]> Creatis software - clitk.git/log
clitk.git
11 years agosimplify query/retrieve calls
cervenansky [Tue, 16 Jul 2013 10:08:50 +0000 (12:08 +0200)]
simplify query/retrieve calls

11 years agocleanup
cervenansky [Mon, 15 Jul 2013 12:45:33 +0000 (14:45 +0200)]
cleanup

11 years agoAdd patient ID and patient name search available.
cervenansky [Mon, 15 Jul 2013 12:36:37 +0000 (14:36 +0200)]
Add patient ID and patient name search available.

11 years agoset VV Dicom client parameter
cervenansky [Mon, 15 Jul 2013 08:51:02 +0000 (10:51 +0200)]
set VV Dicom client parameter

11 years agomove works for patient retrieve.
cervenansky [Fri, 12 Jul 2013 14:07:11 +0000 (16:07 +0200)]
move works for patient retrieve.
Need to work around to smooth things.

11 years agoremove double patients in PatientTree
cervenansky [Tue, 9 Jul 2013 09:26:58 +0000 (11:26 +0200)]
remove double patients in PatientTree

11 years agomodify settings save
cervenansky [Tue, 9 Jul 2013 09:14:19 +0000 (11:14 +0200)]
modify settings save

11 years agopacs only if clitk_use_system_gdcm is defined
cervenansky [Fri, 5 Jul 2013 15:20:49 +0000 (17:20 +0200)]
pacs only if clitk_use_system_gdcm is defined

11 years agoAdd pacs classes
cervenansky [Fri, 5 Jul 2013 14:27:40 +0000 (16:27 +0200)]
Add pacs classes

11 years agoon_importData
cervenansky [Fri, 5 Jul 2013 14:21:40 +0000 (16:21 +0200)]
on_importData

11 years agoImagesModel correction
cervenansky [Fri, 5 Jul 2013 12:44:30 +0000 (14:44 +0200)]
ImagesModel correction

11 years agoSettings dialog to add new dicom server
cervenansky [Fri, 5 Jul 2013 12:19:47 +0000 (14:19 +0200)]
Settings dialog to add new dicom server

11 years agoDicom server connection
cervenansky [Fri, 5 Jul 2013 12:18:43 +0000 (14:18 +0200)]
Dicom server connection

11 years agocorrections for recent version of gdcm
cervenansky [Mon, 1 Jul 2013 07:36:22 +0000 (09:36 +0200)]
corrections for recent version of gdcm

11 years agoCompile PACS stuff only if GDCM system is used
Simon Rit [Fri, 28 Jun 2013 09:03:09 +0000 (11:03 +0200)]
Compile PACS stuff only if GDCM system is used

11 years agofirst developments for PacsConnection
cervenansky [Fri, 28 Jun 2013 08:24:10 +0000 (10:24 +0200)]
first developments for PacsConnection

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Wed, 12 Jun 2013 14:33:34 +0000 (16:33 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoFix reload bug
David Sarrut [Wed, 12 Jun 2013 09:36:18 +0000 (11:36 +0200)]
Fix reload bug

11 years agoCheck if it is really a rt-struct dicom before opening it
David Sarrut [Wed, 12 Jun 2013 09:35:59 +0000 (11:35 +0200)]
Check if it is really a rt-struct dicom before opening it

11 years agoCopy pasted code from overlay to fusion for sequences. This yet another
Simon Rit [Wed, 12 Jun 2013 08:28:37 +0000 (10:28 +0200)]
Copy pasted code from overlay to fusion for sequences. This yet another
illustration that fusion and overlay are essentially the same. This should
replace the function of Remi, SetFusionSequence. All this is to be done...

11 years agoFixed wrong commit on this file
Simon Rit [Fri, 7 Jun 2013 15:09:39 +0000 (17:09 +0200)]
Fixed wrong commit on this file

11 years agoFixed script for my mac
Simon Rit [Fri, 7 Jun 2013 15:08:08 +0000 (17:08 +0200)]
Fixed script for my mac

11 years agoTurns out that there were 2 make_new_tool.sh. Obviously I had taken the
Simon Rit [Fri, 7 Jun 2013 15:02:08 +0000 (17:02 +0200)]
Turns out that there were 2 make_new_tool.sh. Obviously I had taken the
wrong one for the last 2 tools I've done...

11 years agoAdded new tool to change image information. Replaces deprecated tools
Simon Rit [Fri, 7 Jun 2013 15:00:48 +0000 (17:00 +0200)]
Added new tool to change image information. Replaces deprecated tools
clitkSetOrigin and clitkSetSpacing + new Direction functionality

11 years agoRemoved clitkMakeSphereImage because it is available in RTK and we don't
Simon Rit [Fri, 7 Jun 2013 09:26:20 +0000 (11:26 +0200)]
Removed clitkMakeSphereImage because it is available in RTK and we don't
want to support several tools doing the same thing

11 years agoNew clitkAnistropicDiffusionFilter for ESRF team
Simon Rit [Thu, 6 Jun 2013 17:04:19 +0000 (19:04 +0200)]
New clitkAnistropicDiffusionFilter for ESRF team

11 years agoAllow execution
Simon Rit [Thu, 6 Jun 2013 16:12:20 +0000 (18:12 +0200)]
Allow execution

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Thu, 6 Jun 2013 16:12:08 +0000 (18:12 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoAttempt to clean the gdcm mess. At least one include was missing when using the packa...
Simon Rit [Thu, 6 Jun 2013 13:59:51 +0000 (15:59 +0200)]
Attempt to clean the gdcm mess. At least one include was missing when using the package. Note that clitkCommon is linked to ITK and VTK libraries so there is no reason to add ITK_LIBRARIES or VTK_LIBRARIES when linking to clitkCommon.

