lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.h

   1 #ifndef __wxContourMainFrame_h_INCLUDED_H__
   2 #define __wxContourMainFrame_h_INCLUDED_H__
   3
   4
   5 // -----------------------------------------------------------------------------------------------------------
   6 // WX headers inclusion.
   7 // For compilers that support precompilation, includes <wx/wx.h>.
   8 // -----------------------------------------------------------------------------------------------------------
   9
  10 #include <wx/wxprec.h>
  11 #ifdef __BORLANDC__
  12 #pragma hdrstop
  13 #endif
  14 #ifndef WX_PRECOMP
  15 #include <wx/wx.h>
  16 #endif
  17
  18
  19 //------------------------------------------------------------------------------------------------------------
  20 // Includes
  21 //------------------------------------------------------------------------------------------------------------
  22 #include "wx/aui/aui.h"
  23
  24 #include "interfMainPanel.h"
  25 #include "KernelManagerContour.h"
  26
  27 //#include "wxVtkBaseView_SceneManager.h"
  28 #include "wxInstantChooserPanel.h"
  29 #include "wxContourViewPanel.h"
  30
  31 //#include "ContourWorkspace.h"
  32 #include "ContourExtractData.h"
  33 #include "PerformingOperation.h"
  34
  35 #include "manualLineControler.h"
  36 #include "manualContourModelLine.h"
  37 #include "manualViewLine.h"
  38
  39 #include "ThresholdImageView.h"
  40 #include "ThresholdImageViewPanel.h"
  41 #include "ColorLayerImageView.h"
  42 #include "ColorLayerImageViewPanel.h"
  43
  44
  45 //ITK
  46 #include "itkImage.h"
  47 #include "itkGeodesicActiveContourLevelSetImageFilter.h"
  48
  49 #include "itkCurvatureAnisotropicDiffusionImageFilter.h"
  50 #include "itkGradientMagnitudeRecursiveGaussianImageFilter.h"
  51 #include "itkSigmoidImageFilter.h"
  52 #include "itkFastMarchingImageFilter.h"
  53 #include "itkRescaleIntensityImageFilter.h"
  54 #include "itkBinaryThresholdImageFilter.h"
  55 #include "itkZeroCrossingImageFilter.h"
  56 #include "itkCastImageFilter.h"
  57
  58 #include "itkImageFileWriter.h"
  59
  60 #include "itkImageToVTKImageFilter.h"
  61 #include "itkVTKImageToImageFilter.h"
  62
  63 //VTK
  64 #include <vtkImageSeedConnectivity.h>
  65 #include <vtkImageMarchingCubes.h>
  66 #include "vtkContourFilter.h"
  67 #include "vtkMarchingContourFilter.h"
  68 #include "vtkPolyDataConnectivityFilter.h"
  69 #include "vtkCleanPolyData.h"
  70 #include "vtkImageReslice.h"
  71 #include "vtkMetaImageWriter.h"
  72 #include "vtkImageData.h"
  73 #include "vtkTransform.h"
  74
  75 #include "vtkCamera.h"
  76 #include "vtkImageActor.h"
  77 #include <vtkImageMapToColors.h>
  78 #include <vtkLookupTable.h>
  79 #include <vtkCommand.h>
  80
  81 //#include "vtkMetaImageReader.h"
  82
  83 //------------------------------------------------------------------------------------------------------------
  84 // Events declaration
  85 //------------------------------------------------------------------------------------------------------------
  86
  87 //BEGIN_DECLARE_EVENT_TYPES()
  88 //END_DECLARE_EVENT_TYPES()
  89
  90 /** file wxContourMainFrame.h */
  91
  92
  93 //------------------------------------------------------------------------------------------------------------
  94 // Class definition
  95 //------------------------------------------------------------------------------------------------------------
  96 class interfMainPanel;
  97 class wxContourMainFrame : public wxPanel {
  98
  99         public:
 100
 101         //------------------------------------------------------------------------------------------------------------
 102         // Constructors & Destructors
 103         //------------------------------------------------------------------------------------------------------------
 104
 105
 106         wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER);
 107         wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER,std::string datadir="C:/Creatis/creaContoursBin/RelWithDebInfo/");
 108
 109         ~wxContourMainFrame();
 110
 111         //------------------------------------------------------------------------------------------------------------
