+<!--
+ # ---------------------------------------------------------------------
+ #
+ # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
+ # pour la Santé)
+ # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
+ # Previous Authors : Laurent Guigues, Jean-Pierre Roux
+ # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
+ #
+ # This software is governed by the CeCILL-B license under French law and
+ # abiding by the rules of distribution of free software. You can use,
+ # modify and/ or redistribute the software under the terms of the CeCILL-B
+ # license as circulated by CEA, CNRS and INRIA at the following URL
+ # http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+ # or in the file LICENSE.txt.
+ #
+ # As a counterpart to the access to the source code and rights to copy,
+ # modify and redistribute granted by the license, users are provided only
+ # with a limited warranty and the software's author, the holder of the
+ # economic rights, and the successive licensors have only limited
+ # liability.
+ #
+ # The fact that you are presently reading this means that you have had
+ # knowledge of the CeCILL-B license and that you accept its terms.
+ # ------------------------------------------------------------------------
+-->
+
<?xml version="1.0" encoding="iso-8859-1"?>
<!--==========================================================================
STARTS THE DESCRIPTION OF THE BLACK BOX -->
INPUTS/OUTPUTS DECLARATION -->
<input name="Title" type="std::string" description="Title of the dialog"/>
+
+
+
<typedef>
<PRE>
- typedef std::vector<vtkImageData*> OutputImagesType;</PRE>
+ typedef std::vector<std::string> VectorStringType;</PRE>
</typedef>
+ <input name="DicomTags" type="VectorStringType" description="Dicom Tags (vector of Dicom tags ex: D0028_0030 D0020_0037)"/>
+ <typedef>
+ <PRE>
+ typedef std::vector<vtkImageData*> OutputImagesType;</PRE>
+ </typedef>
<output name="Out" type="vtkImageData*" description="The selected image"/>
<output name="OutImages" type="OutputImagesType" description="Vector of selected images"/>
+
+ <typedef>
+ <PRE>
+ typedef std::map<std::string, std::string> MapInfoDicom;</PRE>
+ </typedef>
+
+ <typedef>
+ <PRE>
+ typedef std::vector< MapInfoDicom > VectorMapInfoDicom;</PRE>
+ </typedef>
+
+ <output name="DicomInfo" type="VectorMapInfoDicom" description="vector of maps of Dicom tags"/>
+ <output name="FileName" type="std::string" description="Selected file name"/>
<!--========================================================================
PROCESS section -->
<process>
<PRE>
+
+
+
creaImageIO::WxSimpleDlg dlg(0,crea::std2wx(bbGetInputTitle()),"localdatabase_Descriptor.dscp","Local Database");
+ dlg.SetAttrDicomTags( bbGetInputDicomTags() );
dlg.ShowModal();
- if (dlg.getImagesSelected().size()!=0){
+ bbSetOutputDicomInfo( dlg.getDicomInfoImagesSelected() );
+ if (dlg.getImagesSelected().size()!=0)
+ {
+ bbSetOutputFileName( std::string( dlg.getInfoImage().mb_str() ) );
+ bbSetOutputOut( dlg.getVolumeSelected() );
+
+/*
if(dlg.getImagesSelected().size() ==1)
{
bbSetOutputOut( dlg.getImagesSelected()[0] );
- }
- else
- {
+ } else {
// FCY: it will be a big problem if we have several kind of data in the same folder.
- vtkImageData *out;
// creation of a huge vtkImageData!!!!
vtkImageData* first = dlg.getImagesSelected()[0];
- out = vtkImageData::New();
- out->SetScalarType(first->GetScalarType());
- out->SetNumberOfScalarComponents(first->GetNumberOfScalarComponents());
- int ext[6];
- first->GetWholeExtent(ext);
- if(ext[5] == 0)
- {
- ext[5] = dlg.getImagesSelected().size()-1;
- }
- else
- {
- ext[5] = ext[5] * dlg.getImagesSelected().size()-1; // to deal with multiframes
- }
- out->SetExtent(ext);
int dim[3];
- double spac[3];
first->GetDimensions(dim);
- first->GetSpacing(spac);
- out->SetSpacing(spac);
- out->SetDimensions(dim[0], dim[1], dlg.getImagesSelected().size() );
- out->AllocateScalars();
- out->Update();
- unsigned long imsize = dim[0] * dim[1];
- imsize = imsize * dim[2] ; // deal with multiframes here
- // differents formats char , short, etc...
