/* # --------------------------------------------------------------------- # # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image # pour la Santé) # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton # Previous Authors : Laurent Guigues, Jean-Pierre Roux # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil # # This software is governed by the CeCILL-B license under French law and # abiding by the rules of distribution of free software. You can use, # modify and/ or redistribute the software under the terms of the CeCILL-B # license as circulated by CEA, CNRS and INRIA at the following URL # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html # or in the file LICENSE.txt. # # As a counterpart to the access to the source code and rights to copy, # modify and redistribute granted by the license, users are provided only # with a limited warranty and the software's author, the holder of the # economic rights, and the successive licensors have only limited # liability. # # The fact that you are presently reading this means that you have had # knowledge of the CeCILL-B license and that you accept its terms. # ------------------------------------------------------------------------ */ #include #include #include #if defined(USE_GDCM) #include #include #include "gdcmFile.h" #include "gdcmDocument.h" #include "gdcmFileHelper.h" #endif #if defined(USE_GDCM2) #include "gdcmGlobal.h" #include "gdcmFile.h" #include "gdcmDictPrinter.h" #include "gdcmPrinter.h" #include "gdcmReader.h" #include "gdcmSmartPointer.h" #include "gdcmSequenceOfItems.h" #endif #include "icons/save.xpm" namespace creaImageIO { // CTor WxDumpPanel::WxDumpPanel(wxWindow *parent, std::string i_filename) : wxDialog(parent, -1,_T("DICOM TAGS"), wxDefaultPosition, wxSize(550,580)), filename(i_filename) { int size = 16; mIcon = new wxImageList(size,size,true); mIcon->Add(wxBitmap(wxBitmap(wxIcon(save_xpm)).ConvertToImage().Rescale(size, size))); wxToolBar *mToolBar = new wxToolBar(this,-1,wxDefaultPosition,wxDefaultSize); mToolBar->AddTool( DUMP_SAVE_ID,_T("Save"), mIcon->GetBitmap(0), _T("Save Dicom Tags in text file")); mToolBar->Realize(); DumpText = new wxTextCtrl( this, wxID_ANY,_T(""), wxPoint(5,30), wxSize(520,510), wxTE_READONLY| wxMac | wxTE_MULTILINE | wxTE_RICH ); Layout(); Print(); } // DTor WxDumpPanel::~WxDumpPanel(){} /////////////////////////////////////////////////// /// Display in a control Text all dicom tags /////////////////////////////////////////////////// void WxDumpPanel::Print() { std::stringstream os; std::string result = ""; if ( !filename.empty()) // ====== Deal with a single file ====== { #if defined(USE_GDCM) GDCM_NAME_SPACE::File *f = GDCM_NAME_SPACE::File::New(); f->SetLoadMode(GDCM_NAME_SPACE::LD_ALL); f->SetFileName( filename ); f->SetMaxSizeLoadEntry(0xffff); f->Load(); GDCM_NAME_SPACE::FileHelper *fh = GDCM_NAME_SPACE::FileHelper::New(f); f->SetLoadMode(GDCM_NAME_SPACE::LD_NOSEQ |GDCM_NAME_SPACE::LD_NOSHADOW); fh->SetPrintLevel( 0 ); fh->Print(os); std::string line; while(std::getline(os, line)) { result +=clean(line.c_str()); result += "\n"; } #endif #if defined(USE_GDCM2) gdcm::Reader reader; reader.SetFileName( filename.c_str() ); if (reader.Read()) { gdcm::Printer printer; printer.SetFile ( reader.GetFile() ); printer.SetColor( 0 ); printer.Print( os ); result = os.str(); } //const gdcm::DataSet& ds = reader.GetFile().GetDataSet(); // // (5400,0100) SQ (Sequence with undefined length #=1) # u/l, 1 WaveformSequence // gdcm::Tag twsq(0x5400,0x0100); // bool btest = ds.FindDataElement( twsq) ; //const