]> Creatis software - clitk.git/log
clitk.git
13 years agoadd options
dsarrut [Tue, 15 Feb 2011 11:29:05 +0000 (11:29 +0000)]
add options

13 years agoadd default filename + exception on error
dsarrut [Tue, 15 Feb 2011 11:28:40 +0000 (11:28 +0000)]
add default filename + exception on error

13 years agoadd lib dependence to some tools
dsarrut [Tue, 15 Feb 2011 10:52:41 +0000 (10:52 +0000)]
add lib dependence to some tools

13 years agoadd options ('keep object', 'inverse', verbose etc)
dsarrut [Tue, 15 Feb 2011 10:51:53 +0000 (10:51 +0000)]
add options ('keep object', 'inverse', verbose etc)

13 years agocorrection orientation, add 'keep object' option
dsarrut [Tue, 15 Feb 2011 10:51:03 +0000 (10:51 +0000)]
correction orientation, add 'keep object' option

13 years agoadd 'border' option
dsarrut [Tue, 15 Feb 2011 10:46:13 +0000 (10:46 +0000)]
add 'border' option

13 years agoadd 'OR' operation
dsarrut [Tue, 15 Feb 2011 10:45:37 +0000 (10:45 +0000)]
add 'OR' operation

13 years agoadd missing "allocate"
dsarrut [Tue, 15 Feb 2011 10:45:04 +0000 (10:45 +0000)]
add missing "allocate"

13 years agoadd findExtrema, jointSlices
dsarrut [Tue, 15 Feb 2011 10:44:32 +0000 (10:44 +0000)]
add findExtrema, jointSlices

13 years agosimplify, correct default
dsarrut [Tue, 15 Feb 2011 10:44:07 +0000 (10:44 +0000)]
simplify, correct default

13 years agoadd option to display memory usage if statgrab is installed
dsarrut [Tue, 15 Feb 2011 10:41:19 +0000 (10:41 +0000)]
add option to display memory usage if statgrab is installed
add fromString to convert numbers from String

13 years agocorrect bug in string copy
dsarrut [Tue, 15 Feb 2011 10:40:15 +0000 (10:40 +0000)]
correct bug in string copy

13 years agoadd verbose memory
dsarrut [Tue, 15 Feb 2011 10:39:55 +0000 (10:39 +0000)]
add verbose memory

13 years agoremove debug comment
dsarrut [Tue, 15 Feb 2011 10:39:06 +0000 (10:39 +0000)]
remove debug comment

13 years agocosmetic
dsarrut [Tue, 15 Feb 2011 10:38:47 +0000 (10:38 +0000)]
cosmetic

13 years agoadd option to display memory usage if statgrab is installed
dsarrut [Tue, 15 Feb 2011 10:38:29 +0000 (10:38 +0000)]
add option to display memory usage if statgrab is installed

13 years ago*** empty log message ***
dsarrut [Tue, 15 Feb 2011 10:37:27 +0000 (10:37 +0000)]
*** empty log message ***

13 years ago*** empty log message ***
bouilhol [Tue, 15 Feb 2011 09:46:09 +0000 (09:46 +0000)]
*** empty log message ***

13 years agoRemove bug introduced in previeous patch about initial coeficients
delmon [Wed, 26 Jan 2011 12:58:23 +0000 (12:58 +0000)]
Remove bug introduced in previeous patch about initial coeficients

13 years ago*** empty log message ***
bouilhol [Thu, 20 Jan 2011 16:30:03 +0000 (16:30 +0000)]
*** empty log message ***

13 years ago*** empty log message ***
bouilhol [Wed, 19 Jan 2011 21:48:18 +0000 (21:48 +0000)]
*** empty log message ***

13 years agoAbort if no phase found
bouilhol [Wed, 19 Jan 2011 20:47:09 +0000 (20:47 +0000)]
Abort if no phase found

13 years agoRemoved specific autoscale for unsigned_char and short
srit [Mon, 17 Jan 2011 14:48:58 +0000 (14:48 +0000)]
Removed specific autoscale for unsigned_char and short

13 years agoUse MultipleBSplineDeformableTransform instead of BSplineDeformableTransform in
delmon [Tue, 11 Jan 2011 10:40:18 +0000 (10:40 +0000)]
Use MultipleBSplineDeformableTransform instead of BSplineDeformableTransform in
clitkBLUTDIR, allowing the user to register different regions of an image at
the same time.

13 years agoAdd a boolean to Reset the jacobian memory just when it is needed.
delmon [Tue, 11 Jan 2011 10:37:42 +0000 (10:37 +0000)]
Add a boolean to Reset the jacobian memory just when it is needed.
Add SetJacobianImageData and friendship with MultipleBSplineDeformableTransform
to facilitate and optimise wrapping.