- // differents components 1..3 ex. jpg ->RGB 3
- imsize = imsize * first->GetScalarSize() * first->GetNumberOfScalarComponents();
- int slice = 0;
- std::vector<vtkImageData*>::iterator it;
- for (it=dlg.getImagesSelected().begin(); it!=dlg.getImagesSelected().end(); ++it)
- {
- memcpy(out->GetScalarPointer(0,0,slice), (*it)->GetScalarPointer(0,0,0), imsize);
- slice++;
- }
- //for (it=dlg.getImagesSelected().begin(); it!=dlg.getImagesSelected().end(); ++it)
- //{
- // (*it)->Delete();
- //}
- bbSetOutputOut(out);
+ if (dim[2]==1){
+ vtkImageData *out;
+ out = vtkImageData::New();
+ out->SetScalarType(first->GetScalarType());
+ out->SetNumberOfScalarComponents(first->GetNumberOfScalarComponents());
+ int ext[6];
+ first->GetWholeExtent(ext);
+ if(ext[5] == 0)
+ {
+ ext[5] = dlg.getImagesSelected().size()-1;
+ } else {
+ ext[5] = ext[5] * dlg.getImagesSelected().size()-1; // to deal with multiframes
+ } // ext
+ out->SetExtent(ext);
+ double spac[3];
+ first->GetDimensions(dim);
+ first->GetSpacing(spac);
+ if (spac[0]==spac[1])
+ {
+ spac[2]=spac[0];
+ }
+ out->SetSpacing(spac);
+ out->SetDimensions(dim[0], dim[1], dlg.getImagesSelected().size() );
+ out->AllocateScalars();
+ out->Update();
+ unsigned long imsize = dim[0] * dim[1];
+ imsize = imsize * dim[2]; // deal with multiframes here
+ // differents formats char , short, etc...
+ // differents components 1..3 ex. jpg ->RGB 3
+ imsize = imsize * first->GetScalarSize() * first->GetNumberOfScalarComponents();
+ int slice,sizeImageVector=dlg.getImagesSelected().size();
+ for (slice=0 ; slice<sizeImageVector ; slice++)
+ {
+ vtkImageData *img = dlg.getImagesSelected()[slice];
+ memcpy(out->GetScalarPointer(0,0,slice), img->GetScalarPointer(0,0,0), imsize);
+ //img->Delete();
+ } // for slice
+
+//EED This is NOT working. The iteration over the pointer vtkImageData
+// int slice=0;
+// std::vector<vtkImageData*>::iterator it;
+// for (it=dlg.getImagesSelected().begin(); it!=dlg.getImagesSelected().end(); ++it)
+// {
+// memcpy(out->GetScalarPointer(0,0,slice), (*it)->GetScalarPointer(0,0,0), imsize);
+// slice++;
+// }
+// //for (it=dlg.getImagesSelected().begin(); it!=dlg.getImagesSelected().end(); ++it)
+// // {
+// // (*it)->Delete();
+// // }
+
+ bbSetOutputOut(out);
+
+ } else {
+ bbSetOutputOut(first);
+ } // dim
}
+*/
+
} else {
- bbSetOutputOut( NULL );
- }
+ bbSetOutputOut( NULL );
+ } // dlg.getImagesSelected().size()!=0
+
+
+
bbSetOutputOutImages( dlg.getImagesSelected());
+printf("EED creaImageIOWxSimpleDlg 5 \n");
</PRE>
</process>
git://git.creatis.insa-lyon.fr / creaImageIO.git / blobdiff