:20:16 +0000 (13:20 +0200)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk

12 years agoupdated the render window for the labeled landmarks
Benoît Presles [Wed, 24 Oct 2012 11:18:32 +0000 (13:18 +0200)]
updated the render window for the labeled landmarks

12 years agoNo typename outside template (MSVC sensitive)
Simon Rit [Wed, 24 Oct 2012 07:08:23 +0000 (09:08 +0200)]
No typename outside template (MSVC sensitive)

12 years agoMerge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Benoît Presles [Tue, 23 Oct 2012 17:40:55 +0000 (19:40 +0200)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk

12 years agoMerge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Benoît Presles [Tue, 23 Oct 2012 17:02:58 +0000 (19:02 +0200)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk

12 years agoadded labels to landmarks
Benoît Presles [Tue, 23 Oct 2012 17:01:59 +0000 (19:01 +0200)]
added labels to landmarks

12 years agoClean-up while debugging
Simon Rit [Tue, 23 Oct 2012 16:56:26 +0000 (18:56 +0200)]
Clean-up while debugging

12 years agoMerge branch 'master' of tux.creatis.insa-lyon.fr:clitk
Vivien Delmon [Tue, 23 Oct 2012 12:28:14 +0000 (14:28 +0200)]
Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk

12 years agofurther changes to solve bug #1714
Romulo Pinho [Tue, 23 Oct 2012 09:51:00 +0000 (11:51 +0200)]
further changes to solve bug #1714

12 years agoMerge branch 'master' of tux.creatis.insa-lyon.fr:clitk
Vivien Delmon [Mon, 22 Oct 2012 14:27:36 +0000 (16:27 +0200)]
Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk

12 years agoBUG: Problem with absolute paths
Vivien Delmon [Mon, 22 Oct 2012 14:26:37 +0000 (16:26 +0200)]
BUG: Problem with absolute paths

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Mon, 22 Oct 2012 13:29:26 +0000 (15:29 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agoFix for Bug #1714: only check on sliders of the visible vvSlicer.
Simon Rit [Mon, 22 Oct 2012 13:27:26 +0000 (15:27 +0200)]
Fix for Bug #1714: only check on sliders of the visible vvSlicer.

12 years agoMerge branch 'master' of tux.creatis.insa-lyon.fr:clitk
Vivien Delmon [Mon, 22 Oct 2012 10:54:39 +0000 (12:54 +0200)]
Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk

12 years agoVV: added links to Read/Save state
Romulo Pinho [Fri, 19 Oct 2012 09:52:27 +0000 (11:52 +0200)]
VV: added links to Read/Save state

12 years agoChange comment for buggy part
David Sarrut [Fri, 19 Oct 2012 07:41:26 +0000 (09:41 +0200)]
Change comment for buggy part

12 years agoDefault opacity is now 0.5
David Sarrut [Fri, 19 Oct 2012 07:40:05 +0000 (09:40 +0200)]
Default opacity is now 0.5

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 19 Oct 2012 07:39:40 +0000 (09:39 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agovv: corrected tree column updates when maximizing view
Romulo Pinho [Thu, 18 Oct 2012 08:07:56 +0000 (10:07 +0200)]
vv: corrected tree column updates when maximizing view

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Thu, 18 Oct 2012 07:57:48 +0000 (09:57 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agoVV panning: middlebutton = left button + shift
Romulo Pinho [Thu, 18 Oct 2012 07:37:37 +0000 (09:37 +0200)]
VV panning: middlebutton = left button + shift

- a change made specially for mac owners and their mice-without-middle-button issues... ;-)

12 years agoupdated help message concerning window/level cmd line option
Romulo Pinho [Thu, 18 Oct 2012 07:07:30 +0000 (09:07 +0200)]
updated help message concerning window/level cmd line option

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Wed, 17 Oct 2012 10:55:39 +0000 (12:55 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

Conflicts:
vv/vv.cxx
vv/vvSlicerManager.cxx
vv/vvSlicerManagerCommand.cxx

12 years agoAdd option to detect too small CCL (stomach)
David Sarrut [Wed, 17 Oct 2012 10:48:34 +0000 (12:48 +0200)]
Add option to detect too small CCL (stomach)