13 years agoAdd a new Transformation that wraps multiple BSplineDeformableTransform to be
delmon [Tue, 11 Jan 2011 10:25:42 +0000 (10:25 +0000)]
Add a new Transformation that wraps multiple BSplineDeformableTransform to be
able to optimize them at the same time.

13 years agoResample mask to overcome the bug with mask that doesn't have the same
delmon [Thu, 6 Jan 2011 09:13:37 +0000 (09:13 +0000)]
Resample mask to overcome the bug with mask that doesn't have the same
resolution as the fixed image.

14 years agoToggle interpolation for fusion and overlay actors to (when applicable)
srit [Thu, 16 Dec 2010 18:04:21 +0000 (18:04 +0000)]
Toggle interpolation for fusion and overlay actors to (when applicable)

14 years agoUse itkLabelGeometryImageFilter instead of itkLabelStatisticsImageFilter it
delmon [Thu, 16 Dec 2010 14:51:47 +0000 (14:51 +0000)]
Use itkLabelGeometryImageFilter instead of itkLabelStatisticsImageFilter it
seems more intuitive to extract a bounding box and propably less expensive.

14 years agovarious update
dsarrut [Wed, 15 Dec 2010 09:05:00 +0000 (09:05 +0000)]
various update

14 years agotest
dsarrut [Wed, 15 Dec 2010 09:04:29 +0000 (09:04 +0000)]
test

14 years agobetter manage resizing roi tool
dsarrut [Wed, 15 Dec 2010 08:55:40 +0000 (08:55 +0000)]
better manage resizing roi tool

14 years agovarious update
dsarrut [Wed, 15 Dec 2010 08:54:58 +0000 (08:54 +0000)]
various update

14 years agoadd short type
dsarrut [Wed, 15 Dec 2010 08:54:35 +0000 (08:54 +0000)]
add short type

14 years agoadd test
dsarrut [Wed, 15 Dec 2010 08:54:23 +0000 (08:54 +0000)]
add test

14 years agoadd enlarge capability
dsarrut [Wed, 15 Dec 2010 08:54:02 +0000 (08:54 +0000)]
add enlarge capability

14 years agoadd crop flag
dsarrut [Wed, 15 Dec 2010 08:53:36 +0000 (08:53 +0000)]
add crop flag

14 years agoadd relativeposition tool
dsarrut [Wed, 15 Dec 2010 08:52:56 +0000 (08:52 +0000)]
add relativeposition tool

14 years agoremove debug
dsarrut [Wed, 15 Dec 2010 08:50:49 +0000 (08:50 +0000)]
remove debug

14 years agoremove debug, new orientation option
dsarrut [Wed, 15 Dec 2010 08:50:00 +0000 (08:50 +0000)]
remove debug, new orientation option

14 years agonew crop like (allow to enlarge image)
dsarrut [Wed, 15 Dec 2010 08:49:14 +0000 (08:49 +0000)]
new crop like (allow to enlarge image)

14 years agoresizeImageLike
dsarrut [Wed, 15 Dec 2010 08:48:55 +0000 (08:48 +0000)]
resizeImageLike

14 years agoadd autocrop and options
dsarrut [Wed, 15 Dec 2010 08:48:37 +0000 (08:48 +0000)]
add autocrop and options

14 years agocosmetic
dsarrut [Wed, 15 Dec 2010 08:48:03 +0000 (08:48 +0000)]
cosmetic

14 years agoadd exception if error
dsarrut [Wed, 15 Dec 2010 08:47:28 +0000 (08:47 +0000)]
add exception if error

14 years agoManually add a dependency on clitkAffineRegistration_ggo.h for
delmon [Wed, 8 Dec 2010 16:54:56 +0000 (16:54 +0000)]
Manually add a dependency on clitkAffineRegistration_ggo.h for
clitkGenericAffineTransform.cxx in order to include the rule to generate it in
the makefile.

14 years agoAdd missing ifdef ITK_USE_OPTIMISED_REGISTRATION_METHODS present in the H file
delmon [Wed, 8 Dec 2010 14:06:06 +0000 (14:06 +0000)]
Add missing ifdef ITK_USE_OPTIMISED_REGISTRATION_METHODS present in the H file
but not in the TXX file.

