#3184 BBTK Feature New Normal - In GetXCoherentInfoGdcmReader box extract Dicom...

[bbtk.git] / packages / gdcmvtk / src / bbgdcmvtkGetXCoherentInfoGdcmReader.h

diff --git a/packages/gdcmvtk/src/bbgdcmvtkGetXCoherentInfoGdcmReader.h b/packages/gdcmvtk/src/bbgdcmvtkGetXCoherentInfoGdcmReader.h
index e509431b32c1de8d1ec6cff918119d0478d0a1c5..f0b3c2134f78e455b5feaa81c6b2dfc5d73a2547 100644 (file)
--- a/packages/gdcmvtk/src/bbgdcmvtkGetXCoherentInfoGdcmReader.h
+++ b/packages/gdcmvtk/src/bbgdcmvtkGetXCoherentInfoGdcmReader.h
@@ -1,3 +1,29 @@
+/*
+# ---------------------------------------------------------------------
+#
+# Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
+#                        pour la SantÈ)
+# Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
+# Previous Authors : Laurent Guigues, Jean-Pierre Roux
+# CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
+#
+#  This software is governed by the CeCILL-B license under French law and
+#  abiding by the rules of distribution of free software. You can  use,
+#  modify and/ or redistribute the software under the terms of the CeCILL-B
+#  license as circulated by CEA, CNRS and INRIA at the following URL
+#  http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
+#  or in the file LICENSE.txt.
+#
+#  As a counterpart to the access to the source code and  rights to copy,
+#  modify and redistribute granted by the license, users are provided only
+#  with a limited warranty  and the software's author,  the holder of the
+#  economic rights,  and the successive licensors  have only  limited
+#  liability.
+#
+#  The fact that you are presently reading this means that you have had
+#  knowledge of the CeCILL-B license and that you accept its terms.
+# ------------------------------------------------------------------------ */
+
 #ifdef _USE_VTK_
 
 #ifndef __bbgdcmvtkGetXCoherentInfoGdcmReader_h_INCLUDED__
@@ -6,6 +32,7 @@
 #include "bbgdcmvtk_EXPORT.h"
 #include "bbtkAtomicBlackBox.h"
 #include "iostream"
+
 #if defined(USE_GDCM)
 #include "vtkGdcmReader.h"
 #endif
@@ -17,53 +44,64 @@
 #include "gdcmFile.h"
 #include "gdcmSerieHelper.h"
 
+#include "vtkImageData.h"
 namespace bbgdcmvtk
 {
+       typedef std::map<std::string, std::string>      MapInfoDicom;
+       typedef std::vector< MapInfoDicom >             VectorMapInfoDicom;
 
 class bbgdcmvtk_EXPORT GetXCoherentInfoGdcmReader
  : 
    public bbtk::AtomicBlackBox
 {
+
   BBTK_BLACK_BOX_INTERFACE(GetXCoherentInfoGdcmReader,bbtk::AtomicBlackBox);
 
-  BBTK_DECLARE_INPUT(In,            std::vector<std::string>);
-  BBTK_DECLARE_INPUT(IPPSort,       bool);
+  BBTK_DECLARE_INPUT(In                                , std::vector<std::string>);
+  BBTK_DECLARE_INPUT(IPPSort           , bool);
+  BBTK_DECLARE_INPUT(DicomTags         , std::vector<std::string>);
   
-  BBTK_DECLARE_OUTPUT(Out,          vtkImageData *);
-  BBTK_DECLARE_OUTPUT(IPP,          std::vector<double>);
-  BBTK_DECLARE_OUTPUT(IOP,          std::vector<double>);
-  BBTK_DECLARE_OUTPUT(PixelSpacing, std::vector<double>);
+  BBTK_DECLARE_OUTPUT(Out                      , vtkImageData *);
+  BBTK_DECLARE_OUTPUT(IPP                      , std::vector<double>);
+  BBTK_DECLARE_OUTPUT(IOP                      , std::vector<double>);
+  BBTK_DECLARE_OUTPUT(PixelSpacing     , std::vector<double>);
+  BBTK_DECLARE_OUTPUT(DicomInfo                , VectorMapInfoDicom);
        