 112         // Creational and initialization methods
 113         //------------------------------------------------------------------------------------------------------------
 114
 115         void setVectImages(std::vector<vtkImageData*> imgs);
 116
 117         bool configurePanels( );
 118
 119         bool addNewPanel(wxPanel* panel);
 120
 121         wxAuiNotebook * createNotebook();
 122
 123         void createInstantChooserPanel(wxAuiNotebook * parent);
 124
 125         void createViewPanel(wxAuiNotebook * parent);
 126
 127         void createInstantChooserPanel(wxWindow * parent);
 128
 129         void createViewPanel(wxWindow * parent);
 130
 131         void setInstantChooserPanel(  wxInstantChooserPanel * theInstantChooserPanel );
 132
 133         void getMaskValue(vtkImageData ** mask,vtkImageData ** value,int typeContourGroup, int selection, int minZ, int maxZ);
 134
 135         void SaveImageResult(std::string directory,std::string namefile, vtkImageData* mask,vtkImageData* value);
 136
 137         void ShowToolsPanel(bool show);
 138
 139
 140         ////------------------------------------------------------------------------------------------------------------
 141         //// Methods for capturing events
 142         ////------------------------------------------------------------------------------------------------------------
 143
 144
 145         ////------------------------------------------------------------------------------------------------------------
 146         ////  Model management methods
 147         ////------------------------------------------------------------------------------------------------------------
 148
 149
 150         //------------------------------------------------------------------------------------------------------------
 151         //  Attributes getters and setters
 152         //------------------------------------------------------------------------------------------------------------
 153         static wxContourMainFrame* getInstance(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER, std::string datadir="C:/Creatis/creaContoursBin/RelWithDebInfo/");
 154         static wxContourMainFrame* getInstance();
 155         static void resetInstance();
 156
 157         //------------------------------------------------------------------------------------------------------------
 158         //  Other functional methods
 159         //------------------------------------------------------------------------------------------------------------
 160
 161         /*
 162         ** This method returns the vector of images selected by the user
 163         **      return value std::vector<vtkImageData*>
 164         */
 165         std::vector<vtkImageData*> getVectImages();
 166
 167         /**
 168         **      This methods connect the event in the class interfMainPanel with the world of the appli
 169         **/
 170         void onCreateContourSpline( );
 171         void onCreateContourRectangle( );
 172         void onCreateContourCircle( );
 173         void onCreateContourLine( );
 174         void onCreateContourPoints( );
 175         void onCreateContourPolygon( );
 176         void onCreateContourBullEye(wxPanel* pan);
 177         /////////////////////////////////
 178         void onDeleteContour();
 179         void deleteContours( std::vector<std::string>  keyNamesVector );
 180         void deleteContour( std::string theKeyName );
 181         void onDeleteContoursActSlice();
 182         void onDeleteAllContours();
 183         void deleteAllContours();
 184         void setConceptValue( std::string name, int value );
 185         ConceptDataWrap* getLastConceptData();
 186         bool getIfConceptCheckedAt( std::string name, int pos );
 187
 188         void changeInstant();
 189
 190         int getNamesWrappingSize();
 191
 192         std::string getNameWrapping(int i);
 193
 194         void updateInstantOutlines();
 195         void updateInstantImageData();
 196         void updateInstantAxes();
 197
 198         void onChangeDeep(int val);
 199
 200 ///////////////////////////