14 years agoRemoved unfinished work of Jef
srit [Mon, 6 Dec 2010 15:40:02 +0000 (15:40 +0000)]
Removed unfinished work of Jef

14 years agoCopy to "unsorted" directory if dicom key not found
bouilhol [Wed, 24 Nov 2010 13:49:01 +0000 (13:49 +0000)]
Copy to "unsorted" directory if dicom key not found

14 years agoworks even if there are several "/" "\" or "*" in the dicom field and even if there...
bouilhol [Mon, 22 Nov 2010 17:35:42 +0000 (17:35 +0000)]
works even if there are several "/" "\" or "*" in the dicom field and even if there are several fields with the same name

14 years agoworks with the new create_mhd_4D.sh
bouilhol [Mon, 22 Nov 2010 17:32:47 +0000 (17:32 +0000)]
works with the new create_mhd_4D.sh

14 years agodon't crash if ther is a "/" in the dicom field
bouilhol [Tue, 9 Nov 2010 13:52:35 +0000 (13:52 +0000)]
don't crash if ther is a "/" in the dicom field

14 years agoclitkDicomToImage added to clitk3
bouilhol [Fri, 5 Nov 2010 00:04:59 +0000 (00:04 +0000)]
clitkDicomToImage added to clitk3

14 years agoCorrected erroneous free when a real RECTILINEAR field is detected
srit [Thu, 4 Nov 2010 18:22:44 +0000 (18:22 +0000)]
Corrected erroneous free when a real RECTILINEAR field is detected

14 years ago*** empty log message ***
bouilhol [Tue, 26 Oct 2010 15:25:44 +0000 (15:25 +0000)]
*** empty log message ***

14 years ago*** empty log message ***
bouilhol [Tue, 26 Oct 2010 14:39:05 +0000 (14:39 +0000)]
*** empty log message ***

14 years agotemporal median of a sequence of images, to be used for the mid P project
schaerer [Tue, 26 Oct 2010 13:43:54 +0000 (13:43 +0000)]
temporal median of a sequence of images, to be used for the mid P project

14 years agoMIP tool using David's framework
schaerer [Tue, 26 Oct 2010 12:37:54 +0000 (12:37 +0000)]
MIP tool using David's framework

14 years agoRemoved warning
srit [Mon, 25 Oct 2010 16:27:49 +0000 (16:27 +0000)]
Removed warning

14 years agoRemoved vc2010 warnings
srit [Mon, 25 Oct 2010 16:21:29 +0000 (16:21 +0000)]
Removed vc2010 warnings

14 years agocli tool for mip computation
schaerer [Mon, 25 Oct 2010 14:34:24 +0000 (14:34 +0000)]
cli tool for mip computation

14 years agoremove useless txx
schaerer [Mon, 25 Oct 2010 13:58:33 +0000 (13:58 +0000)]
remove useless txx

14 years agoRemoved exception handling at a low level, let them be handled at a higher, e.g....
srit [Sun, 24 Oct 2010 18:49:45 +0000 (18:49 +0000)]
Removed exception handling at a low level, let them be handled at a higher, e.g. with qt errors. Only update itk pipeline for reading in vvImage to avoid reading unnecessary parts of the image.

14 years agofix warning
schaerer [Sun, 24 Oct 2010 10:22:11 +0000 (10:22 +0000)]
fix warning

14 years agoMS compiler compatibility issues
srit [Fri, 22 Oct 2010 16:06:20 +0000 (16:06 +0000)]
MS compiler compatibility issues

14 years agomake difference between 2D and 3D with a single slice image (Dim obtained from ITK...
dsarrut [Fri, 22 Oct 2010 08:40:20 +0000 (08:40 +0000)]
make difference between 2D and 3D with a single slice image (Dim obtained from ITK reader)

14 years agoDB of anatomical features
dsarrut [Fri, 22 Oct 2010 07:56:30 +0000 (07:56 +0000)]
DB of anatomical features

14 years agonew FillMask with itk filter
dsarrut [Fri, 22 Oct 2010 07:56:13 +0000 (07:56 +0000)]
new FillMask with itk filter

14 years agodummy ui
dsarrut [Fri, 22 Oct 2010 07:43:56 +0000 (07:43 +0000)]
dummy ui

14 years agoadd slider for temporal dim (not used)
dsarrut [Fri, 22 Oct 2010 07:42:49 +0000 (07:42 +0000)]
add slider for temporal dim (not used)

14 years agocompile all tools
dsarrut [Fri, 22 Oct 2010 07:42:20 +0000 (07:42 +0000)]
compile all tools

14 years agoremove debug
dsarrut [Fri, 22 Oct 2010 07:40:34 +0000 (07:40 +0000)]
remove debug

14 years agoauto init args ggo
dsarrut [Fri, 22 Oct 2010 07:40:20 +0000 (07:40 +0000)]
auto init args ggo

14 years agoupdated crop image with itk filter (and no vtk)
dsarrut [Fri, 22 Oct 2010 07:40:04 +0000 (07:40 +0000)]
updated crop image with itk filter (and no vtk)

