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Creatis software - clitk.git/log
tbaudier [Wed, 17 Feb 2016 09:12:56 +0000 (10:12 +0100)]
Merge branch 'VTK6_Qt5' of git.creatis.insa-lyon.fr:clitk into VTK6_Qt5
tbaudier [Wed, 17 Feb 2016 09:08:50 +0000 (10:08 +0100)]
Debug wrong extent with local windowing (w) outside of the image
Simon Rit [Tue, 16 Feb 2016 21:39:21 +0000 (22:39 +0100)]
Fix for retina display
http://public.kitware.com/pipermail/vtkusers/2015-February/090117.html
Simon Rit [Tue, 16 Feb 2016 21:17:45 +0000 (22:17 +0100)]
Mark all unusual cmake options as advanced
tbaudier [Thu, 11 Feb 2016 09:43:39 +0000 (10:43 +0100)]
Can open Dicom RTStruct without an external gdcm
tbaudier [Tue, 9 Feb 2016 10:34:57 +0000 (11:34 +0100)]
Change the origin of selected point for Profile to the center of the voxel
tbaudier [Mon, 8 Feb 2016 15:51:19 +0000 (16:51 +0100)]
Ensure compatibility with VTK7
tbaudier [Mon, 8 Feb 2016 15:28:44 +0000 (16:28 +0100)]
Change voxel position into double
tbaudier [Mon, 8 Feb 2016 10:47:44 +0000 (11:47 +0100)]
Ensure compatibility with VTK6
tbaudier [Fri, 5 Feb 2016 15:58:27 +0000 (16:58 +0100)]
Compute the distance from the first point in the Profile Tool and display it in the X-axis of the profile chart
tbaudier [Fri, 5 Feb 2016 15:57:24 +0000 (16:57 +0100)]
Merge branch 'VTK6_Qt5' into VTK6_Qt5_LineProfile
Conflicts:
vv/vvToolProfile.cxx
tbaudier [Fri, 5 Feb 2016 14:24:13 +0000 (15:24 +0100)]
Change the name of the axis in the profile tool
Add comments for the SetOpacity(0.995)
Try to debug the focus problem with Mac and with the F1 shortcut
tbaudier [Tue, 2 Feb 2016 14:20:23 +0000 (15:20 +0100)]
Change the computation of the Extent for Overlay, Fusion and VF
Add an updateDisplayExtent after loadind Overlay, Fusion and VF
tbaudier [Tue, 2 Feb 2016 13:12:54 +0000 (14:12 +0100)]
Merge branch 'VTK6_Qt5' of git.creatis.insa-lyon.fr:clitk into VTK6_Qt5
tbaudier [Tue, 2 Feb 2016 13:10:25 +0000 (14:10 +0100)]
Avoid Warnings with QtDesigner include and Qt5
In vvSlicerManager.cxx: Debug: when opening a second image, all slicer were updated, not only the first
Simon Rit [Tue, 2 Feb 2016 09:53:27 +0000 (10:53 +0100)]
Removed trailing semi-colon
Simon Rit [Tue, 2 Feb 2016 09:53:01 +0000 (10:53 +0100)]
Removed copy paste
tbaudier [Mon, 1 Feb 2016 13:37:09 +0000 (14:37 +0100)]
Merge branch 'VTK6_Qt5' into VTK6_Qt5_LineProfile
tbaudier [Mon, 1 Feb 2016 13:26:20 +0000 (14:26 +0100)]
Ensure the compilation with Qt4 and Qt5
tbaudier [Mon, 1 Feb 2016 07:38:48 +0000 (08:38 +0100)]
Display a line between the 2 profile points.
