+# ---------------------------------------------------------------------
+#
+# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
+# pour la Santé)
+# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
+#
+# This software is governed by the CeCILL-B license under French law and
+# abiding by the rules of distribution of free software. You can use,
+# modify and/ or redistribute the software under the terms of the CeCILL-B
+# license as circulated by CEA, CNRS and INRIA at the following URL
+# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+# or in the file LICENSE.txt.
+#
+# As a counterpart to the access to the source code and rights to copy,
+# modify and redistribute granted by the license, users are provided only
+# with a limited warranty and the software's author, the holder of the
+# economic rights, and the successive licensors have only limited
+# liability.
+#
+# The fact that you are presently reading this means that you have had
+# knowledge of the CeCILL-B license and that you accept its terms.
+# ------------------------------------------------------------------------
+
+
#!/bin/bash
echo "in ThirdParty-install-ITK.sh, source " $PWD/scripts/CreaTools-configure.sh
echo "------"
+#EED 2017-03-24
+ source $PWD/scripts/LocalFunctions.sh
+ if [ `getDistrib` == "CentOS" ] && [ `getKernelVersion` < "2.6.34" ]
+ then
+ stdCompiler=c++98
+ else
+ stdCompiler=c++11
+ fi
+
+
+
scriptDir=$PWD
sourcesDir=$generationdir/thirdparty_sources
binDir=$generationdir/thirdparty_bin
if [ ! -e $generationdir ]
then
- mkdir $generationdir
- chown $loginUserName $generationdir
- chgrp $loginGroupName $generationdir
+ mkdir -p $generationdir
+ chown -R $loginUserName $generationdir
+ chgrp -R $loginGroupName $generationdir
fi
if [ ! -e $sourcesDir ]
then
- mkdir $sourcesDir
+ mkdir -p $sourcesDir
#was : (pb on MacOS?)
- #chown $loginUserName:$loginGroupName $sourcesDir
- chown $loginUserName $sourcesDir
- chgrp $loginGroupName $sourcesDir
+ #chown -R $loginUserName:$loginGroupName $sourcesDir
+ chown -R $loginUserName $sourcesDir
+ chgrp -R $loginGroupName $sourcesDir
fi
if [ ! -e $binDir ]
then
- mkdir $binDir
- chown $loginUserName $binDir
- chgrp $loginGroupName $binDir
+ mkdir -p $binDir
+ chown -R $loginUserName $binDir
+ chgrp -R $loginGroupName $binDir
fi
echo "we remove old stuff"
cd $sourcesDir
echo "we download new stuff"
- if [ $ITKVersion = ITK3 ]
- then
- # deal with ITK3
- #EED itkfile=InsightToolkit-3.20.0.patchCreatis.tar.gz
- #EED libname=InsightToolkit-3.20.0
- itkfile=InsightToolkit-3.20.1.tar.gz
- libname=InsightToolkit-3.20.1
- else
- # deal with ITK4
- itkfile=ITK4.0.tgz
- libname=ITK
- fi
-
- if [ $OperatingSystem = "MacOS" ]
- then
- curl -O http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/$itkfile
- else
- wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/$itkfile
- fi
- tar -xzvf $itkfile
+# if [ $ITKVersion = ITK3 ]
+# then
+# # deal with ITK3
+# #EED itkfile=InsightToolkit-3.20.0.patchCreatis.tar.gz
+# #EED libname=InsightToolkit-3.20.0
+#
+# #EED itkfile=InsightToolkit-3.20.1.tar.gz
+# #EED libname=InsightToolkit-3.20.1
+#
+# itkfile=InsightToolkit-3.20.1-patchCreatis.tgz
+# libname=InsightToolkit-3.20.1-patchCreatis
+#
+# else
+# # deal with ITK4
+# itkfile=InsightToolkit-4.13.1.zip
+# libname=InsightToolkit-4.13.1
+# fi
+
+ itkfile=InsightToolkit-5.0.1.zip
+ libname=InsightToolkit-5.0.1
+
+
+## if [ $OperatingSystem = "MacOS" ]
+## then
+## curl -O http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/$itkfile
+## else
+## ##EED19mai2015 wget http://www.creatis.insa-lyon.fr/software/public/creatools/crea_ThirdParty_Libraries/source/$itkfile
+## wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/$itkfile
+## ## tar -xzvf $itkfile
+## fi
+
+ wget http://www.creatis.insa-lyon.fr/~davila/creatools_back_site/crea_ThirdParty_Libraries/source/$itkfile
+ unzip $itkfile
#fi # JPR ------------1
dirInstall=$binDir/$libname-Bin
export ITK_DIR=$installPrefixThird/lib/InsightToolkit/
- mkdir $dirInstall
+ mkdir -p $dirInstall
cd $dirInstall
cmake -G"Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
##cmake -G"CodeBlocks - Unix Makefiles" -H$sourcesDir/$libname -B$dirInstall/
- cmake -D USE_DEBUG_LIB:BOOL=$buildType -D CMAKE_INSTALL_PREFIX:PATH=$installPrefixThird CMakeCache.txt
- cmake -D BUILD_EXAMPLES:BOOL=OFF -D BUILD_TESTING:BOOL=OFF -D BUILD_SHARED_LIBS:BOOL=ON -D ITK_USE_REVIEW:BOOL=ON CMakeCache.txt
- if [ $ITKVersion = ITK4 ]
- then
- cmake -D ITKV3_COMPATIBILITY:BOOL=ON -D ITKGroup_Nonunit:BOOL=ON -D ITKGroup_IO:BOOL=ON -D Module_ITK-Deprecated:BOOL=ON -D Module_ITK-Review:BOOL=ON CMakeCache.txt
- fi
+ cmake -D CMAKE_BUILD_TYPE:STRING=$buildType -D CMAKE_INSTALL_PREFIX:PATH=$installPrefixThird CMakeCache.txt
+ cmake -D BUILD_SHARED_LIBS:BOOL=ON -D BUILD_EXAMPLES:BOOL=OFF -D BUILD_TESTING:BOOL=OFF CMakeCache.txt
+# if [ $ITKVersion = ITK3 ]
+# then
+# cmake -D ITK_USE_REVIEW:BOOL=ON CMakeCache.txt
+# fi
+# if [ $ITKVersion = ITK4 ]
+# then
+###EED ITK4.0
+## cmake -D ITKV3_COMPATIBILITY:BOOL=ON -D ITKGroup_Nonunit:BOOL=ON -D ITKGroup_IO:BOOL=ON -D Module_ITK-Deprecated:BOOL=ON -D Module_ITK-Review:BOOL=ON CMakeCache.txt
+#
+###EED ITK4.12
+## -D ITK_USE_SYSTEM_GDCM=ON
+# cmake -D ITKV3_COMPATIBILITY:BOOL=ON -D Module_ITKReview:BOOL=ON CMakeCache.txt
+# fi
+
+ cmake -D Module_ITKReview:BOOL=ON CMakeCache.txt
+ cmake -D CMAKE_CXX_FLAGS:STRING=-std=${stdCompiler} CMakeCache.txt
+
#uncomment following line if you want to use the bleeding edge of GDCM2!
#cmake -D ITK_USE_SYSTEM_GDCM:BOOL=ON CMakeCache.txt
cmake CMakeCache.txt
make -j $corenumber
- make install
+ make -j $corenumber install
cd ..
fi
git://git.creatis.insa-lyon.fr / creaToolsTools.git / blobdiff