]> Creatis software - clitk.git/log
clitk.git
13 years agoRomulo:
delmon [Thu, 10 Mar 2011 16:14:11 +0000 (16:14 +0000)]
Romulo:
- Added functionality to generate the BSpline coefficients during the
registration.
- Added new command-line option --CoeffEveryN (requires --coeff and --verbose)
  - see ggo file
- Created new observer class (as specified by ITK) to catch iteration events
triggered by the optmizer

13 years agoReturn 0.0 if libstatgrab is not used
dsarrut [Thu, 10 Mar 2011 16:02:04 +0000 (16:02 +0000)]
Return 0.0 if libstatgrab is not used

13 years agoReplace vvImage::Pointer with raw pointer for function
dsarrut [Thu, 10 Mar 2011 16:00:09 +0000 (16:00 +0000)]
Replace vvImage::Pointer with raw pointer for function

13 years agoAdd a list of open images to correctly release memory when the tool is closed
dsarrut [Thu, 10 Mar 2011 15:58:54 +0000 (15:58 +0000)]
Add a list of open images to correctly release memory when the tool is closed

13 years agoCosmetic
dsarrut [Thu, 10 Mar 2011 15:58:14 +0000 (15:58 +0000)]
Cosmetic

13 years agoCorrect destructor
dsarrut [Thu, 10 Mar 2011 15:57:09 +0000 (15:57 +0000)]
Correct destructor

13 years agoAdd smartpointer for vtk objects
dsarrut [Thu, 10 Mar 2011 15:56:02 +0000 (15:56 +0000)]
Add smartpointer for vtk objects

13 years ago*** empty log message ***
grevillot [Thu, 10 Mar 2011 07:54:53 +0000 (07:54 +0000)]
*** empty log message ***

13 years agoMake the tool work for all image pixel types
dsarrut [Tue, 8 Mar 2011 12:34:53 +0000 (12:34 +0000)]
Make the tool work for all image pixel types

13 years agoRemoved direct modification of matrix elements which triggered vtk warnings.
srit [Mon, 7 Mar 2011 16:22:06 +0000 (16:22 +0000)]
Removed direct modification of matrix elements which triggered vtk warnings.

13 years agoUndo previous commit: itk MemoryUsageObserver slows down vv
srit [Mon, 7 Mar 2011 12:45:33 +0000 (12:45 +0000)]
Undo previous commit: itk MemoryUsageObserver slows down vv

13 years agoRemove statgrab stuff, prefer portable ITK functions
srit [Fri, 4 Mar 2011 23:56:37 +0000 (23:56 +0000)]
Remove statgrab stuff, prefer portable ITK functions

13 years agoMSVC++ was complaining of shadowed default parameters.
srit [Fri, 4 Mar 2011 23:55:00 +0000 (23:55 +0000)]
MSVC++ was complaining of shadowed default parameters.

13 years agoDon't feel the buffer in GenerateOutputInformation which can be called again after...
srit [Fri, 4 Mar 2011 10:39:32 +0000 (10:39 +0000)]
Don't feel the buffer in GenerateOutputInformation which can be called again after update...

13 years agoConsistent GetScalarComponentAsDouble with the one in vvSlicer
srit [Thu, 3 Mar 2011 16:26:13 +0000 (16:26 +0000)]
Consistent GetScalarComponentAsDouble with the one in vvSlicer

13 years agoPut GetScalarComponentAsDouble with required update in static function for use by...
srit [Thu, 3 Mar 2011 16:20:35 +0000 (16:20 +0000)]
Put GetScalarComponentAsDouble with required update in static function for use by other objects.

13 years agorelease memory when overlay and fusion images are closed
dsarrut [Thu, 3 Mar 2011 15:40:11 +0000 (15:40 +0000)]
release memory when overlay and fusion images are closed
(change NumberOfSlicers by GetNumberOfSlicers)

13 years agoadd memory usage
dsarrut [Thu, 3 Mar 2011 15:38:48 +0000 (15:38 +0000)]
add memory usage

13 years agoput MemoryInfo in mebibytes and not megabytes
dsarrut [Thu, 3 Mar 2011 15:34:47 +0000 (15:34 +0000)]
put MemoryInfo in mebibytes and not megabytes

13 years agoOnly update cursor value when clicking point
srit [Thu, 3 Mar 2011 15:27:27 +0000 (15:27 +0000)]
Only update cursor value when clicking point

13 years agoPropagate new parameters after hitting r
srit [Thu, 3 Mar 2011 14:51:18 +0000 (14:51 +0000)]
Propagate new parameters after hitting r

13 years agoLet the renderer do the computation
srit [Thu, 3 Mar 2011 14:29:05 +0000 (14:29 +0000)]
Let the renderer do the computation