   BBTK_PROCESS(Process);
   void Process();
   
+       vtkImageData* CreateDefaultImage();
+
+
   private:
 
 #if defined USE_GDCM
-                 GDCM_NAME_SPACE::File *f;
-                 GDCM_NAME_SPACE::SerieHelper *sh;
-             vtkGdcmReader *reader;
+               GDCM_NAME_SPACE::File *f;
+               GDCM_NAME_SPACE::SerieHelper *sh;
+               vtkGdcmReader *reader;
 #endif
 #if defined USE_GDCM2
-                 vtkGDCMImageReader *reader;
+               vtkGDCMImageReader *reader;
 #endif
 };
 
   //=================================================================
   // UserBlackBox description
 BBTK_BEGIN_DESCRIBE_BLACK_BOX(GetXCoherentInfoGdcmReader,bbtk::AtomicBlackBox);
-BBTK_NAME("GetXCoherentInfoGdcmReader");
-BBTK_AUTHOR("jpr, eduardo");
-BBTK_DESCRIPTION("Get Dicom info from a File Set (a list of Dicom image file names) and read (as a vtkImageData)");
-BBTK_CATEGORY("");
-
-BBTK_INPUT(GetXCoherentInfoGdcmReader,In,     "List of Dicom image file names", std::vector<std::string>,"");
-BBTK_INPUT(GetXCoherentInfoGdcmReader,IPPSort,"Sort on Image Position Patient",bool,"");
-
-BBTK_OUTPUT(GetXCoherentInfoGdcmReader,Out,         "Output image",                vtkImageData *,"");
-BBTK_OUTPUT(GetXCoherentInfoGdcmReader,IPP,         "Image Position (Patient)",    std::vector<double>,"");
-BBTK_OUTPUT(GetXCoherentInfoGdcmReader,IOP,         "Image Orientation (Patient)", std::vector<double>,"");
-BBTK_OUTPUT(GetXCoherentInfoGdcmReader,PixelSpacing,"Pixel Spacing",               std::vector<double>,"");
+  BBTK_NAME("GetXCoherentInfoGdcmReader");
+  BBTK_AUTHOR("jpr, eduardo");
+  BBTK_DESCRIPTION("Get Dicom info from a File Set (a list of Dicom image file names) and read (as a vtkImageData)");
+  BBTK_CATEGORY("");
+
+  BBTK_INPUT(GetXCoherentInfoGdcmReader,In                             ,"List of Dicom image file names", std::vector<std::string>,"");
+  BBTK_INPUT(GetXCoherentInfoGdcmReader,IPPSort                        ,"Sort on Image Position Patient", bool,"");
+  BBTK_INPUT(GetXCoherentInfoGdcmReader,DicomTags              ,"Dicom Tags (vector of Dicom tags ex: D0028_0030  D0020_0037)", std::vector<std::string>,"");
+
+  BBTK_OUTPUT(GetXCoherentInfoGdcmReader,Out                   ,"Output image"                                 , vtkImageData *,"");
+  BBTK_OUTPUT(GetXCoherentInfoGdcmReader,IPP                   ,"Image Position (Patient)"             , std::vector<double>,"");
+  BBTK_OUTPUT(GetXCoherentInfoGdcmReader,IOP                   ,"Image Orientation (Patient)"  , std::vector<double>,"");
+  BBTK_OUTPUT(GetXCoherentInfoGdcmReader,PixelSpacing  ,"Pixel Spacing"                                , std::vector<double>,"");
+  BBTK_OUTPUT(GetXCoherentInfoGdcmReader,DicomInfo             ,"vector of maps of Dicom tags" , VectorMapInfoDicom,"");
 BBTK_END_DESCRIBE_BLACK_BOX(GetXCoherentInfoGdcmReader);
 } // EO namespace bbgdcmvtk