#=========================================================
# CLITK = Command Line ITK
+project(clitk)
cmake_minimum_required(VERSION 2.8)
cmake_policy(VERSION 2.8)
if(COMMAND cmake_policy)
cmake_policy(SET CMP0003 NEW)
+ cmake_policy(SET CMP0007 NEW)
+ cmake_policy(SET CMP0053 NEW)
endif(COMMAND cmake_policy)
-PROJECT(clitk)
+if(NOT DEFINED CLITK_SOURCE_DIR)
+ set(CLITK_SOURCE_DIR ${PROJECT_SOURCE_DIR})
+endif(NOT DEFINED CLITK_SOURCE_DIR)
+# Default build type
+IF(NOT CMAKE_BUILD_TYPE)
+ SET(CMAKE_BUILD_TYPE Release CACHE STRING
+ "Choose the type of build, options are: None Debug Release RelWithDebInfo MinSizeRel."
+ FORCE)
+ENDIF(NOT CMAKE_BUILD_TYPE)
#=========================================================
-#=========================================================
-INCLUDE(cmake/common.cmake)
-#=========================================================
+set(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE)
-#=========================================================
-#Support for the CTest dashboard testing system
-OPTION(BUILD_TESTING "Build the testing tree" OFF)
-IF (BUILD_TESTING)
- OPTION(CLITK_BUILD_TESTING "Test ITK" ON)
- INCLUDE(CTest)
-ENDIF(BUILD_TESTING)
-#=========================================================
+if(MSVC)
+ set( CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} /bigobj" )
+ set( CMAKE_C_FLAGS "${CMAKE_C_FLAGS} /bigobj" )
+endif(MSVC)
-#=========================================================
-# Find ITK (required)
-FIND_PACKAGE(ITK)
-IF(ITK_FOUND)
- INCLUDE("${ITK_USE_FILE}")
-ELSE(ITK_FOUND)
- MESSAGE(FATAL_ERROR "Cannot build without ITK. Please set ITK_DIR.")
-ENDIF(ITK_FOUND)
-#=========================================================
-
-#=========================================================
-# Find VTK (required)
-FIND_PACKAGE(VTK REQUIRED)
-IF(VTK_FOUND)
- INCLUDE("${VTK_USE_FILE}")
-ELSE(VTK_FOUND)
- MESSAGE(FATAL_ERROR "Please set VTK_DIR.")
-ENDIF(VTK_FOUND)
-#=========================================================
+if(${CLITK_USE_PACS_CONNECTION})
+ set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -lgdcmMEXD" )
+endif(${CLITK_USE_PACS_CONNECTION})
#=========================================================
-# Find gengetopt, will create a target exe if not found
-SET(CMAKE_MODULE_PATH "${PROJECT_SOURCE_DIR}/cmake" ${CMAKE_MODULE_PATH})
-FIND_PACKAGE(Gengetopt)
-#=========================================================
-
-#=========================================================
-# Find libstatgrab is installed, add clitkMemoryUsage.cxx in the library
-FIND_LIBRARY(LIBSTATGRAB NAMES statgrab PATHS)
-IF (${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
-# MESSAGE("Install libstatgrab (http://www.i-scream.org/libstatgrab/) for memory usage information")
- SET(CLITK_MEMORY_INFO OFF)
-ELSE (${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
- SET(CLITK_MEMORY_INFO ON)
-ENDIF (${LIBSTATGRAB} MATCHES "LIBSTATGRAB-NOTFOUND")
-#=========================================================
-
-#=========================================================
-# If the user choose to build documentation, then search for Doxygen executables.
-OPTION(BUILD_DOXYGEN "Build Doxygen Documentation" OFF)
-IF(BUILD_DOXYGEN)
- FIND_PACKAGE(Doxygen)
- ADD_SUBDIRECTORY(Doxygen)
-ENDIF(BUILD_DOXYGEN)
-#=========================================================
-
+include(${CLITK_SOURCE_DIR}/cmake/common.cmake)
+include(${CLITK_SOURCE_DIR}/cmake/dependencies.cmake)
+include(${CLITK_SOURCE_DIR}/cmake/build_opt.cmake)
#=========================================================
-# Building in the source tree is forbidden
-IF(PROJECT_BINARY_DIR STREQUAL ${PROJECT_SOURCE_DIR})
- MESSAGE(FATAL_ERROR "Building in the source tree is not allowed ! Quit; remove the file 'CMakeCache.txt' and the folder 'CMakeFiles' an
-d build outside the sources (for example 'mkdir build ; cmake <CLITK_DIR>'.")
-ENDIF(PROJECT_BINARY_DIR STREQUAL ${PROJECT_SOURCE_DIR})
#=========================================================
-
-#=========================================================
-# Remove some MS Visual c++ flags
-IF(MSVC)
- ADD_DEFINITIONS(-D_CRT_SECURE_NO_WARNINGS -D_CRT_NONSTDC_NO_DEPRECATE -D_SCL_SECURE_NO_WARNINGS)
-ENDIF(MSVC)
-#=========================================================
-
-#=========================================================
-INCLUDE_DIRECTORIES(itk filters segmentation registration tools ${PROJECT_BINARY_DIR})
-
+SET(vvPacsConnection true)
# Select what is compiled
-ADD_SUBDIRECTORY(common)
-ADD_SUBDIRECTORY(tools)
-ADD_SUBDIRECTORY(segmentation)
-ADD_SUBDIRECTORY(registration)
-
-
-# Compilation options
-OPTION(CLITK_EXPERIMENTAL "Enable experimental software and features" OFF)
-OPTION(CLITK_BUILD_TOOLS "Build command-line tools" OFF)
-OPTION(CLITK_BUILD_SEGMENTATION "Build command-line segmentation tools" OFF)
-OPTION(CLITK_BUILD_REGISTRATION "Build command-line registration tools" OFF)
-
-OPTION(CLITK_BUILD_VV "Build vv the 4D visualizer (requires VTK and QT)" ON)
-IF (CLITK_BUILD_VV)
- ADD_SUBDIRECTORY(vv)
-ENDIF(CLITK_BUILD_VV)
-
-
-#=========================================================
-# Build test when vv has been compiled
-IF(BUILD_TESTING)
- ADD_SUBDIRECTORY(tests)
-ENDIF(BUILD_TESTING)
-
-#=========================================================
-# Install scripts when running make install
-SET(SCRIPTS
- scripts/common.sh
- scripts/registration.sh
- scripts/create_midP.sh
- scripts/create_midP-2.0.sh
- scripts/create_mhd_4D.sh
- scripts/create_mhd_4D_pattern.sh
- scripts/create_midP_masks.sh
- scripts/create_midP_masks-2.0.sh
- scripts/pts_to_landmarks.sh
-)
-
-INSTALL (FILES ${SCRIPTS} DESTINATION bin PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_EXECUTE WORLD_EXECUTE)
-
+add_subdirectory(${CLITK_SOURCE_DIR}/common ${PROJECT_BINARY_DIR}/common)
+add_subdirectory(${CLITK_SOURCE_DIR}/tools ${PROJECT_BINARY_DIR}/tools)
+add_subdirectory(${CLITK_SOURCE_DIR}/segmentation ${PROJECT_BINARY_DIR}/segmentation)
+add_subdirectory(${CLITK_SOURCE_DIR}/registration ${PROJECT_BINARY_DIR}/registration)
+add_subdirectory(${CLITK_SOURCE_DIR}/cluster_tools ${PROJECT_BINARY_DIR}/cluster_tools)
git://git.creatis.insa-lyon.fr / clitk.git / blobdiff