/*========================================================================= Program: gdcm Module: $RCSfile: TestCopyDicom.cxx,v $ Language: C++ Date: $Date: 2007/10/30 09:13:45 $ Version: $Revision: 1.44 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notices for more information. =========================================================================*/ #include "gdcmFile.h" #include "gdcmFileHelper.h" #include "gdcmDataEntry.h" //Generated file: #include "gdcmDataImages.h" // return true if the file exists bool FileExists(const char *filename); bool RemoveFile(const char *source); int CopyDicom(std::string const &filename, std::string const &output ) { std::cout << " Testing: " << filename << std::endl; if( FileExists( output.c_str() ) ) { if( !RemoveFile( output.c_str() ) ) { std::cout << "Ouch, the file exist, but I cannot remove it" << std::endl; return 1; } } //////////////// Step 1: std::cout << " 1..."; GDCM_NAME_SPACE::File *originalH = GDCM_NAME_SPACE::File::New(); GDCM_NAME_SPACE::File *copyH = GDCM_NAME_SPACE::File::New(); originalH->SetFileName( filename ); originalH->Load( ); //First of all copy the file, field by field //////////////// Step 2: std::cout << "2..."; GDCM_NAME_SPACE::DocEntry *d=originalH->GetFirstEntry(); while(d) { if ( GDCM_NAME_SPACE::DataEntry *de = dynamic_cast(d) ) { copyH->InsertEntryBinArea( de->GetBinArea(),de->GetLength(), de->GetGroup(),de->GetElement(), de->GetVR() ); } else { // We skip pb of SQ recursive exploration } d=originalH->GetNextEntry(); } GDCM_NAME_SPACE::FileHelper *original = GDCM_NAME_SPACE::FileHelper::New(originalH); GDCM_NAME_SPACE::FileHelper *copy = GDCM_NAME_SPACE::FileHelper::New(copyH); size_t dataSize = original->GetImageDataSize(); uint8_t *imageData = original->GetImageData(); // Useless to set the image data, because it's already made when // copying the corresponding DataEntry that contains the pixel data // --> FIXME : Why do we let the following line? // to avoid compile time warnings? copy->SetImageData(imageData, dataSize); //////////////// Step 3: std::cout << "3..."; copy->SetWriteModeToRGB(); if( !copy->WriteDcmExplVR(output) ) { std::cout << " Failed" << std::endl << " " << output << " not written" << std::endl; original->Delete(); copy->Delete(); originalH->Delete(); copyH->Delete(); return 1; } copy->Delete(); copyH->Delete(); //////////////// Step 4: std::cout << "4..."; // copy = new GDCM_NAME_SPACE::FileHelper( output ); copy = GDCM_NAME_SPACE::FileHelper::New(output); // ??? //Is the file written still gdcm parsable ? if ( !copy->GetFile()->IsReadable() ) { std::cout << " Failed" << std::endl << " " << output << " not readable" << std::endl; original->Delete(); originalH->Delete(); return 1; } //////////////// Step 5: std::cout << "5..."; size_t dataSizeWritten = copy->GetImageDataSize(); uint8_t *imageDataWritten = copy->GetImageData(); if (dataSize != dataSizeWritten) { std::cout << " Failed" << std::endl << " Pixel areas lengths differ: " << dataSize << " # " << dataSizeWritten << std::endl; original->Delete(); copy->Delete(); originalH->Delete(); return 1; } if (int res = memcmp(imageData, imageDataWritten, dataSize) !=0) { (void)res; std::cout << " Failed" << std::endl << " Pixel differ (as expanded in memory)." << std::endl; original->Delete(); copy->Delete(); originalH->Delete(); return 1; } std::cout << "OK." << std::endl ; original->Delete(); copy->Delete(); originalH->Delete(); return 0; } // Here we load a gdcmFile and then try to create from scratch a copy of it, // copying field by field the dicom image int TestCopyDicom(int argc, char *argv[]) { if ( argc == 3 ) { // The test is specified a specific filename, use it instead of looping // over all images const std::string input = argv[1]; const std::string reference = argv[2]; return CopyDicom( input, reference ); } else if ( argc > 3 || argc == 2 ) { std::cout << " Usage: " << argv[0] << " (no arguments needed)." << std::endl; std::cout << "or Usage: " << argv[0] << " filename.dcm reference.dcm" << std::endl; return 1; } // else other cases: std::cout << " Description (Test::TestCopyDicom): " << std::endl; std::cout << " For all images in gdcmData (and not blacklisted in " "Test/CMakeLists.txt)" << std::endl; std::cout << " apply the following to each filename.xxx: " << std::endl; std::cout << " step 1: parse the image (as gdcmFile) and call" << " IsReadable(). After that, call GetImageData() and " << "GetImageDataSize() " << std::endl; std::cout << " step 2: create a copy of the readed file and the new" << " pixel data are set to the copy" << std::endl; std::cout << " step 3: write the copy of the image" << std::endl; std::cout << " step 4: read the copy and call IsReadable()" << std::endl; std::cout << " step 5: compare (in memory with memcmp) that the two " << "images " << std::endl << " match (as expanded by gdcm)." << std::endl; std::cout << std::endl; int i =0; int retVal = 0; //by default this is an error while( gdcmDataImages[i] != 0 ) { std::string filename = GDCM_DATA_ROOT; filename += "/"; //doh! filename += gdcmDataImages[i]; std::string output = "output.dcm"; if( CopyDicom( filename, output ) != 0 ) { retVal++; } i++; } return retVal; }