/* # --------------------------------------------------------------------- # # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image # pour la SantÈ) # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton # Previous Authors : Laurent Guigues, Jean-Pierre Roux # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil # # This software is governed by the CeCILL-B license under French law and # abiding by the rules of distribution of free software. You can use, # modify and/ or redistribute the software under the terms of the CeCILL-B # license as circulated by CEA, CNRS and INRIA at the following URL # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html # or in the file LICENSE.txt. # # As a counterpart to the access to the source code and rights to copy, # modify and redistribute granted by the license, users are provided only # with a limited warranty and the software's author, the holder of the # economic rights, and the successive licensors have only limited # liability. # # The fact that you are presently reading this means that you have had # knowledge of the CeCILL-B license and that you accept its terms. # ------------------------------------------------------------------------ */ #ifdef _USE_VTK_ #ifndef __bbgdcmvtkGetXCoherentInfoGdcmReader_h_INCLUDED__ #define __bbgdcmvtkGetXCoherentInfoGdcmReader_h_INCLUDED__ #include "bbgdcmvtk_EXPORT.h" #include "bbtkAtomicBlackBox.h" #include "iostream" #if defined(USE_GDCM) #include "vtkGdcmReader.h" #endif #if defined(USE_GDCM2) #include "vtkGDCMImageReader.h" #endif #include "gdcmFile.h" #include "gdcmSerieHelper.h" #include "vtkImageData.h" namespace bbgdcmvtk { typedef std::map MapInfoDicom; typedef std::vector< MapInfoDicom > VectorMapInfoDicom; class bbgdcmvtk_EXPORT GetXCoherentInfoGdcmReader : public bbtk::AtomicBlackBox { BBTK_BLACK_BOX_INTERFACE(GetXCoherentInfoGdcmReader,bbtk::AtomicBlackBox); BBTK_DECLARE_INPUT(In , std::vector); BBTK_DECLARE_INPUT(IPPSort , bool); BBTK_DECLARE_INPUT(DicomTags , std::vector); BBTK_DECLARE_OUTPUT(Out , vtkImageData *); BBTK_DECLARE_OUTPUT(IPP , std::vector); BBTK_DECLARE_OUTPUT(IOP , std::vector); BBTK_DECLARE_OUTPUT(PixelSpacing , std::vector); BBTK_DECLARE_OUTPUT(DicomInfo , VectorMapInfoDicom); BBTK_PROCESS(Process); void Process(); vtkImageData* CreateDefaultImage(); private: #if defined USE_GDCM GDCM_NAME_SPACE::File *f; GDCM_NAME_SPACE::SerieHelper *sh; vtkGdcmReader *reader; #endif #if defined USE_GDCM2 vtkGDCMImageReader *reader; #endif }; //================================================================= // UserBlackBox description BBTK_BEGIN_DESCRIBE_BLACK_BOX(GetXCoherentInfoGdcmReader,bbtk::AtomicBlackBox); BBTK_NAME("GetXCoherentInfoGdcmReader"); BBTK_AUTHOR("jpr, eduardo"); BBTK_DESCRIPTION("Get Dicom info from a File Set (a list of Dicom image file names) and read (as a vtkImageData)"); BBTK_CATEGORY(""); BBTK_INPUT(GetXCoherentInfoGdcmReader,In ,"List of Dicom image file names", std::vector,""); BBTK_INPUT(GetXCoherentInfoGdcmReader,IPPSort ,"Sort on Image Position Patient", bool,""); BBTK_INPUT(GetXCoherentInfoGdcmReader,DicomTags ,"Dicom Tags (vector of Dicom tags ex: D0028_0030 D0020_0037)", std::vector,""); BBTK_OUTPUT(GetXCoherentInfoGdcmReader,Out ,"Output image" , vtkImageData *,""); BBTK_OUTPUT(GetXCoherentInfoGdcmReader,IPP ,"Image Position (Patient)" , std::vector,""); BBTK_OUTPUT(GetXCoherentInfoGdcmReader,IOP ,"Image Orientation (Patient)" , std::vector,""); BBTK_OUTPUT(GetXCoherentInfoGdcmReader,PixelSpacing ,"Pixel Spacing" , std::vector,""); BBTK_OUTPUT(GetXCoherentInfoGdcmReader,DicomInfo ,"vector of maps of Dicom tags" , VectorMapInfoDicom,""); BBTK_END_DESCRIBE_BLACK_BOX(GetXCoherentInfoGdcmReader); } // EO namespace bbgdcmvtk #endif // __bbgdcmvtkGetXCoherentInfoGdcmReader_h_INCLUDED__ #endif //_USE_VTK_