 201         void onCopy();
 202         void onPaste();
 203         void onUndo();
 204         void onRedo();
 205         void createCopyContourOf ( std::string anExistingKName, std::vector<int> &instantNoTouchData, bool append );
 206         void createMirrorContourOf ( std::string anExistingKName, std::vector<int> &instantNoTouchData, bool append );
 207 ///////////////////////7
 208         void onLoad();
 209         void onSave();
 210         void onImport();
 211         void onTest();
 212         void openContours( FILE *pFile, FILE *pFileData, bool staticContour );
 213
 214         void RefreshInterface();
 215
 216         vtkImageData* getImageData();
 217
 218         void onSegmentationOneSlice(int isovalue,int sampling,int method);
 219         void onSegmentationOneSliceITK(wxString distance, wxString sigma, wxString alfa, wxString beta, wxString propagation, wxString iterations, wxString inflation);
 220         void SegmentationOneSlice( int x, int y, int z, int isovalue, int sampling, int method );
 221         void SegmentationOneSliceITK(int x, int y, int z, wxString distance, wxString sigma, wxString alfa, wxString beta, wxString propagation, wxString iterations, wxString inflation);
 222         void Mirror( int x, int y, int z, int isovalue, int sampling, int method );
 223         int  GetImageDataSizeZ();
 224         void GetImageDataRange(double *range);
 225         void onSegmentationAllSlice(int minZ,int maxZ,int isovalue,int sampling,int method);
 226
 227         //AD
 228         void referenceLine();
 229         void refLineHide();
 230         void refLineShow();
 231         void refLineChangeWidth(int width);
 232
 233         //AD
 234         void onMirror();
 235
 236
 237 //====================================================================================================
 238
 239         void showAxis(bool show);
 240         void onRigidPressed();
 241         void onWidthOfContour(double width);
 242         int getColorWindow();
 243         int getWindowLevel();
 244         void onBrigthnessColorWindowLevel(int colorwindow,int windowlevel);
 245         void onInterpolation(bool interpolate);
 246         void onChangeInstant(std::string name,int actual);
 247         void resetAppend();
 248         void onSpreadAdd();
 249         void onSpreadGo(int type);
 250         void getInstantVector(std::vector<int>& tempVector);
 251         std::vector<std::string> getOutlinesName(int slide);
 252
 253         //
 254         //
 255         // @param typeContourGroup - int The operation id (AND,OR,XOR,ALL=3)
 256         //
 257         void onInformationContourLabels(int typeContourGroup,int selection,int minimumZ,int maximumZ,int grayRangeMin, int grayRangeMax);
 258         void onSaveResults(std::string directory,std::string namefile, std::string filename,
 259                 int typeContourGroup, int selection, int minZ, int maxZ, bool XYZValues, bool contourImage, bool statistics);
 260         void SaveValuesXYZ(std::string directory,std::string namefile, int typeContourGroup);
 261         void onChangeInstantInstantPanel(std::string name,int value, int minshow, int maxshow);
 262         void onSnakePressed();
 263         void saveFileWithContoursAutomatique();
 264         void ShowResultImages(int typeContourGroup, int selection, int minZ, int maxZ );
 265         wxPanel *getMaskImageViewPanel(wxWindow *parent);
 266         void SetContourGroup(int contourGroup);
 267         wxPanel *getThresholdImageViewPanel(wxWindow *parent);
 268         wxPanel *getColorLayerImageViewPanel(wxWindow *parent);
 269
 270
 271 //CMRU 17-08-09-----------------------------------------------------------------------------------------------
 272
 273         /**
 274         * Associates the String parameter with the contour
 275         * @param label Label entered by the user
 276         * @param manualBaseModel Currently selected contour
 277         */
 278         void onPrintLabel (wxString label, manualBaseModel* manualModel);
 279
 280         /**
 281         * Calculates the size of the contour received as a parameter. Uses the measure of a pixel in millimeters.