Debug problem of extent
+ Try to debug the line display with landmark
tbaudier [Wed, 20 Jan 2016 16:06:03 +0000 (17:06 +0100)]
Debug a segmentation fault during exit with an opened Profile window
Add shortcuts for selection of the 2 points for profile (Ctrl+1 or Ctrl+2)
tbaudier [Wed, 20 Jan 2016 11:00:11 +0000 (12:00 +0100)]
Display a line between Profile points
vvSlicer has to inherit from QObject to send signals
tbaudier [Tue, 12 Jan 2016 10:10:34 +0000 (11:10 +0100)]
Merge branch 'VTK6_Qt5_4DROI' into VTK6_Qt5
tbaudier [Tue, 12 Jan 2016 10:10:02 +0000 (11:10 +0100)]
Add remove one selected ROI button
Correct Select All Contour button (ROI) behavior
tbaudier [Thu, 7 Jan 2016 15:25:46 +0000 (16:25 +0100)]
Merge branch 'VTK6_Qt5_4DROI' into VTK6_Qt5
tbaudier [Thu, 7 Jan 2016 15:24:49 +0000 (16:24 +0100)]
Add funtions to Profile tool
Display the two selected points
Save the coordinates in mm
Compute the profile automaticaly
Allow the user to choose the name of the saving file
Prepare for the display of a line between the 2 selected points
tbaudier [Wed, 6 Jan 2016 08:20:38 +0000 (09:20 +0100)]
Debug interactions with the numeric keys
tbaudier [Tue, 5 Jan 2016 15:53:54 +0000 (16:53 +0100)]
Debug display bug with ROI & 4D images
I just untoggled/toggled the ROI's visibility to avoid the problem
But the proble is still there without this tip
tbaudier [Mon, 4 Jan 2016 07:51:54 +0000 (08:51 +0100)]
Merge branch 'VTK6_Qt5_Profile' into VTK6_Qt5
tbaudier [Thu, 31 Dec 2015 08:55:28 +0000 (09:55 +0100)]
Add Delete
tbaudier [Wed, 30 Dec 2015 14:00:48 +0000 (15:00 +0100)]
Add the profile display and the saving a text file
tbaudier [Wed, 23 Dec 2015 14:43:47 +0000 (15:43 +0100)]
Create the line iterator
tbaudier [Wed, 23 Dec 2015 09:58:53 +0000 (10:58 +0100)]
Selection of the 2 points
tbaudier [Tue, 22 Dec 2015 14:07:01 +0000 (15:07 +0100)]
Creation of the Profile Tool
tbaudier [Mon, 21 Dec 2015 15:11:47 +0000 (16:11 +0100)]
Debug slowness of scalar range computation
tbaudier [Tue, 15 Dec 2015 10:35:20 +0000 (11:35 +0100)]
Debug Cancel crop + rigid registration
tbaudier [Tue, 15 Dec 2015 10:33:07 +0000 (11:33 +0100)]
Merge branch 'VTK6_Qt5_Registration' into VTK6_Qt5
tbaudier [Mon, 14 Dec 2015 13:14:03 +0000 (14:14 +0100)]
Debug Rigid Registration
With & Without Overlay/Fusion/VF
tbaudier [Fri, 11 Dec 2015 09:49:17 +0000 (10:49 +0100)]
Redo the Rigid Registration
Without the calculation of the transformation matrix
Works without overlay only, but the crop, ROI, ... still work
tbaudier [Wed, 9 Dec 2015 15:07:22 +0000 (16:07 +0100)]
Remove cout and add a restriction with Qt and VTK Versions
Pre-release version
tbaudier [Wed, 9 Dec 2015 11:08:16 +0000 (12:08 +0100)]
Debug segmentation fault when apply the Crop tool
tbaudier [Wed, 9 Dec 2015 10:57:16 +0000 (11:57 +0100)]
Debug try with ImageReslice update and autoCrop
tbaudier [Tue, 8 Dec 2015 09:07:05 +0000 (10:07 +0100)]
Merge branch 'master' into VTK6_Qt5
tbaudier [Mon, 7 Dec 2015 14:48:23 +0000 (15:48 +0100)]
Debug segmentation fault when cancelling
tbaudier [Mon, 7 Dec 2015 12:40:39 +0000 (13:40 +0100)]
Debug VF/Landmarks + Crop
tbaudier [Mon, 7 Dec 2015 12:30:35 +0000 (13:30 +0100)]
Merge branch 'VTK6_Qt5_VF' into VTK6_Qt5_Crop