11 years agoAllow no -i in clitkImageStatistics
Simon Rit [Thu, 6 Jun 2013 10:25:43 +0000 (12:25 +0200)]
Allow no -i in clitkImageStatistics

11 years agoMissing update prevented png to work
Simon Rit [Thu, 6 Jun 2013 10:18:25 +0000 (12:18 +0200)]
Missing update prevented png to work

11 years agoAdd gdcm dependencies
David Sarrut [Tue, 4 Jun 2013 14:51:39 +0000 (16:51 +0200)]
Add gdcm dependencies

11 years agoInclude lib gdcm in each subfolder
David Sarrut [Tue, 4 Jun 2013 14:43:00 +0000 (16:43 +0200)]
Include lib gdcm in each subfolder

11 years agoitk3 compatibility
David Sarrut [Tue, 4 Jun 2013 11:37:49 +0000 (13:37 +0200)]
itk3 compatibility

11 years agomove from test_dav to tools
David Sarrut [Tue, 4 Jun 2013 09:26:10 +0000 (11:26 +0200)]
move from test_dav to tools

11 years agoFirst working version (allow to write rt-struct)
David Sarrut [Tue, 4 Jun 2013 09:07:46 +0000 (11:07 +0200)]
First working version (allow to write rt-struct)

11 years agoFirst version of clitkImage2DicomRTStruct
David Sarrut [Mon, 3 Jun 2013 11:55:25 +0000 (13:55 +0200)]
First version of clitkImage2DicomRTStruct

11 years agoMoved from repository clitk to clitk.private/tests_dav
David Sarrut [Fri, 3 Feb 2012 07:13:51 +0000 (08:13 +0100)]
Moved from repository clitk to clitk.private/tests_dav

11 years agoFirst working version (allow to write rt-struct)
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
First working version (allow to write rt-struct)

11 years agoMerge branch 'rtstruct-with-itk4'
David Sarrut [Tue, 4 Jun 2013 08:24:32 +0000 (10:24 +0200)]
Merge branch 'rtstruct-with-itk4'

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Tue, 4 Jun 2013 08:24:12 +0000 (10:24 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoRemove debug
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove debug

11 years agoPrevent to use deprecated function
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Prevent to use deprecated function

11 years agoRemove debug.
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove debug.

11 years agoPrevent to reload if contours from dicom-rt-struct
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Prevent to reload if contours from dicom-rt-struct

11 years agocosmetic
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
cosmetic

11 years agoRemove debug verbose
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove debug verbose

11 years agoRemove open dicom struct -> use tool ROI instead
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove open dicom struct -> use tool ROI instead

11 years agoRemove open dicomstruct -> use tool ROI instead
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove open dicomstruct -> use tool ROI instead

11 years agoRemove debug verbose
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove debug verbose

11 years agoAdd GDCM lib
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add GDCM lib

11 years agoFirst version to convert image to dicomrtstruct
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
First version to convert image to dicomrtstruct

11 years agoRemove gdcm dep
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove gdcm dep

11 years agoRemove debug
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove debug

11 years agoUse vtkGDCMPolyDataReader to read mesh
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Use vtkGDCMPolyDataReader to read mesh

11 years agoIndicate that shift cuold be used on mac to grab image
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Indicate that shift cuold be used on mac to grab image

11 years agoAllow to combine multiple elastix transfo
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Allow to combine multiple elastix transfo

11 years agoCompile with both itk3 and itk4
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Compile with both itk3 and itk4

11 years agoremove file present in (system) gdcm
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
remove file present in (system) gdcm

11 years agoRead with vtkGDCMPolyDataReader
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Read with vtkGDCMPolyDataReader

11 years agoRead dicom-rt with vtkGDCMPolyDataReader
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Read dicom-rt with vtkGDCMPolyDataReader

11 years agoAdd gdcm lib is compiled with system gdcm
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add gdcm lib is compiled with system gdcm

11 years agoCheck if itk was compiled with system_gdcm
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Check if itk was compiled with system_gdcm

11 years agoRemove unused option
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove unused option

11 years agoChange tool description
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Change tool description

11 years agoReplace old gdcm code with vtkGDCMPolyData
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Replace old gdcm code with vtkGDCMPolyData

11 years agofor vvToolROIManager, add link with gdcm-vtk
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
for vvToolROIManager, add link with gdcm-vtk

