From 72f539dfd51bc89c1002adb705d592878f911167 Mon Sep 17 00:00:00 2001 From: Romulo Pinho Date: Tue, 13 Dec 2011 17:38:53 +0100 Subject: [PATCH] midp masks use new clitkExtractLung version --- scripts/create_midP_masks-2.0.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/create_midP_masks-2.0.sh b/scripts/create_midP_masks-2.0.sh index 7c84294..eb5983a 100755 --- a/scripts/create_midP_masks-2.0.sh +++ b/scripts/create_midP_masks-2.0.sh @@ -43,7 +43,7 @@ extract_bones() extract_lungs() { echo "$phase_file -> Extracting lungs..." - clitkExtractLung -i $phase_file -o $mask_dir_tmp/lungs_$phase_nb.mhd -a $afdb_file --noAutoCrop --doNotSeparateLungs + clitkExtractLung -i $phase_file -o $mask_dir_tmp/lungs_$phase_nb.mhd -a $afdb_file --noAutoCrop --doNotSeparateLungs --type 1 } -- 2.47.1