13 years agoCompose transformation in .mat with current transformation
srit [Thu, 3 Mar 2011 14:01:15 +0000 (14:01 +0000)]
Compose transformation in .mat with current transformation

13 years agoAccount for ITK image direction
srit [Thu, 3 Mar 2011 13:26:49 +0000 (13:26 +0000)]
Account for ITK image direction

13 years ago add tooltip for MiB mebibytes / MB megabytes
dsarrut [Thu, 3 Mar 2011 12:56:56 +0000 (12:56 +0000)]
 add tooltip for MiB mebibytes / MB megabytes

13 years ago(oups, remove the debug print) and update the memory each 5 seconds
dsarrut [Thu, 3 Mar 2011 10:33:56 +0000 (10:33 +0000)]
(oups, remove the debug print) and update the memory each 5 seconds

13 years agoremove "required" for flag 'mode'
dsarrut [Thu, 3 Mar 2011 10:18:05 +0000 (10:18 +0000)]
remove "required" for flag 'mode'

13 years agochange flag name "IntermediateSpacing"
dsarrut [Thu, 3 Mar 2011 10:17:35 +0000 (10:17 +0000)]
change flag name "IntermediateSpacing"

13 years agochange default -> do not use cache for contour (bug)
dsarrut [Thu, 3 Mar 2011 10:16:57 +0000 (10:16 +0000)]
change default -> do not use cache for contour (bug)

13 years agoadd memory usage info in panel (need libstatgrab)
dsarrut [Thu, 3 Mar 2011 10:16:29 +0000 (10:16 +0000)]
add memory usage info in panel (need libstatgrab)

13 years agocosmetic
dsarrut [Thu, 3 Mar 2011 10:15:55 +0000 (10:15 +0000)]
cosmetic

13 years agosmall improvement for S8
dsarrut [Thu, 3 Mar 2011 10:15:11 +0000 (10:15 +0000)]
small improvement for S8

13 years agoreplace old resize with new CropLikeImage
dsarrut [Thu, 3 Mar 2011 10:13:16 +0000 (10:13 +0000)]
replace old resize with new CropLikeImage

13 years agoadd "CopyInformation" when crop like another image
dsarrut [Thu, 3 Mar 2011 10:12:42 +0000 (10:12 +0000)]
add "CopyInformation" when crop like another image

13 years agocorrect intermediate spacing flag
dsarrut [Thu, 3 Mar 2011 10:12:12 +0000 (10:12 +0000)]
correct intermediate spacing flag

13 years agoreplace SmartPointer with raw pointer for function (recommended)
dsarrut [Thu, 3 Mar 2011 10:11:38 +0000 (10:11 +0000)]
replace SmartPointer with raw pointer for function (recommended)

13 years agoadd getMemoryUsage
dsarrut [Thu, 3 Mar 2011 10:10:53 +0000 (10:10 +0000)]
add getMemoryUsage

13 years agoRemove useless UpdateReslice
srit [Wed, 2 Mar 2011 18:33:20 +0000 (18:33 +0000)]
Remove useless UpdateReslice

13 years agoUse transform for vvImage objects
srit [Wed, 2 Mar 2011 18:32:36 +0000 (18:32 +0000)]
Use transform for vvImage objects

13 years agoSmall changes, need refactoring
srit [Wed, 2 Mar 2011 18:30:19 +0000 (18:30 +0000)]
Small changes, need refactoring

13 years agoEnable resliced images, put in mTransformedVtkImages
srit [Wed, 2 Mar 2011 18:29:09 +0000 (18:29 +0000)]
Enable resliced images, put in mTransformedVtkImages

13 years agoCommand line options --window --level. Both are required to be accounted for.
srit [Tue, 1 Mar 2011 09:36:17 +0000 (09:36 +0000)]
Command line options --window --level. Both are required to be accounted for.

13 years agoNew functionality: button apply windowing to all images
srit [Mon, 28 Feb 2011 18:24:52 +0000 (18:24 +0000)]
New functionality: button apply windowing to all images

13 years agoAdd tip on image file name with absolute path
srit [Mon, 28 Feb 2011 14:44:44 +0000 (14:44 +0000)]
Add tip on image file name with absolute path

13 years agoChange namespace handling for MSVC++ compilation
srit [Sat, 26 Feb 2011 16:47:18 +0000 (16:47 +0000)]
Change namespace handling for MSVC++ compilation

13 years agoBUG: Add PrintMemory Symbol to clitkCommon even if CLITK_MEMORY_INFO is OFF
delmon [Tue, 22 Feb 2011 08:35:07 +0000 (08:35 +0000)]
BUG: Add PrintMemory Symbol to clitkCommon even if CLITK_MEMORY_INFO is OFF

13 years agoChange preset 3 to 400/20 (like in [Chapet et al])
dsarrut [Tue, 22 Feb 2011 07:17:15 +0000 (07:17 +0000)]
Change preset 3 to 400/20 (like in [Chapet et al])

13 years agoCorrect contours position
dsarrut [Tue, 22 Feb 2011 07:16:28 +0000 (07:16 +0000)]
Correct contours position

13 years agoStation8 almost ok.
dsarrut [Tue, 22 Feb 2011 07:14:00 +0000 (07:14 +0000)]
Station8 almost ok.

