/*========================================================================= Program: gdcm Module: $RCSfile: vtkgdcmViewer.cxx,v $ Language: C++ Date: $Date: 2011/03/29 07:36:02 $ Version: $Revision: 1.33 $ Copyright (c) CREATIS (Centre de Recherche et d'Applications en Traitement de l'Image). All rights reserved. See Doc/License.txt or http://www.creatis.insa-lyon.fr/Public/Gdcm/License.html for details. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the above copyright notices for more information. =========================================================================*/ // This example illustrates how the vtkGdcmReader vtk class can be // used in order to: // * produce a simple (vtk based) Dicom image STACK VIEWER. // * dump the stack considered as a volume in a vtkStructuredPoints // vtk file: the vtk gdcm wrappers can be seen as a simple way to convert // a stack of Dicom images into a native vtk volume. // // Usage: // * the filenames of the Dicom images constituting the stack should be // given as command line arguments, // * you can navigate through the stack by hitting any character key, // * the produced vtk file is named "foo.vtk" (in the invocation directory). // //---------------------------------------------------------------------------- #include #include #include #include #include #include #include #include #include "vtkGdcmReader.h" #include "gdcmDocument.h" // for NO_SHADOWSEQ #ifndef vtkFloatingPointType #define vtkFloatingPointType float #endif //---------------------------------------------------------------------------- // Callback for the interaction class vtkgdcmObserver : public vtkCommand { public: virtual char const *GetClassName() const { return "vtkgdcmObserver"; } static vtkgdcmObserver *New() { return new vtkgdcmObserver; } vtkgdcmObserver() { this->ImageViewer = NULL; } virtual void Execute(vtkObject *, unsigned long event, void* ) { if ( this->ImageViewer ) { if ( event == vtkCommand::CharEvent ) { int max = ImageViewer->GetWholeZMax(); int slice = (ImageViewer->GetZSlice() + 1 ) % ++max; ImageViewer->SetZSlice( slice ); ImageViewer->Render(); } } } vtkImageViewer *ImageViewer; }; int main(int argc, char *argv[]) { if( argc < 2 ) return 0; vtkGdcmReader *reader = vtkGdcmReader::New(); reader->AllowLookupTableOff(); if( argc == 2 ) reader->SetFileName( argv[1] ); else for(int i=1; i< argc; i++) reader->AddFileName( argv[i] ); // TODO : allow user to choose Load Mode reader->SetLoadMode(GDCM_NAME_SPACE::LD_NOSHADOWSEQ); reader->Update(); std::cout << "[0][0]==========" << reader->GetOutput()->GetScalarComponentAsFloat(0,0,0,0) << "====================" << std::endl; std::cout << "[127][127]==========" << reader->GetOutput()->GetScalarComponentAsFloat(0,127,0,0) << "====================" << std::endl; //print debug info: reader->GetOutput()->Print( cout ); vtkRenderWindowInteractor *iren = vtkRenderWindowInteractor::New(); vtkImageViewer *viewer = vtkImageViewer::New(); if( reader->GetLookupTable() ) { //convert to color: vtkImageMapToColors *map = vtkImageMapToColors::New (); map->SetInput (reader->GetOutput()); map->SetLookupTable (reader->GetLookupTable()); map->SetOutputFormatToRGB(); viewer->SetInput ( map->GetOutput() ); map->Delete(); } else { // For a single medical image, it would be more efficient to use // 0028|1050 [DS] [Window Center] // 0028|1051 [DS] [Window Width] // but vtkgdcmReader doesn't know about them :-( vtkFloatingPointType *range = reader->GetOutput()->GetScalarRange(); viewer->SetColorLevel (0.5 * (range[1] + range[0])); viewer->SetColorWindow (range[1] - range[0]); viewer->SetInput ( reader->GetOutput() ); } viewer->SetupInteractor (iren); //vtkFloatingPointType *range = reader->GetOutput()->GetScalarRange(); //viewer->SetColorWindow (range[1] - range[0]); //viewer->SetColorLevel (0.5 * (range[1] + range[0])); // Here is where we setup the observer, vtkgdcmObserver *obs = vtkgdcmObserver::New(); obs->ImageViewer = viewer; iren->AddObserver(vtkCommand::CharEvent,obs); obs->Delete(); //viewer->Render(); iren->Initialize(); iren->Start(); //if you wish you can export dicom to a vtk file vtkStructuredPointsWriter *writer = vtkStructuredPointsWriter::New(); writer->SetInput( reader->GetOutput()); writer->SetFileName( "foo.vtk" ); writer->SetFileTypeToBinary(); //writer->Write(); std::cout << "==========" << std::endl; std::cout << "==========" << reader->GetOutput()->GetScalarComponentAsFloat(0,0,0,0) << "====================" << std::endl; reader->Delete(); iren->Delete(); viewer->Delete(); writer->Delete(); return 0; }