From 60c5b5c699be63c0bba2093f3f353e415fbcec5f Mon Sep 17 00:00:00 2001
From: David Sarrut <david.sarrut@creatis.insa-lyon.fr>
Date: Thu, 29 Sep 2011 07:25:08 +0200
Subject: [PATCH] Remove VertebralBody

---
 segmentation/clitkExtractMediastinumFilter.txx | 7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/segmentation/clitkExtractMediastinumFilter.txx b/segmentation/clitkExtractMediastinumFilter.txx
index e3f83dc..312fd14 100644
--- a/segmentation/clitkExtractMediastinumFilter.txx
+++ b/segmentation/clitkExtractMediastinumFilter.txx
@@ -329,6 +329,13 @@ GenerateOutputInformation() {
     this->template StopCurrentStep<MaskImageType>(output);
   }
 
+  //--------------------------------------------------------------------
+  // Remove VertebralBody part
+  this->StartNewStep("[Mediastinum] Remove VertebralBody");  
+  MaskImagePointer VertebralBody = this->GetAFDB()->template GetImage<MaskImageType>("VertebralBody");
+  clitk::AndNot<MaskImageType>(output, VertebralBody, this->GetBackgroundValue());
+  this->template StopCurrentStep<MaskImageType>(output);
+
   //--------------------------------------------------------------------
   // Generic RelativePosition processes
   output = this->ApplyRelativePositionList("Mediastinum", output);
-- 
2.47.1