vv/vvToolTest.cxx

   1 /*=========================================================================
   2   Program:   vv                     http://www.creatis.insa-lyon.fr/rio/vv
   3
   4   Authors belong to:
   5   - University of LYON              http://www.universite-lyon.fr/
   6   - Léon Bérard cancer center       http://www.centreleonberard.fr
   7   - CREATIS CNRS laboratory         http://www.creatis.insa-lyon.fr
   8
   9   This software is distributed WITHOUT ANY WARRANTY; without even
  10   the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
  11   PURPOSE.  See the copyright notices for more information.
  12
  13   It is distributed under dual licence
  14
  15   - BSD        See included LICENSE.txt file
  16   - CeCILL-B   http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
  17   ===========================================================================**/
  18
  19 // vv
  20 #include "vvToolTest.h"
  21 #include "vvSlicerManager.h"
  22 #include "vvSlicer.h"
  23 #include "vvToolInputSelectorWidget.h"
  24
  25 // clitk
  26 #include "clitkBinarizeImageGenericFilter.h"
  27
  28 // vtk
  29 #include <vtkImageActor.h>
  30 #include <vtkCamera.h>
  31 #include <vtkImageClip.h>
  32 #include <vtkRenderWindow.h>
  33 #include <vtkPolyDataMapper.h>
  34 #include <vtkRenderer.h>
  35 #include <vtkSphereSource.h>
  36 #include <vtkProperty.h>
  37
  38 #include <itkGDCMImageIO.h>
  39
  40 //------------------------------------------------------------------------------
  41 // Create the tool and automagically (I like this word) insert it in
  42 // the main window menu.
  43 ADD_TOOL(vvToolTest);
  44 //------------------------------------------------------------------------------
  45
  46
  47 //------------------------------------------------------------------------------
  48 void vvToolTest::Initialize()
  49 { cout << __func__ << endl;
  50   SetToolName("Test");
  51   SetToolMenuName("Test");
  52   SetToolIconFilename(":/common/icons/binarize.png");
  53   SetToolTip("try to display a sphere.");
  54 }
  55 //------------------------------------------------------------------------------
  56
  57
  58 //------------------------------------------------------------------------------
  59 vvToolTest::vvToolTest(vvMainWindowBase * parent, Qt::WindowFlags f)
  60   :vvToolWidgetBase(parent,f),
  61    vvToolBase<vvToolTest>(parent),
  62    Ui::vvToolTest()
  63 { cout << __func__ << endl;
  64   // GUI Initialization
  65
  66   // Connect signals & slots
  67
  68   // Main filter
  69   mFilter = clitk::BinarizeImageGenericFilter::New();
  70
  71   // Set how many inputs are needed for this tool
  72   AddInputSelector("Select one image", mFilter);
  73 }
  74 //------------------------------------------------------------------------------
  75
  76
  77 //------------------------------------------------------------------------------
  78 vvToolTest::~vvToolTest()
  79 { cout << __func__ << endl;
  80 }
  81 //------------------------------------------------------------------------------
  82
  83
  84 //------------------------------------------------------------------------------
  85 /*
  86 void vvToolTest::InteractiveDisplayToggled(bool b)
  87 { cout << __func__ << endl;
  88   mInteractiveDisplayIsEnabled = b;
  89   if (!mInteractiveDisplayIsEnabled) {
  90     RemoveVTKObjects();
  91   } else {
  92     for(unsigned int i=0; i<mImageContour.size(); i++) {
  93       mImageContour[i]->ShowActors();
  94       if (mRadioButtonLowerThan->isChecked())
  95         mImageContourLower[i]->ShowActors();
  96     }
  97     if (mCurrentSlicerManager)
  98       mCurrentSlicerManager->Render();
  99   }
 100 }
 101 */
 102 //------------------------------------------------------------------------------
 103
 104
 105 //------------------------------------------------------------------------------
 106
 107 //------------------------------------------------------------------------------
 108
 109
 110 //------------------------------------------------------------------------------
 111 bool vvToolTest::close()
 112 { cout << __func__ << endl;
 113   return vvToolWidgetBase::close();
 114 }
