X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?p=CreaPhase.git;a=blobdiff_plain;f=octave_packages%2Fm%2Fsparse%2Fspstats.m;fp=octave_packages%2Fm%2Fsparse%2Fspstats.m;h=7d82d45202a4c6cbae40547262657e134ebcf112;hp=0000000000000000000000000000000000000000;hb=1c0469ada9531828709108a4882a751d2816994a;hpb=63de9f36673d49121015e3695f2c336ea92bc278 diff --git a/octave_packages/m/sparse/spstats.m b/octave_packages/m/sparse/spstats.m new file mode 100644 index 0000000..7d82d45 --- /dev/null +++ b/octave_packages/m/sparse/spstats.m @@ -0,0 +1,65 @@ +## Copyright (C) 2004-2012 Paul Kienzle +## +## This file is part of Octave. +## +## Octave is free software; you can redistribute it and/or modify it +## under the terms of the GNU General Public License as published by +## the Free Software Foundation; either version 3 of the License, or (at +## your option) any later version. +## +## Octave is distributed in the hope that it will be useful, but +## WITHOUT ANY WARRANTY; without even the implied warranty of +## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +## General Public License for more details. +## +## You should have received a copy of the GNU General Public License +## along with Octave; see the file COPYING. If not, see +## . + +## -*- texinfo -*- +## @deftypefn {Function File} {[@var{count}, @var{mean}, @var{var}] =} spstats (@var{S}) +## @deftypefnx {Function File} {[@var{count}, @var{mean}, @var{var}] =} spstats (@var{S}, @var{j}) +## Return the stats for the non-zero elements of the sparse matrix @var{S}. +## @var{count} is the number of non-zeros in each column, @var{mean} +## is the mean of the non-zeros in each column, and @var{var} is the +## variance of the non-zeros in each column. +## +## Called with two input arguments, if @var{S} is the data and @var{j} +## is the bin number for the data, compute the stats for each bin. In +## this case, bins can contain data values of zero, whereas with +## @code{spstats (@var{S})} the zeros may disappear. +## @end deftypefn + +function [count, mean, var] = spstats (S, j) + + if (nargin < 1 || nargin > 2) + print_usage (); + endif + + if (nargin == 1) + [i, j, v] = find (S); + else + v = S; + i = 1:length (v); + S = sparse (i, j, v); + endif + [n, m] = size (S); + + count = sum (sparse (i, j, 1, n, m)); + if (nargout > 1) + mean = sum (S) ./ count; + endif + if (nargout > 2) + ## FIXME Variance with count = 0 or 1? + diff = S - sparse (i, j, mean(j), n, m); + var = sum (diff .* diff) ./ (count - 1); + endif + +endfunction + + +%!test +%! [n,m,v] = spstats([1 2 1 2 3 4],[2 2 1 1 1 1]); +%! assert(n,sparse([4,2])); +%! assert(m,sparse([10/4,3/2]),10*eps); +%! assert(v,sparse([5/3,1/2]),10*eps);