tbaudier [Mon, 7 Dec 2015 12:27:31 +0000 (13:27 +0100)]
Remove cout
tbaudier [Mon, 7 Dec 2015 12:16:30 +0000 (13:16 +0100)]
Landmark display debug
Simon Rit [Mon, 7 Dec 2015 12:07:19 +0000 (13:07 +0100)]
Added clitkSum to take the sum in one direction, corrected clitkFooImage
and removed it from compilation
tbaudier [Mon, 7 Dec 2015 08:39:49 +0000 (09:39 +0100)]
Debug VF Display
tbaudier [Fri, 4 Dec 2015 13:51:20 +0000 (14:51 +0100)]
Merge branch 'VTK6_Qt5' into VTK6_Qt5_Crop
tbaudier [Fri, 4 Dec 2015 09:44:15 +0000 (10:44 +0100)]
Merge branch 'VTK6_Qt5_Overlay4D' into VTK6_Qt5_Binarize
tbaudier [Fri, 4 Dec 2015 09:35:34 +0000 (10:35 +0100)]
Merge branch 'VTK6_Qt5' into VTK6_Qt5_Binarize
tbaudier [Fri, 4 Dec 2015 08:55:36 +0000 (09:55 +0100)]
Merge branch 'VTK6_Qt5' into VTK6_Qt5_Overlay4D
tbaudier [Thu, 3 Dec 2015 15:37:42 +0000 (16:37 +0100)]
Change some SetInputData into SetInputConnection to be consistent with algorithm pipeplines
tbaudier [Thu, 3 Dec 2015 14:35:40 +0000 (15:35 +0100)]
Fix the slice modification bug with overlay & fusion
tbaudier [Thu, 3 Dec 2015 08:29:03 +0000 (09:29 +0100)]
The animation with a 4D Overlay works
Add the connection between the Overlay Mapper and the Overlay Reslice in the SetOverlay function
tbaudier [Wed, 2 Dec 2015 11:06:36 +0000 (12:06 +0100)]
Real-time cropping works
tbaudier [Wed, 2 Dec 2015 09:29:15 +0000 (10:29 +0100)]
Merge branch 'VTK6_Qt5' into VTK6_Qt5_Binarize
tbaudier [Wed, 2 Dec 2015 09:08:10 +0000 (10:08 +0100)]
The binarization result is automatically displayed after apply
Change the order of Initialization of Slicers
tbaudier [Tue, 1 Dec 2015 13:18:13 +0000 (14:18 +0100)]
Remove duplicate header include
tbaudier [Tue, 1 Dec 2015 13:10:02 +0000 (14:10 +0100)]
ROI Debug
Add AllVisibleContourROIToggled(true) to avoid contour freezing after initialization
tbaudier [Mon, 30 Nov 2015 13:01:03 +0000 (14:01 +0100)]
ROI Debug
Real-time Display Delay Debug
Add test tool (display a sphere in front of the image)
tbaudier [Fri, 27 Nov 2015 12:48:47 +0000 (13:48 +0100)]
Real-time Display Debug
Add SetOpacity(0.995)
tbaudier [Wed, 25 Nov 2015 10:14:49 +0000 (11:14 +0100)]
Correct Bounds in Input Contour Mapper
Change SetInputData to SetInputConnection
The real-time display doesn't work yet
tbaudier [Mon, 23 Nov 2015 14:41:37 +0000 (15:41 +0100)]
Calculation of Rotation & Translation
Good ?
The slice Number is wrong
tbaudier [Thu, 19 Nov 2015 14:35:02 +0000 (15:35 +0100)]
ROI & Contour Debug Try
tbaudier [Thu, 19 Nov 2015 14:32:27 +0000 (15:32 +0100)]
Crop Debug Try
tbaudier [Thu, 19 Nov 2015 14:29:58 +0000 (15:29 +0100)]
Rigid Registration & Overlay Debug try
tbaudier [Thu, 19 Nov 2015 14:20:57 +0000 (15:20 +0100)]
First Modification for Qt5 & VTK6
Change GetExtent() into DATA_EXTENT or WHOLE_EXTENT according context
Open File Debug
Corner Information Display Debug
Cross Cursor Display Debug
Overlay Debug
Fusion Debug
Rigid Registration Debug (without overlay)
Thomas Cajgfinger [Tue, 29 Sep 2015 14:39:23 +0000 (16:39 +0200)]
Change in headers order
Brent Huisman [Tue, 15 Sep 2015 13:42:23 +0000 (15:42 +0200)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Brent Huisman [Tue, 15 Sep 2015 13:42:01 +0000 (15:42 +0200)]
Modified gate_job_cluster.job to request 3GB by default.