gdcm::DataElement &wsq = ds.GetDataElement( twsq ); // gdcm::SmartPointer sqi = wsq.GetValueAsSQ(); // int num = sqi->GetNumberOfItems(); // // const gdcm::Item & item = sqi->GetItem(1); // Item start at #1 // const gdcm::DataSet& nestedds = item.GetNestedDataSet(); // // (5400,1004) US 16 # 2, 1 WaveformBitsAllocated // gdcm::Tag twba(0x5400,0x1004); // if( !nestedds.FindDataElement( twba ) ) // { // // } // const gdcm::DataElement &wba= nestedds.GetDataElement( twba ); // //std::cout << wba << std::endl; // // (5400,1006) CS [SS] # 2, 1 WaveformSampleInterpretation // // (5400,1010) OW 00ba\0030\ff76\ff8b\00a2\ffd3\ffae\ff50\0062\00c4\011e\00c2\00ba... # 57600, 1 WaveformData // gdcm::Tag twd(0x5400,0x1010); // if( !nestedds.FindDataElement( twd ) ) // { // } // const gdcm::DataElement &wd = nestedds.GetDataElement( twd ); // const gdcm::ByteValue *bv = wd.GetByteValue(); // size_t len = bv->GetLength(); // int16_t *p = (int16_t*)bv; // // size_t npts = len / 2; // //npts = 10; // DEBUG ! // for(size_t i = 0; i < npts; ++i ) // { // float x; // x = (float)p[i]; // } //// //// gdcm::SmartPointer sqi = wsq.GetValueAsSQ(); ////if( !sqi || !sqi->GetNumberOfItems() ) //// { //// //// } //// const gdcm::Item & item = sqi->GetItem(1); // Item start at #1 //// const gdcm::DataSet& nestedds = item.GetNestedDataSet(); //// // (5400,1004) US 16 # 2, 1 WaveformBitsAllocated //// gdcm::Tag twba(0x5400,0x1004); //// if( !nestedds.FindDataElement( twba ) ) //// { //// return 0; //// } //// const gdcm::DataElement &wba= nestedds.GetDataElement( twba ); // gdcm::DataElement data = reader.GetFile().GetDataSet().GetDataElement(gdcm::Tag(0x5400,0x0100)); // std::string seq_old_begin = "(fffe,e000) na (Item with undefined length)"; // std::string seq_new_begin = ""; // boost::algorithm::replace_all(result, seq_old_begin, seq_new_begin); // std::string seq_old_end = "(fffe,e00d)"; // std::string seq_new_end = "<\\SEQ>"; // boost::algorithm::replace_all(result, seq_old_end, seq_new_end); //seq_old_end = "(fffe,e0dd)"; boost::algorithm::replace_all(result, seq_old_end, "\n"); #endif DumpText->SetValue(crea::std2wx(result)); } } const std::string WxDumpPanel::clean(const std::string &i_line) { if (i_line.substr(4,1) == "|") { std::string tag; std::string line; std::string signification; std::string value; std::string resultat; tag = "(" + i_line.substr(0,9) + ")"; line = i_line.substr(14,i_line.size()-10); int pos1 = (int)line.find_first_of("["); int pos2 = (int)line.find_first_of("]"); signification = line.substr(pos1+1, pos2-pos1-1); line = line.substr(pos2+1); pos1 = (int)line.find_first_of("["); pos2 = (int)line.find_first_of("]"); value = line.substr(pos1+1, pos2-pos1-1); resultat = tag + " " + signification + ": " +value; return resultat; } else { return i_line; } } /////////////////////////////////////////////////// /// wxEvent to save Dicom Tags in a text file // /////////////////////////////////////////////////// void WxDumpPanel::SaveInfos(wxCommandEvent& event) { wxFileDialog* FD = new wxFileDialog( 0,_T("Select file"), _T(""), _T(""), crea::std2wx("*.txt"), wxOPEN, wxDefaultPosition); if (FD->ShowModal()==wxID_OK) { wxBusyCursor busy; std::ofstream ofs(crea::wx2std(FD->GetPath()).c_str()); ofs.clear(); ofs << crea::wx2std(DumpText->GetValue());; ofs.close(); } Close(); } //////////////////////////////////////////////////////////// //////////////////////////////////////////////////////////// BEGIN_EVENT_TABLE(WxDumpPanel, wxDialog) EVT_TOOL(DUMP_SAVE_ID, WxDumpPanel::SaveInfos) END_EVENT_TABLE() }