From 7ed35ae93a3f84b76e0fe91fa75b411c73ee2dd6 Mon Sep 17 00:00:00 2001 From: David Sarrut Date: Thu, 9 Feb 2017 10:09:17 +0100 Subject: [PATCH] allow to merge hdr also --- cluster_tools/gate_power_merge.sh | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/cluster_tools/gate_power_merge.sh b/cluster_tools/gate_power_merge.sh index aaf063b..fa2904a 100755 --- a/cluster_tools/gate_power_merge.sh +++ b/cluster_tools/gate_power_merge.sh @@ -51,9 +51,9 @@ END { print xsize * ysize * zsize * byte_per_pixel; }' "${input_interfile}") function write_mhd_header { local input_interfile="${1:?"provide input interfile"}" - local output_mhd="$(dirname "${input_interfile}")/$(basename "${input_interfile}" ".hdr").mhd" + local output_mhd="$(dirname "${input_interfile}")/$(basename "${input_interfile}" ".hdr").hdr.mhd" - check_interfile "${input_interfile}" || error "${input_interfile} isn't an interfile image" + check_interfile "${input_interfile}" || warning "${input_interfile} isn't an interfile image (or unknown format)" local header_start='ObjectType = Image NDims = 3 @@ -334,8 +334,8 @@ function merge_dispatcher { echo "${indent}this is a interfile image" echo "${indent}creating mhd headers" for partialoutputfile in $partialoutputfiles; do write_mhd_header "${partialoutputfile}"; done - local mhd_partialoutputfiles="$(for partialoutputfile in $partialoutputfiles; do echo "${partialoutputfile%.*}.mhd"; done)" - local mhd_mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}" ".hdr").mhd" + local mhd_partialoutputfiles="$(for partialoutputfile in $partialoutputfiles; do echo "${partialoutputfile%.*}.hdr.mhd"; done)" + local mhd_mergedfile="${outputdir}/$(basename "${firstpartialoutputfile}" ".hdr").hdr.mhd" merge_mhd_image "${mhd_mergedfile}" ${mhd_partialoutputfiles} || error "error while merging" echo "${indent}cleaning mhd headers" for mhd_partialoutputfile in $mhd_partialoutputfiles; do rm "${mhd_partialoutputfile}"; done -- 2.45.1