11 years agoCheck if use system gdcm to include vtkGDCMPolyData
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Check if use system gdcm to include vtkGDCMPolyData

11 years agoRemove verbose debug
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Remove verbose debug

11 years agoAdd variable CLITK_USE_SYSTEM_GDCM
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add variable CLITK_USE_SYSTEM_GDCM

11 years agoAdd libvtkgdcm to clitkDicomRTStructLib
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add libvtkgdcm to clitkDicomRTStructLib

11 years agoAdd option to link with external gdcm (forrt-struct + itk4)
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add option to link with external gdcm (forrt-struct + itk4)

11 years agoRemove multiple input option (was not doing what it said) and added the
Simon Rit [Mon, 27 May 2013 06:02:17 +0000 (08:02 +0200)]
Remove multiple input option (was not doing what it said) and added the
possibility to pass the output on the cmd line.

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Tue, 21 May 2013 06:50:16 +0000 (08:50 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Thu, 16 May 2013 10:59:30 +0000 (12:59 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoFixed bug with CMakeLists and VTK
Benoît Presles [Thu, 16 May 2013 09:47:41 +0000 (11:47 +0200)]
Fixed bug with CMakeLists and VTK

11 years agoadded an option to transform vtk meshes with tool clitkTransformLandmarks
rblanc [Wed, 15 May 2013 15:01:10 +0000 (17:01 +0200)]
added an option to transform vtk meshes with tool clitkTransformLandmarks

11 years agoMade the mesh decimation optional, and tunable. If on, the resulting mesh may have...
U-PC-de-Rémi\Rémi [Tue, 7 May 2013 16:04:50 +0000 (18:04 +0200)]
Made the mesh decimation optional, and tunable. If on, the resulting mesh may have problems and can be unreadable by transformix

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Wed, 24 Apr 2013 06:21:28 +0000 (08:21 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
rblanc [Mon, 22 Apr 2013 16:47:42 +0000 (18:47 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agofusion sequence: artificially thicken the US images to avoid slices being *hidden...
rblanc [Mon, 22 Apr 2013 16:47:38 +0000 (18:47 +0200)]
fusion sequence: artificially thicken the US images to avoid slices being *hidden behind*, and fixed some errors with close/reload

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Fri, 19 Apr 2013 11:22:58 +0000 (13:22 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoApply log before casting back to pixel type
Vivien Delmon [Thu, 18 Apr 2013 15:48:45 +0000 (17:48 +0200)]
Apply log before casting back to pixel type

11 years agoRemove class instanciation in header file.
Vivien Delmon [Thu, 18 Apr 2013 15:34:10 +0000 (17:34 +0200)]
Remove class instanciation in header file.

11 years agoDeal with options --like and --spacinglike at the same time
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Deal with options --like and --spacinglike at the same time

11 years agoAdd option "spacinglike"
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add option "spacinglike"

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Mon, 8 Apr 2013 06:18:35 +0000 (08:18 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoAdd option to read Elastix transform (3D affine)
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Add option to read Elastix transform (3D affine)

11 years agoFix deprecated warning (Begin -> GoToBegin)
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
Fix deprecated warning (Begin -> GoToBegin)

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
rblanc [Tue, 2 Apr 2013 14:34:41 +0000 (16:34 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoupdated clitkBinaryImageToMesh, added the possibility to write a vtkPolyData output...
rblanc [Tue, 2 Apr 2013 14:34:33 +0000 (16:34 +0200)]
updated clitkBinaryImageToMesh, added the possibility to write a vtkPolyData output file + fixed documentation

11 years agosmall fixes in fusion sequence visualization mode
rblanc [Tue, 2 Apr 2013 13:47:30 +0000 (15:47 +0200)]
small fixes in fusion sequence visualization mode

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Tue, 2 Apr 2013 11:14:57 +0000 (13:14 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
David Sarrut [Tue, 2 Apr 2013 08:17:06 +0000 (10:17 +0200)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoadd nbewnew parameters to SliceBySliceSetBackgroundFromLineSeparation
David Sarrut [Fri, 3 Feb 2012 06:57:12 +0000 (07:57 +0100)]
add nbewnew parameters to SliceBySliceSetBackgroundFromLineSeparation

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Simon Rit [Fri, 29 Mar 2013 16:26:20 +0000 (17:26 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoMerge branch 'master' of git.creatis.insa-lyon.fr:clitk
Benoît Presles [Fri, 29 Mar 2013 15:27:49 +0000 (16:27 +0100)]
Merge branch 'master' of git.creatis.insa-lyon.fr:clitk

11 years agoadded metadata to vv
Benoît Presles [Fri, 29 Mar 2013 15:26:58 +0000 (16:26 +0100)]
added metadata to vv

11 years agoFixed mm to cm conversion and wrong section init
Simon Rit [Fri, 29 Mar 2013 11:34:52 +0000 (12:34 +0100)]
Fixed mm to cm conversion and wrong section init

11 years agoFixed problem with unsigned short
François Smekens [Wed, 20 Mar 2013 17:31:00 +0000 (18:31 +0100)]
Fixed problem with unsigned short