13 years agocosmetic
dsarrut [Tue, 22 Feb 2011 07:12:45 +0000 (07:12 +0000)]
cosmetic

13 years agoAdd LabelizeAndCountNumberOfObjects
dsarrut [Tue, 22 Feb 2011 07:12:02 +0000 (07:12 +0000)]
Add LabelizeAndCountNumberOfObjects

13 years agoVivien, Simon stop watching these logs !
dsarrut [Tue, 22 Feb 2011 07:08:15 +0000 (07:08 +0000)]
Vivien, Simon stop watching these logs !

13 years agosmall bugs corrections
dsarrut [Thu, 17 Feb 2011 07:59:06 +0000 (07:59 +0000)]
small bugs corrections

13 years agoadd lineseparation
dsarrut [Thu, 17 Feb 2011 07:57:54 +0000 (07:57 +0000)]
add lineseparation

13 years agoremove extractXXX from compilation
dsarrut [Tue, 15 Feb 2011 11:47:13 +0000 (11:47 +0000)]
remove extractXXX from compilation

13 years agocorrect bug when comment
dsarrut [Tue, 15 Feb 2011 11:34:30 +0000 (11:34 +0000)]
correct bug when comment

13 years agocorrect bug when reload
dsarrut [Tue, 15 Feb 2011 11:33:47 +0000 (11:33 +0000)]
correct bug when reload

13 years agoremove option 'remove'
dsarrut [Tue, 15 Feb 2011 11:33:18 +0000 (11:33 +0000)]
remove option 'remove'

13 years agoremove verbose
dsarrut [Tue, 15 Feb 2011 11:33:00 +0000 (11:33 +0000)]
remove verbose

13 years agomorpho math filter
dsarrut [Tue, 15 Feb 2011 11:31:34 +0000 (11:31 +0000)]
morpho math filter

13 years agoStation8
dsarrut [Tue, 15 Feb 2011 11:31:14 +0000 (11:31 +0000)]
Station8

13 years agoadd cache for read image
dsarrut [Tue, 15 Feb 2011 11:30:53 +0000 (11:30 +0000)]
add cache for read image

13 years agocosmetic
dsarrut [Tue, 15 Feb 2011 11:29:59 +0000 (11:29 +0000)]
cosmetic

13 years agocorrect options scheme
dsarrut [Tue, 15 Feb 2011 11:29:37 +0000 (11:29 +0000)]
correct options scheme

13 years agoadd options
dsarrut [Tue, 15 Feb 2011 11:29:05 +0000 (11:29 +0000)]
add options

13 years agoadd default filename + exception on error
dsarrut [Tue, 15 Feb 2011 11:28:40 +0000 (11:28 +0000)]
add default filename + exception on error

13 years agoadd lib dependence to some tools
dsarrut [Tue, 15 Feb 2011 10:52:41 +0000 (10:52 +0000)]
add lib dependence to some tools

13 years agoadd options ('keep object', 'inverse', verbose etc)
dsarrut [Tue, 15 Feb 2011 10:51:53 +0000 (10:51 +0000)]
add options ('keep object', 'inverse', verbose etc)

13 years agocorrection orientation, add 'keep object' option
dsarrut [Tue, 15 Feb 2011 10:51:03 +0000 (10:51 +0000)]
correction orientation, add 'keep object' option

13 years agoadd 'border' option
dsarrut [Tue, 15 Feb 2011 10:46:13 +0000 (10:46 +0000)]
add 'border' option

13 years agoadd 'OR' operation
dsarrut [Tue, 15 Feb 2011 10:45:37 +0000 (10:45 +0000)]
add 'OR' operation

13 years agoadd missing "allocate"
dsarrut [Tue, 15 Feb 2011 10:45:04 +0000 (10:45 +0000)]
add missing "allocate"

13 years agoadd findExtrema, jointSlices
dsarrut [Tue, 15 Feb 2011 10:44:32 +0000 (10:44 +0000)]
add findExtrema, jointSlices

13 years agosimplify, correct default
dsarrut [Tue, 15 Feb 2011 10:44:07 +0000 (10:44 +0000)]
simplify, correct default

13 years agoadd option to display memory usage if statgrab is installed
dsarrut [Tue, 15 Feb 2011 10:41:19 +0000 (10:41 +0000)]
add option to display memory usage if statgrab is installed
add fromString to convert numbers from String