 282         * @param manualBaseModel Currently selected contour
 283         */
 284         void onInsertCalculation(manualBaseModel* manualModel);
 285
 286         /**
 287         * Assigns and returns the value of a pixel in millimeters
 288         @ param value Measure of the pixel in millimeters
 289         */
 290         double onePixelSize(double value);
 291
 292         /**
 293         * Returns the type of the currently selected contour
 294         */
 295         int getType();
 296
 297         /**
 298         * Returns the size in pixels of the currently selected contour
 299         */
 300         double getContourSizeInPixels();
 301
 302         /**
 303         * Returns the currently selected contour. If no contour is selected returns NULL
 304         */
 305         manualBaseModel* getContour();
 306
 307         /**
 308         * Returns the Path of the data persistence file
 309         */
 310         std::string GetFileLocation();
 311
 312         /**
 313         * Assign a new path to the data persistence file
 314         @ param newFileLocation New path of the file
 315         */
 316         void SetFileLocation(std::string newFileLocation);
 317 //------------------------------------------------------------------------------------------------------------
 318
 319         void SetScalarRange(int grayRangeMin, int grayRangeMax);
 320
 321 //------------------------------------------------------------------------------------------------------------
 322
 323 private:
 324         //------------------------------------------------------------------------------------------------------------
 325         //  Private methods
 326         //------------------------------------------------------------------------------------------------------------
 327
 328
 329         //------------------------------------------------------------------------------------------------------------
 330         // Attributtes
 331         //------------------------------------------------------------------------------------------------------------
 332
 333         int _contourGroup;
 334         static wxContourMainFrame   *instance;
 335         KernelManagerContour        *kernelManager;
 336         interfMainPanel             *_pannew;
 337         PerformingOperation         *_performingOperation;
 338         std::string                 _datadir;
 339         wxContourViewPanel          *_theViewPanel;
 340         wxInstantChooserPanel       *_instantPanel;
 341
 342         //AD: 03-09: This attributes represents the reference line that is going to be used for the mirroring
 343         manualLineControler         *_refLineControl;
 344         manualContourModelLine      *_refLineModel;
 345         manualViewLine              *_refLineView;
 346
 347         wxAuiManager                m_mgr;
 348         wxAuiNotebook               *notebook;
 349     long                        m_notebook_style;
 350     long                        m_notebook_theme;
 351     int                         _numberOfVariablesStatistics;
 352
 353         // Contour Image Mask
 354         ThresholdImageView                      *_viewMaskImage;
 355         ThresholdImageViewPanel         *_viewMaskImagePanel;
 356
 357         // Threshold Image
 358         ThresholdImageView                      *_viewThresholdImage;
 359         ThresholdImageViewPanel         *_viewThresholdImagePanel;
 360
 361         // Color Layer Image
 362         ColorLayerImageView                     *_viewColorLayerImage;
 363         ColorLayerImageViewPanel        *_viewColorLayerImagePanel;
 364         std::vector<vtkImageData*>  _images;
 365         bool                        _actorPresent;
 366
 367     // temporary variables readding .roi file
 368     int             _tmpReadFileImageDim[3];
 369         double          _tmpReadFileImageSpac[3];
 370     int             _tmpReadFileTypeOfTransformation;
 371     void readDimSpc(FILE *pFile);
 372
 373
 374         /*DECLARE_CLASS(wxContourMainFrame)
 375         // any class wishing to process wxWindows events must use this macro
 376         DECLARE_EVENT_TABLE()*/
 377         bool                        _creatingContoursActive;
 378 ////////JCP 21 - 11 - 08
 379         void createContour( int typeContour );
 380         //manualContourModel * factoryManualContourModel(int typeContour);
 381         manualBaseModel * factoryManualContourModel(wxPanel* panel);
 382         ContourExtractData              *_contourextractdata;
 383
 384         void saveState();
 385         void loadState(std::string filename);
 386         void loadContours( FILE *pFile, bool staticContour );
 387         void saveFileWithContours( std::string filename );
 388         void onLoadContours(std::string fileNameContourROI);
 389
 390         int                         inredo;
 391         int                         inundo;
 392         std::string                     stundoredo;
 393         static char                 COPY;
 394
 395 //CMRU 17-08-09-----------------------------------------------------------------------------------------------
 396         wxWindow                    *infoWin2;
 397         wxPanel                     *calibrationPanel;
 398         wxPanel                     *calibrationPanelError;
 399         double                      _onePixelSize;
 400         std::string                 _imageLocation;
 401         std::string                 _fileLocation;
 402 //------------------------------------------------------------------------------------------------------------
 403
 404 };
 405
 406 #endif