12 years agowindow/level in read/save state
Romulo Pinho [Wed, 17 Oct 2012 10:41:40 +0000 (12:41 +0200)]
window/level in read/save state

12 years agoaccepts multiple window/level in cmd-line
Romulo Pinho [Wed, 17 Oct 2012 09:39:56 +0000 (11:39 +0200)]
accepts multiple window/level in cmd-line

- window/level is applied to set of images (sequences too) appearing before the window/level
- useful when opening, eg, different modalities at the same time

12 years agopreserve crosshair position when changing orientation
Romulo Pinho [Tue, 16 Oct 2012 21:18:37 +0000 (23:18 +0200)]
preserve crosshair position when changing orientation

- it used to jump to the slice in the middle of the volume

12 years agomaximizes the selected slicer
Romulo Pinho [Tue, 16 Oct 2012 14:40:04 +0000 (16:40 +0200)]
maximizes the selected slicer

- before it was just the NW one.

12 years agogdcm 1.X compatibility
Romulo Pinho [Mon, 15 Oct 2012 08:44:25 +0000 (10:44 +0200)]
gdcm 1.X compatibility

12 years agoMerge branch 'master' of tux.creatis.insa-lyon.fr:clitk
Vivien Delmon [Wed, 10 Oct 2012 09:33:17 +0000 (11:33 +0200)]
Merge branch 'master' of tux.creatis.insa-lyon.fr:clitk

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Wed, 10 Oct 2012 08:26:39 +0000 (10:26 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

Conflicts:
vv/vv.cxx

12 years agoRemove warning.
Vivien Delmon [Mon, 8 Oct 2012 09:53:57 +0000 (11:53 +0200)]
Remove warning.

Missing a return true.

12 years agoFix for MSVC CPack
Simon Rit [Wed, 3 Oct 2012 08:16:16 +0000 (10:16 +0200)]
Fix for MSVC CPack

12 years agoVarious fixes
Simon Rit [Mon, 1 Oct 2012 14:56:38 +0000 (16:56 +0200)]
Various fixes

12 years agoUpdated version for new release v1.3.0
Simon Rit [Mon, 1 Oct 2012 14:52:21 +0000 (16:52 +0200)]
Updated version for new release

12 years agoFix for old versions of gcc
Simon Rit [Mon, 1 Oct 2012 14:44:05 +0000 (16:44 +0200)]
Fix for old versions of gcc

12 years agocorrections post- "-h" addition in VV
Romulo Pinho [Mon, 1 Oct 2012 13:19:16 +0000 (15:19 +0200)]
corrections post- "-h" addition in VV

12 years agoadded "-h" for help option VV
Romulo Pinho [Mon, 1 Oct 2012 08:35:37 +0000 (10:35 +0200)]
added "-h" for help option VV

12 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Fri, 28 Sep 2012 13:04:34 +0000 (15:04 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

12 years agoSync gengetopt cmake files with rtk
Simon Rit [Fri, 28 Sep 2012 13:03:17 +0000 (15:03 +0200)]
Sync gengetopt cmake files with rtk

12 years agouse of relative path for default study/series description
dbcache [Fri, 28 Sep 2012 11:27:26 +0000 (13:27 +0200)]
use of relative path for default study/series description

12 years agoerror in dicom key setting...
Romulo Pinho [Fri, 28 Sep 2012 09:57:47 +0000 (11:57 +0200)]
error in dicom key setting...

12 years agodefault values for study's/series' ID, time, date, number, description
Romulo Pinho [Thu, 27 Sep 2012 15:47:59 +0000 (17:47 +0200)]
default values for study's/series' ID, time, date, number, description

12 years agoGDCM 1.x compatibility
dbcache [Thu, 27 Sep 2012 14:55:43 +0000 (16:55 +0200)]
GDCM 1.x compatibility

12 years agonewStudyUID forces newSeriesUID
Romulo Pinho [Thu, 27 Sep 2012 14:10:23 +0000 (16:10 +0200)]
newStudyUID forces newSeriesUID

- also some bug corrections...

12 years agocorrections...
dbcache [Thu, 27 Sep 2012 13:17:45 +0000 (15:17 +0200)]
corrections...