From 6d1a465f35ea7632c0f57fc2a85565547fb00295 Mon Sep 17 00:00:00 2001 From: Pierre Gueth Date: Wed, 1 Jun 2011 13:34:59 +0200 Subject: [PATCH] works on cc!!! --- cluster_tools/gate_run_submit_cluster.sh | 54 ++++++++++++++++++++++++ 1 file changed, 54 insertions(+) create mode 100755 cluster_tools/gate_run_submit_cluster.sh diff --git a/cluster_tools/gate_run_submit_cluster.sh b/cluster_tools/gate_run_submit_cluster.sh new file mode 100755 index 0000000..136a567 --- /dev/null +++ b/cluster_tools/gate_run_submit_cluster.sh @@ -0,0 +1,54 @@ +#!/bin/bash + +set -u +SCRIPTNAME="$(basename "${0}")" + +function error { +echo "ERROR: $1" +usage +exit 1 +} + +DEFAULTRELEASESUFFIX="06o" +DEFAULTNUMBEROFJOBS="10" + +function usage { +echo "${SCRIPTNAME} mac/main.mac njobs releasesuffix paramtogate" +echo "default njobs = ${DEFAULTNUMBEROFJOBS}" +echo "default releasesuffix = ${DEFAULTRELEASESUFFIX}" +} + +test $# -eq 0 && usage && exit 0 + +SCRIPTDIR=~/gate/gate-tests/bin +RELEASEDIR="${HOME}/gate/release${3:-"${DEFAULTRELEASESUFFIX}"}" +JOBFILE=~/gate/gate-tests/job_release.job + +echo "Checking stuff" +test -f ${JOBFILE} || error "can't find job file ${JOBFILE}" +test -d ${RELEASEDIR} || error "invalid release dir ${RELEASEDIR}" +MACRODIR=$(pwd) +test -d ${MACRODIR}/mac && test -d ${MACRODIR}/data || error "invalid path" +MACROFILE=${1:?"provide relative macro path"} +test -f ${MACRODIR}/${MACROFILE} || error "invalid macro" +OUTPUTDIR=$(mktemp --tmpdir=${MACRODIR} -d run.XXXX) +test -d ${OUTPUTDIR} || error "can't locate output dir" +RUNID=${OUTPUTDIR##*.} +NJOBS=${2:-"${DEFAULTNUMBEROFJOBS}"} +NJOBSMAX=${NJOBS} +PARAM="${4:-""}" + +echo "Lets roll!!" +echo "runid is ${RUNID}" +test -z "${PARAM}" && echo "no param" || echo "param is ${PARAM}" +echo "using release $(basename ${RELEASEDIR})" +echo "submitting ${NJOBS} jobs" + +while test $NJOBS -gt 0; do + qsub -N "gatejob.${RUNID}" -o "${OUTPUTDIR}" \ + -v "PARAM=\"${PARAM}\",INDEX=${NJOBS},INDEXMAX=${NJOBSMAX},SCRIPTDIR=${SCRIPTDIR},OUTPUTDIR=${OUTPUTDIR},RELEASEDIR=${RELEASEDIR},MACROFILE=${MACROFILE},MACRODIR=${MACRODIR}" \ + ${JOBFILE} || error "submission error" + let NJOBS-- +done + +echo "runid is ${RUNID}" -- 2.47.1