 115 //------------------------------------------------------------------------------
 116
 117
 118 //------------------------------------------------------------------------------
 119
 120 //------------------------------------------------------------------------------
 121
 122
 123 //------------------------------------------------------------------------------
 124 void vvToolTest::reject()
 125 { cout << __func__ << endl;
 126   // DD("vvToolBinarize::reject");
 127   return vvToolWidgetBase::reject();
 128 }
 129 //------------------------------------------------------------------------------
 130
 131
 132 //------------------------------------------------------------------------------
 133
 134 //------------------------------------------------------------------------------
 135
 136
 137 //------------------------------------------------------------------------------
 138
 139 //------------------------------------------------------------------------------
 140
 141
 142 //------------------------------------------------------------------------------
 143
 144 void vvToolTest::InputIsSelected(vvSlicerManager * m)
 145 { cout << __func__ << endl;
 146   mCurrentSlicerManager = m;
 147
 148
 149   vtkSmartPointer<vtkSphereSource> sphereSource =
 150       vtkSmartPointer<vtkSphereSource>::New();
 151   sphereSource->SetCenter(0, 0, 0);
 152   //sphereSource->SetCenter(235.351, 175.781, 141.0);
 153   sphereSource->SetRadius(10.0);
 154   sphereSource->Update();
 155   vtkSmartPointer<vtkPolyDataMapper> sphereMapper =
 156       vtkSmartPointer<vtkPolyDataMapper>::New();
 157   sphereMapper->SetInputConnection(sphereSource->GetOutputPort());
 158   vtkSmartPointer<vtkActor> sphereActor =
 159       vtkSmartPointer<vtkActor>::New();
 160   sphereActor->SetMapper(sphereMapper);
 161   sphereActor->GetProperty()->SetColor(1.0, 0.0, 0.0);
 162   sphereActor->GetProperty()->SetOpacity(0.995);
 163   sphereActor->SetPosition(235.351, 175.781, -10);
 164
 165
 166   // VTK Renderer
 167   vtkSmartPointer<vtkRenderer> sphereRenderer =
 168       vtkSmartPointer<vtkRenderer>::New();
 169   // Add Actor to renderer
 170   for(int i=0;i<mCurrentSlicerManager->GetNumberOfSlicers(); i++) {
 171     mCurrentSlicerManager->GetSlicer(i)->GetRenderer()->AddActor(sphereActor);
 172   }
 173   //sphereRenderer->AddActor(sphereActor); //mettre le vvSlicer
 174
 175   // VTK/Qt wedded
 176   //this->qvtkWidgetLeft->GetRenderWindow()->AddRenderer(leftRenderer);
 177
 178
 179
 180
 181
 182   // VTK objects for interactive display
 183   valueChangedT1();
 184
 185   //connect(mThresholdSlider1, SIGNAL(valueChanged(double)), this, SLOT(valueChangedT1()));
 186
 187   connect(mCurrentSlicerManager,SIGNAL(UpdateSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
 188   connect(mCurrentSlicerManager,SIGNAL(UpdateTSlice(int,int)),this,SLOT(UpdateSlice(int, int)));
 189
 190   connect(mCurrentSlicerManager,SIGNAL(UpdateOrientation(int,int)),this,SLOT(UpdateSlice(int, int)));
 191
 192   //  connect(mCurrentSlicerManager, SIGNAL(LeftButtonReleaseSignal(int)), SLOT(LeftButtonReleaseEvent(int)));
 193   //InteractiveDisplayToggled(mInteractiveDisplayIsEnabled);
 194
 195
 196
 197 typedef signed short InputPixelType;
 198 const unsigned int Dimension = 3;
 199 typedef itk::Image< InputPixelType, Dimension > InputImageType;
 200 typedef itk::ImageFileReader< InputImageType > ReaderType;
 201 ReaderType::Pointer reader = ReaderType::New();
 202 reader->SetFileName( "/home/tbaudier/BJ13/RTSTRUCT/1.2.840.113704.1.111.4140.1439902720.30/20160201/160325.000000_/2.16.840.1.113669.1919.1454339005/2.16.840.1.113669.1919.1454339005/1.2.840.10008.5.1.4.1.1.481.3.1454339000.dcm" );
 203 typedef itk::GDCMImageIO ImageIOType;
 204 ImageIOType::Pointer gdcmImageIO = ImageIOType::New();
 205 reader->SetImageIO( gdcmImageIO );
 206 try
 207 {
 208 reader->Update();
 209 }
 210 catch (itk::ExceptionObject & e)
 211 {
 212 std::cerr << "exception in file reader " << std::endl;
 213 std::cerr << e.GetDescription() << std::endl;
 214 std::cerr << e.GetLocation() << std::endl;
 215 return;
 216 }
 217
 218 }
 219 //------------------------------------------------------------------------------
