From 6e51473017c0c79d2178e275f04cc27d8bb9a3cd Mon Sep 17 00:00:00 2001
From: rblanc <rblanc33@gmail.com>
Date: Tue, 2 Apr 2013 15:47:30 +0200
Subject: [PATCH 1/1] small fixes in fusion sequence visualization mode

---
 vv/vvMainWindow.cxx    | 3 ++-
 vv/vvOverlayPanel.cxx  | 8 ++++----
 vv/vvSlicerManager.cxx | 2 +-
 3 files changed, 7 insertions(+), 6 deletions(-)

diff --git a/vv/vvMainWindow.cxx b/vv/vvMainWindow.cxx
index a06870f..34e66ad 100644
--- a/vv/vvMainWindow.cxx
+++ b/vv/vvMainWindow.cxx
@@ -2474,7 +2474,7 @@ void vvMainWindow::SelectFusionSequenceCorrespondances() {
   bool signalOK = true;
   unsigned nbFrameMain = mSlicerManagers[index]->GetImage()->GetTransform().size();
   unsigned nbFrameSecondary = mSlicerManagers[index]->GetFusionSequenceNbFrames();
-
+std::cout<<"nbFrameMain = "<<nbFrameMain<<", nbFrameSecondary= "<<nbFrameSecondary<<", signal size: "<<tmpVect.size()<<std::endl;
   std::vector<unsigned> temporalCorrespondances;
   if ( tmpVect.size() == nbFrameMain + nbFrameSecondary ) {
     for (unsigned i=0 ; i<tmpVect.size() ; i++) {
@@ -2517,6 +2517,7 @@ void vvMainWindow::AddFusionSequence(int index, std::vector<std::string> fileNam
     mInputPathName = itksys::SystemTools::GetFilenamePath(file.toStdString()).c_str();
     itk::ImageIOBase::Pointer reader = itk::ImageIOFactory::CreateImageIO(
       file.toStdString().c_str(), itk::ImageIOFactory::ReadMode);
+    std::sort (fileNames.begin(), fileNames.end());//make sure the files are sorted.
     reader->SetFileName(fileNames[0].c_str());
     reader->ReadImageInformation();
     std::string component = reader->GetComponentTypeAsString(reader->GetComponentType());
diff --git a/vv/vvOverlayPanel.cxx b/vv/vvOverlayPanel.cxx
index b394bb5..3490933 100644
--- a/vv/vvOverlayPanel.cxx
+++ b/vv/vvOverlayPanel.cxx
@@ -264,7 +264,7 @@ void vvOverlayPanel::getFusionSequenceProperty(int sequenceFrameIndex, bool spat
 		fCTUSFrame->setEnabled(1);
 		fCTUSSlider->setEnabled(1);
 		fCTUSSlider->setValue(sequenceFrameIndex);
-		fCTUSSlider->setMaximum(sequenceLenth);
+		fCTUSSlider->setMaximum(sequenceLenth-1); //the maximum IS included, since we start at 0, go until n-1!
 		if (spatialSync) fCTUSActivateSpaceSyncCheckBox->setCheckState(Qt::Checked);
 		else             fCTUSActivateSpaceSyncCheckBox->setCheckState(Qt::Unchecked);		
 		if (fCTUSActivateTimeSyncCheckBox->isEnabled()) {
@@ -292,7 +292,7 @@ void vvOverlayPanel::setFusionSequenceProperty()
 {
   if (disableFusionSequenceSignals)
     return;
-  emit FusionSequencePropertyUpdated(fCTUSSlider->value(), fCTUSActivateSpaceSyncCheckBox->isChecked(), fCTUSSlider->maximum(), fCTUSActivateTimeSyncCheckBox->isChecked());
+  emit FusionSequencePropertyUpdated(fCTUSSlider->value(), fCTUSActivateSpaceSyncCheckBox->isChecked(), fCTUSSlider->maximum()+1, fCTUSActivateTimeSyncCheckBox->isChecked());
 }
 
 void vvOverlayPanel::enableFusionSequenceTemporalSync() {
@@ -303,7 +303,7 @@ void vvOverlayPanel::enableFusionSequenceTemporalSync() {
   disableFusionSequenceSignals = backup; //
 	
 	if (disableFusionSequenceSignals) return;
-	emit FusionSequencePropertyUpdated(fCTUSSlider->value(), fCTUSActivateSpaceSyncCheckBox->isChecked(), fCTUSSlider->maximum(), fCTUSActivateTimeSyncCheckBox->isChecked());
+	emit FusionSequencePropertyUpdated(fCTUSSlider->value(), fCTUSActivateSpaceSyncCheckBox->isChecked(), fCTUSSlider->maximum()+1, fCTUSActivateTimeSyncCheckBox->isChecked());
 }
 
 void vvOverlayPanel::updateFusionSequenceSliderValueFromWindow(int val, bool updateVisualization) {
@@ -314,7 +314,7 @@ void vvOverlayPanel::updateFusionSequenceSliderValueFromWindow(int val, bool upd
   disableFusionSequenceSignals = false;
 
   if (disableFusionSequenceSignals) return;
-	if (updateVisualization) emit FusionSequencePropertyUpdated(fCTUSSlider->value(), fCTUSActivateSpaceSyncCheckBox->isChecked(), fCTUSSlider->maximum(), fCTUSActivateTimeSyncCheckBox->isChecked());
+	if (updateVisualization) emit FusionSequencePropertyUpdated(fCTUSSlider->value(), fCTUSActivateSpaceSyncCheckBox->isChecked(), fCTUSSlider->maximum()+1, fCTUSActivateTimeSyncCheckBox->isChecked());
 }
 
 void vvOverlayPanel::VFColorChangeRequest()
diff --git a/vv/vvSlicerManager.cxx b/vv/vvSlicerManager.cxx
index e975da2..24ec62a 100644
--- a/vv/vvSlicerManager.cxx
+++ b/vv/vvSlicerManager.cxx
@@ -351,7 +351,7 @@ bool vvSlicerManager::SetFusionSequence(std::vector<std::string> filenames, int
 	}
 
 	//adjust the time slider in the overlay panel
-	mFusionSequenceNbFrames = mFusionSequenceReader->GetOutput()->GetTransform().size()-1; //actually, this is the maximum index...
+	mFusionSequenceNbFrames = mFusionSequenceReader->GetOutput()->GetTransform().size(); 
 	mFusionSequenceFrameIndex = std::max<int>( 0, std::min<int>(mFusionSequenceFrameIndex, mFusionSequenceNbFrames));
 
 	return true;
-- 
2.45.2