13 years agocorrect bug in string copy
dsarrut [Tue, 15 Feb 2011 10:40:15 +0000 (10:40 +0000)]
correct bug in string copy

13 years agoadd verbose memory
dsarrut [Tue, 15 Feb 2011 10:39:55 +0000 (10:39 +0000)]
add verbose memory

13 years agoremove debug comment
dsarrut [Tue, 15 Feb 2011 10:39:06 +0000 (10:39 +0000)]
remove debug comment

13 years agocosmetic
dsarrut [Tue, 15 Feb 2011 10:38:47 +0000 (10:38 +0000)]
cosmetic

13 years agoadd option to display memory usage if statgrab is installed
dsarrut [Tue, 15 Feb 2011 10:38:29 +0000 (10:38 +0000)]
add option to display memory usage if statgrab is installed

13 years ago*** empty log message ***
dsarrut [Tue, 15 Feb 2011 10:37:27 +0000 (10:37 +0000)]
*** empty log message ***

13 years ago*** empty log message ***
bouilhol [Tue, 15 Feb 2011 09:46:09 +0000 (09:46 +0000)]
*** empty log message ***

13 years agoRemove bug introduced in previeous patch about initial coeficients
delmon [Wed, 26 Jan 2011 12:58:23 +0000 (12:58 +0000)]
Remove bug introduced in previeous patch about initial coeficients

13 years ago*** empty log message ***
bouilhol [Thu, 20 Jan 2011 16:30:03 +0000 (16:30 +0000)]
*** empty log message ***

13 years ago*** empty log message ***
bouilhol [Wed, 19 Jan 2011 21:48:18 +0000 (21:48 +0000)]
*** empty log message ***

13 years agoAbort if no phase found
bouilhol [Wed, 19 Jan 2011 20:47:09 +0000 (20:47 +0000)]
Abort if no phase found

13 years agoRemoved specific autoscale for unsigned_char and short
srit [Mon, 17 Jan 2011 14:48:58 +0000 (14:48 +0000)]
Removed specific autoscale for unsigned_char and short

13 years agoUse MultipleBSplineDeformableTransform instead of BSplineDeformableTransform in
delmon [Tue, 11 Jan 2011 10:40:18 +0000 (10:40 +0000)]
Use MultipleBSplineDeformableTransform instead of BSplineDeformableTransform in
clitkBLUTDIR, allowing the user to register different regions of an image at
the same time.

13 years agoAdd a boolean to Reset the jacobian memory just when it is needed.
delmon [Tue, 11 Jan 2011 10:37:42 +0000 (10:37 +0000)]
Add a boolean to Reset the jacobian memory just when it is needed.
Add SetJacobianImageData and friendship with MultipleBSplineDeformableTransform
to facilitate and optimise wrapping.

13 years agoAdd a new Transformation that wraps multiple BSplineDeformableTransform to be
delmon [Tue, 11 Jan 2011 10:25:42 +0000 (10:25 +0000)]
Add a new Transformation that wraps multiple BSplineDeformableTransform to be
able to optimize them at the same time.

13 years agoResample mask to overcome the bug with mask that doesn't have the same
delmon [Thu, 6 Jan 2011 09:13:37 +0000 (09:13 +0000)]
Resample mask to overcome the bug with mask that doesn't have the same
resolution as the fixed image.

14 years agoToggle interpolation for fusion and overlay actors to (when applicable)
srit [Thu, 16 Dec 2010 18:04:21 +0000 (18:04 +0000)]
Toggle interpolation for fusion and overlay actors to (when applicable)

14 years agoUse itkLabelGeometryImageFilter instead of itkLabelStatisticsImageFilter it
delmon [Thu, 16 Dec 2010 14:51:47 +0000 (14:51 +0000)]
Use itkLabelGeometryImageFilter instead of itkLabelStatisticsImageFilter it
seems more intuitive to extract a bounding box and propably less expensive.

14 years agovarious update
dsarrut [Wed, 15 Dec 2010 09:05:00 +0000 (09:05 +0000)]
various update

14 years agotest
dsarrut [Wed, 15 Dec 2010 09:04:29 +0000 (09:04 +0000)]
test

14 years agobetter manage resizing roi tool
dsarrut [Wed, 15 Dec 2010 08:55:40 +0000 (08:55 +0000)]
better manage resizing roi tool

14 years agovarious update
dsarrut [Wed, 15 Dec 2010 08:54:58 +0000 (08:54 +0000)]
various update

14 years agoadd short type
dsarrut [Wed, 15 Dec 2010 08:54:35 +0000 (08:54 +0000)]
add short type

14 years agoadd test
dsarrut [Wed, 15 Dec 2010 08:54:23 +0000 (08:54 +0000)]
add test

14 years agoadd enlarge capability
dsarrut [Wed, 15 Dec 2010 08:54:02 +0000 (08:54 +0000)]
add enlarge capability