 220
 221
 222 //------------------------------------------------------------------------------
 223 // void vvToolBinarize::LeftButtonReleaseEvent(int slicer) {
 224 //   DD("LeftButtonReleaseEvent");
 225 //   for(int i=0; i<mCurrentSlicerManager->GetNumberOfSlicers(); i++) {
 226 //     if (i == slicer);
 227 //     mCurrentSlicerManager->GetSlicer(i)->GetRenderWindow()->Render();
 228 //   }
 229 // }
 230 //------------------------------------------------------------------------------
 231
 232
 233 //------------------------------------------------------------------------------
 234 void vvToolTest::apply()
 235 { cout << __func__ << endl;
 236   if (!mCurrentSlicerManager) close();
 237   QApplication::setOverrideCursor(QCursor(Qt::WaitCursor));
 238   //GetArgsInfoFromGUI();
 239
 240   // Main filter
 241
 242
 243
 244   // Output
 245   QApplication::restoreOverrideCursor();
 246   close();
 247 }
 248 //------------------------------------------------------------------------------
 249
 250 //------------------------------------------------------------------------------
 251 void vvToolTest::UpdateSlice(int slicer,int slices)
 252 { cout << __func__ << endl;
 253   Update(slicer);
 254 }
 255 //------------------------------------------------------------------------------
 256
 257 //------------------------------------------------------------------------------
 258 void vvToolTest::Update(int slicer)
 259 { cout << __func__ << endl;
 260   if (!mCurrentSlicerManager) close();
 261   mCurrentSlicerManager->Render();
 262   //mImageContour[slicer]->Update(mThresholdSlider1->GetValue());
 263 }
 264 //------------------------------------------------------------------------------
 265
 266 //------------------------------------------------------------------------------
 267 /* void vvToolTest::GetArgsInfoFromGUI()
 268 { cout << __func__ << endl;
 269
 270   /* //KEEP THIS FOR READING GGO FROM FILE
 271      int argc=1;
 272      std::string a = "toto";
 273      char * const* argv = new char*;
 274      //a.c_str();
 275      struct cmdline_parser_params p;
 276      p.check_required = 0;
 277      int good = cmdline_parser_ext(argc, argv, &args_info, &p);
 278      DD(good);
 279   */
 280 /*  cmdline_parser_clitkBinarizeImage_init(&mArgsInfo); // Initialisation to default
 281   bool inverseBGandFG = false;
 282
 283   mArgsInfo.lower_given = 1;
 284   mArgsInfo.lower_arg = mThresholdSlider1->GetValue();
 285   if (mRadioButtonLowerThan->isChecked()) {
 286     mArgsInfo.upper_given = 1;
 287     mArgsInfo.upper_arg = mThresholdSlider2->GetValue();
 288     if (mArgsInfo.upper_arg<mArgsInfo.lower_arg) {
 289       mArgsInfo.upper_given = 0;
 290       DD("TODO : lower thres greater than greater thres ! Ignoring ");
 291     }
 292   }
 293
 294   mArgsInfo.fg_arg = mFGSlider->GetValue();
 295   mArgsInfo.bg_arg = mBGSlider->GetValue();
 296
 297   if (inverseBGandFG) {
 298     mArgsInfo.fg_arg = mFGSlider->GetValue();
 299     mArgsInfo.bg_arg = mBGSlider->GetValue();
 300   }
 301   mArgsInfo.fg_given = 1;
 302   mArgsInfo.bg_given = 1;
 303
 304   if (mCheckBoxUseBG->isChecked()) {
 305     if (mCheckBoxUseFG->isChecked()) mArgsInfo.mode_arg = (char*)"both";
 306     else mArgsInfo.mode_arg = (char*)"BG";
 307   } else mArgsInfo.mode_arg = (char*)"FG";
 308
 309   mArgsInfo.verbose_flag = false;
 310
 311   // // Required (even if not used)
 312   // mArgsInfo.input_given = 0;
 313   // mArgsInfo.output_given = 0;
 314
 315   // mArgsInfo.input_arg = new char;
 316   // mArgsInfo.output_arg = new char;
 317 } */
 318 //------------------------------------------------------------------------------
 319
 320
 321 //------------------------------------------------------------------------------
 322 void vvToolTest::valueChangedT1()
 323 { cout << __func__ << endl;
 324   //  DD("valueChangedT1");
 325   if (!mCurrentSlicerManager) close();
 326   for(int i=0;i<mCurrentSlicerManager->GetNumberOfSlicers(); i++) {
 327     //mImageContour[i]->Update(v);
 328   }
 329   mCurrentSlicerManager->Render();
 330 }
 331 //------------------------------------------------------------------------------