14 years agocosmetic
dsarrut [Fri, 22 Oct 2010 07:38:05 +0000 (07:38 +0000)]
cosmetic

14 years agosmall improvement
dsarrut [Fri, 22 Oct 2010 07:37:10 +0000 (07:37 +0000)]
small improvement

14 years agonew FillMask with itk filter
dsarrut [Fri, 22 Oct 2010 07:36:34 +0000 (07:36 +0000)]
new FillMask with itk filter

14 years agoremove debug messages
dsarrut [Fri, 22 Oct 2010 07:36:07 +0000 (07:36 +0000)]
remove debug messages

14 years agoadd clitkExceptionMacro
dsarrut [Fri, 22 Oct 2010 07:35:31 +0000 (07:35 +0000)]
add clitkExceptionMacro

14 years agosimplified image pointer (const/non const)
dsarrut [Fri, 22 Oct 2010 07:34:46 +0000 (07:34 +0000)]
simplified image pointer (const/non const)

14 years agonew CropImage with AutoCrop and CropLike
dsarrut [Fri, 22 Oct 2010 07:33:59 +0000 (07:33 +0000)]
new CropImage with AutoCrop and CropLike

14 years agoremove itk:ostringstream dependence
dsarrut [Fri, 22 Oct 2010 07:33:19 +0000 (07:33 +0000)]
remove itk:ostringstream dependence

14 years agocosmetic
dsarrut [Fri, 22 Oct 2010 07:32:54 +0000 (07:32 +0000)]
cosmetic

14 years agomake explicit write/read on disk
dsarrut [Fri, 22 Oct 2010 07:19:27 +0000 (07:19 +0000)]
make explicit write/read on disk

14 years agoremove unused
dsarrut [Fri, 22 Oct 2010 07:19:04 +0000 (07:19 +0000)]
remove unused

14 years agocosmetic
dsarrut [Fri, 22 Oct 2010 07:18:37 +0000 (07:18 +0000)]
cosmetic

14 years agofix warning
schaerer [Thu, 21 Oct 2010 16:02:37 +0000 (16:02 +0000)]
fix warning

14 years agoImplemented alternative to former split: split on open.
srit [Thu, 21 Oct 2010 12:56:57 +0000 (12:56 +0000)]
Implemented alternative to former split: split on open.

14 years agoImplemented new vvImage scheme: the itk to vtk image converter is now kept as a class...
srit [Wed, 20 Oct 2010 15:01:03 +0000 (15:01 +0000)]
Implemented new vvImage scheme: the itk to vtk image converter is now kept as a class member for improved memory handling.

14 years agoRemoved action split image from menu, will be reimplemented as a read option
srit [Wed, 20 Oct 2010 14:59:13 +0000 (14:59 +0000)]
Removed action split image from menu, will be reimplemented as a read option

14 years agoDisable tools crop and rigid registration
srit [Wed, 20 Oct 2010 14:56:47 +0000 (14:56 +0000)]
Disable tools crop and rigid registration

14 years agoitkv4 compatibility
schaerer [Wed, 20 Oct 2010 13:34:18 +0000 (13:34 +0000)]
itkv4 compatibility

14 years agospace-proofness
schaerer [Tue, 19 Oct 2010 13:08:05 +0000 (13:08 +0000)]
space-proofness

14 years agoCorrected use of vtkSmartPointers and mistakes in constructor / destructor
srit [Fri, 15 Oct 2010 15:37:37 +0000 (15:37 +0000)]
Corrected use of vtkSmartPointers and mistakes in constructor / destructor

14 years agoadd clitkCommon.h
dsarrut [Fri, 15 Oct 2010 06:15:46 +0000 (06:15 +0000)]
add clitkCommon.h

14 years ago-add dependencies for all autotools
dsarrut [Fri, 15 Oct 2010 06:15:21 +0000 (06:15 +0000)]
-add dependencies for all autotools

14 years agofix linking problem
schaerer [Thu, 14 Oct 2010 13:33:00 +0000 (13:33 +0000)]
fix linking problem

14 years agochange include (itkMacro) to help compilation with ITK4
dsarrut [Thu, 14 Oct 2010 09:53:54 +0000 (09:53 +0000)]
change include (itkMacro) to help compilation with ITK4

14 years agomechanism for handling tool dependencies in a modular way.
schaerer [Wed, 13 Oct 2010 15:20:04 +0000 (15:20 +0000)]
mechanism for handling tool dependencies in a modular way.

We still need to describe those dependencies more finely

14 years agoseparate tools from the rest
schaerer [Wed, 13 Oct 2010 15:06:56 +0000 (15:06 +0000)]
separate tools from the rest