1 #include "bbSlicerResampleImageBRAINS.h"
2 #include "bbSlicerPackage.h"
5 BBTK_ADD_BLACK_BOX_TO_PACKAGE ( Slicer, ResampleImageBRAINS )
6 BBTK_BLACK_BOX_IMPLEMENTATION ( ResampleImageBRAINS, bbtk::AtomicBlackBox );
8 void ResampleImageBRAINS::Process ( ) {
13 std::string lib = "/home/riveros/.slicer/Slicer4-bin/Slicer-build/lib/Slicer-4.0/cli-modules/libBRAINSResampleLib.so";
14 char * _argv[ ] = { Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--inputVolume" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputinputVolume( ) ) ) ,"@@@@@"," --inputVolume ") ),
15 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--referenceVolume" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputreferenceVolume( ) ) ) ,"@@@@@"," --referenceVolume ") ),
16 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--outputVolume" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputoutputVolume( ) ) ) ,"@@@@@"," --outputVolume ") ),
17 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--pixelType" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputpixelType( ) ) ) ,"@@@@@"," --pixelType ") ),
18 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--deformationVolume" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputdeformationVolume( ) ) ) ,"@@@@@"," --deformationVolume ") ),
19 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--warpTransform" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputwarpTransform( ) ) ) ,"@@@@@"," --warpTransform ") ),
20 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--interpolationMode" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputinterpolationMode( ) ) ) ,"@@@@@"," --interpolationMode ") ),
21 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--inverseTransform" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputinverseTransform( ) ) ) ,"@@@@@"," --inverseTransform ") ),
22 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--defaultValue" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputdefaultValue( ) ) ) ,"@@@@@"," --defaultValue ") ),
23 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--gridSpacing" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputgridSpacing( ) ) ) ,"@@@@@"," --gridSpacing ") ),
24 Mthd::Aux::toCharArrray( Mthd::Aux::toString( "--numberOfThreads" ) + Mthd::Aux::replace_str ( ( Mthd::Aux::toString( bbGetInputnumberOfThreads( ) ) ) ,"@@@@@"," --numberOfThreads ") ) };
27 this->execute( lib, _argc, _argv );
31 void ResampleImageBRAINS::execute ( std::string lib, int _argc, char * _argv[] ) {
32 void* handle = dlopen( lib.c_str( ), RTLD_NOW | RTLD_GLOBAL );
34 std::cerr << "CAN'T OPEN LIBRARY: " << dlerror( ) << '\n';
37 typedef int (*method_t )( int argc, char * argv[] );
41 method_t myMethod = ( method_t ) dlsym( handle, "ModuleEntryPoint" );
42 const char *dlsym_error = dlerror( );
44 std::cerr << "CAN'T LOAD SYMBOL 'ModuleEntryPoint':" << dlsym_error << '\n';
49 myMethod( _argc, _argv );
54 void ResampleImageBRAINS::bbUserSetDefaultValues ( ) {
57 void ResampleImageBRAINS::bbUserInitializeProcessing ( ) {
60 void ResampleImageBRAINS::bbUserFinalizeProcessing ( ) {
63 // EO namespace bbSlicer