Simon Rit [Tue, 15 Sep 2015 09:39:00 +0000 (11:39 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Tue, 15 Sep 2015 09:38:06 +0000 (11:38 +0200)]
Changed qt git url
Simon Rit [Tue, 15 Sep 2015 09:37:44 +0000 (11:37 +0200)]
Sync RTK files with the RTK public repo
Brent Huisman [Tue, 8 Sep 2015 14:48:23 +0000 (16:48 +0200)]
Merge branch 'master' of git://git.creatis.insa-lyon.fr/clitk
Brent Huisman [Tue, 8 Sep 2015 14:38:42 +0000 (16:38 +0200)]
Added PixelTypeDownCast specialization for double to double 'conversion'.
Simon Rit [Wed, 24 Jun 2015 08:50:44 +0000 (10:50 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Wed, 24 Jun 2015 08:49:06 +0000 (10:49 +0200)]
Fixes for ITK v4.8rc02
Cyril Mory [Wed, 10 Jun 2015 09:13:18 +0000 (11:13 +0200)]
Fixed MatrixTransformToVF's option "--like" with ITK > 4.6
Simon Rit [Fri, 24 Apr 2015 23:43:37 +0000 (01:43 +0200)]
Fix enum define that conflicts with system macro on mac os
Simon Rit [Fri, 24 Apr 2015 22:46:13 +0000 (00:46 +0200)]
Fix for MacOS
David Sarrut [Wed, 25 Feb 2015 09:05:46 +0000 (10:05 +0100)]
More tolerant stat file merging
David Sarrut [Wed, 18 Feb 2015 09:48:47 +0000 (10:48 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
catherine quinones [Thu, 12 Feb 2015 15:04:44 +0000 (16:04 +0100)]
changed #!/usr/bin/env bash to #! /usr/local/bin/bash -lx
catherine quinones [Thu, 12 Feb 2015 15:03:38 +0000 (16:03 +0100)]
changed #!/usr/bin/env bash to #! /usr/local/bin/bash -lx
catherine quinones [Wed, 11 Feb 2015 15:23:27 +0000 (16:23 +0100)]
changed /usr/bin/env to /bin/env and added date before and after the data transfer
catherine quinones [Wed, 11 Feb 2015 11:25:33 +0000 (12:25 +0100)]
changed /usr/bin/env to /bin/env
added date before and after the job data transfer
David Sarrut [Tue, 6 Jan 2015 14:11:34 +0000 (15:11 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Presles Benoît [Tue, 16 Dec 2014 11:01:31 +0000 (12:01 +0100)]
the barycenter tool is the same as the image moment tool - so we delete it
Presles Benoît [Tue, 16 Dec 2014 10:42:37 +0000 (11:42 +0100)]
new tool to calculate the barycenter of a binary image
Simon Rit [Tue, 25 Nov 2014 06:51:24 +0000 (07:51 +0100)]
Improved robustness of ImagX xml file reader
David Sarrut [Tue, 4 Nov 2014 10:33:31 +0000 (11:33 +0100)]
Add dosenormafactor parameter
David Sarrut [Tue, 4 Nov 2014 09:13:25 +0000 (10:13 +0100)]
Correct else position
David Sarrut [Tue, 4 Nov 2014 09:13:02 +0000 (10:13 +0100)]
correct : with ;
David Sarrut [Tue, 4 Nov 2014 09:12:37 +0000 (10:12 +0100)]
protect FATAL macro
Simon Rit [Tue, 21 Oct 2014 05:47:12 +0000 (07:47 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Tue, 21 Oct 2014 05:46:21 +0000 (07:46 +0200)]
Added direction to --like option
Agata Krason [Thu, 16 Oct 2014 16:16:44 +0000 (18:16 +0200)]
Remove unusable code.