From: trillos <trillos>
Date: Wed, 18 Nov 2009 09:55:33 +0000 (+0000)
Subject: Added PlaneReorientation (For Muller Project)
X-Git-Tag: CREATOOLS.2-0-3~21
X-Git-Url: https://git.creatis.insa-lyon.fr/pubgit/?p=creaRigidRegistration.git;a=commitdiff_plain;h=9b89ece57878a559b17dd54f884720b6eea395ef

Added PlaneReorientation (For Muller Project)
---

diff --git a/lib/PlaneReorientation.cxx b/lib/PlaneReorientation.cxx
new file mode 100644
index 0000000..df522d5
--- /dev/null
+++ b/lib/PlaneReorientation.cxx
@@ -0,0 +1,95 @@
+#include "PlaneReorientation.h"
+
+/*
+* Constructor
+*/
+//------------------------------------------------------------
+PlaneReorientation::PlaneReorientation()
+{
+	_transform=vtkTransform::New();
+}
+
+/*
+* Destructor
+*/
+//------------------------------------------------------------
+PlaneReorientation::~PlaneReorientation()
+{
+	if (_transform != NULL ) { _transform->Delete(); }
+}
+
+void PlaneReorientation::CalculateNormal()
+{
+	normal[0]=(a[1]*b[2])-(a[2]*b[1]);
+	normal[1]=(a[2]*b[0])-(a[0]*b[2]);
+	normal[2]=(a[0]*b[1])-(a[1]*b[0]);
+
+	vtkMath::Normalize(normal);
+
+	std::cout << "Normal axis : " << "X: " << normal[0] << " Y: " << normal[1] << " Z: " << normal[2] << std::endl;
+}
+
+void PlaneReorientation::SetVectors(std::vector<int> pointsX, std::vector<int> pointsY, std::vector<int> pointsZ, std::vector<std::string> labels)
+{
+	//This part is for head reorientation using the chiasma and optical nerves
+	if(labels[0].compare("CHIASMA") == 0 || labels[1].compare("CHIASMA") == 0 || labels[2].compare("CHIASMA") == 0)
+	{
+		int i;
+		for(i = 0; i < 2; i++)
+		{
+			//Gets the point that represents the optic chiasma and sets it as the origin point
+			if(labels[i].compare("CHIASMA")==0)
+			{
+				o[0] = pointsX[i];
+				o[1] = pointsY[i];
+				o[2] = pointsZ[i];
+			}
+			//The point that represents the right eye (and subsequent first vector)
+			else if(labels[i].compare("RY")==0)
+			{
+				a[0] = pointsX[i];
+				a[1] = pointsY[i];
+				a[2] = pointsZ[i];
+			}
+			//The point that represents the left eye (and subsequent second vector)
+			else if(labels[i].compare("LY")==0)
+			{
+				b[0] = pointsX[i];
+				b[1] = pointsY[i];
+				b[2] = pointsZ[i];
+			}
+		}
+
+		//Creates the first vector
+		a[0] = a[0] - o[0];
+		a[1] = a[1] - o[1];
+		a[2] = a[2] - o[2];
+
+		//Creates the second vector
+		b[0] = b[0] - o[0];
+		b[1] = b[1] - o[1];
+		b[2] = b[2] - o[2];
+	}
+	else
+	{
+		/*First Vector*/
+		a[0] = pointsX[1]-pointsX[0];
+		a[1] = pointsY[1]-pointsY[0];
+		a[2] = pointsZ[1]-pointsZ[0];
+
+		/*Second Vector*/
+		b[0] = pointsX[2]-pointsX[0];
+		b[1] = pointsY[2]-pointsY[0];
+		b[2] = pointsZ[2]-pointsZ[0];
+	}
+}
+
+vtkTransform* PlaneReorientation::getTransform()
+{
+	return _transform;
+}
+
+void PlaneReorientation::Run()
+{
+
+}
diff --git a/lib/PlaneReorientation.h b/lib/PlaneReorientation.h
new file mode 100644
index 0000000..1c1ba6a
--- /dev/null
+++ b/lib/PlaneReorientation.h
@@ -0,0 +1,31 @@
+#include "vtkTransform.h"
+#include "vtkMath.h"
+#include "vtkMatrix4x4.h"
+#include <string>
+#include "vector"
+
+#include "iostream"
+
+class PlaneReorientation
+{
+	public:
+		//------------------//
+		//Constructors
+		//------------------//
+		PlaneReorientation();
+		~PlaneReorientation();
+
+		void SetVectors(std::vector<int> pointsX, std::vector<int> pointsY, std::vector<int> pointsZ, std::vector<std::string> labels);
+		void CalculateNormal();
+		vtkTransform* getTransform();
+
+		void Run();
+
+	private:
+		vtkTransform *_transform;
+		double a[3];
+		double b[3];
+		double o[3];
+
+		double normal[3];		
+};
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